RNA–Protein interactions for RNA: ENST00000498713.1

ANKRD28-214, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-214ENST00000498713 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
ANKRD28-214ENST00000498713 ATMINO43313 823 aaPredicted RBP16.11■□□□□ 0.17
ANKRD28-214ENST00000498713 FAM163AQ96GL9 167 aaPredicted RBP16.08■□□□□ 0.16
ANKRD28-214ENST00000498713 MS4A3Q96HJ5 214 aa16.06■□□□□ 0.16
ANKRD28-214ENST00000498713 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
ANKRD28-214ENST00000498713 MNX1P50219 401 aaPredicted RBP16.01■□□□□ 0.15
ANKRD28-214ENST00000498713 SCUBE2Q9NQ36 999 aa16.01■□□□□ 0.15
ANKRD28-214ENST00000498713 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
ANKRD28-214ENST00000498713 POTEFA5A3E0 1075 aa15.87■□□□□ 0.13
ANKRD28-214ENST00000498713 CDAN1Q8IWY9 1227 aa15.86■□□□□ 0.13
ANKRD28-214ENST00000498713 BMP2KQ9NSY1 1161 aaPredicted RBP15.73■□□□□ 0.11
ANKRD28-214ENST00000498713 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
ANKRD28-214ENST00000498713 SPDYE4A6NLX3 237 aa15.7■□□□□ 0.1
ANKRD28-214ENST00000498713 KIF12Q96FN5 646 aa15.68■□□□□ 0.1
ANKRD28-214ENST00000498713 TSPYL2Q9H2G4 693 aaPredicted RBP15.67■□□□□ 0.1
ANKRD28-214ENST00000498713 TRPC6Q9Y210 931 aa15.65■□□□□ 0.1
ANKRD28-214ENST00000498713 COLQQ9Y215 455 aaPredicted RBP15.63■□□□□ 0.09
ANKRD28-214ENST00000498713 TIE1P35590 1138 aa15.62■□□□□ 0.09
ANKRD28-214ENST00000498713 ST18O60284 1047 aa15.58■□□□□ 0.08
ANKRD28-214ENST00000498713 MMRN1Q13201 1228 aa15.58■□□□□ 0.08
ANKRD28-214ENST00000498713 SEC24BO95487 1268 aa15.54■□□□□ 0.08
ANKRD28-214ENST00000498713 SPNS2Q8IVW8 549 aa15.52■□□□□ 0.08
ANKRD28-214ENST00000498713 TTLL13PA6NNM8 815 aa15.51■□□□□ 0.07
ANKRD28-214ENST00000498713 MAP3K13O43283 966 aa15.51■□□□□ 0.07
ANKRD28-214ENST00000498713 IER5LQ5T953 404 aa15.47■□□□□ 0.07
ANKRD28-214ENST00000498713 SLAIN1Q8ND83 568 aa15.47■□□□□ 0.07
ANKRD28-214ENST00000498713 TRIM35Q9UPQ4 493 aa15.39■□□□□ 0.05
ANKRD28-214ENST00000498713 TMEM121BQ9BXQ6 578 aaPredicted RBP15.36■□□□□ 0.05
ANKRD28-214ENST00000498713 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
ANKRD28-214ENST00000498713 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
ANKRD28-214ENST00000498713 SGIP1Q9BQI5 828 aa15.28■□□□□ 0.04
ANKRD28-214ENST00000498713 PROM2Q8N271 834 aa15.26■□□□□ 0.03
ANKRD28-214ENST00000498713 PLCG2P16885 1265 aa15.21■□□□□ 0.03
ANKRD28-214ENST00000498713 PCDHB13Q9Y5F0 798 aa15.2■□□□□ 0.02
ANKRD28-214ENST00000498713 MARVELD3Q96A59 401 aa15.18■□□□□ 0.02
ANKRD28-214ENST00000498713 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
ANKRD28-214ENST00000498713 SNPHO15079 494 aa15.17■□□□□ 0.02
ANKRD28-214ENST00000498713 IRX5P78411 483 aaPredicted RBP15.17■□□□□ 0.02
ANKRD28-214ENST00000498713 TMEM106CQ9BVX2 250 aa15.12■□□□□ 0.01
ANKRD28-214ENST00000498713 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
ANKRD28-214ENST00000498713 IFNL1Q8IU54 200 aa15.11■□□□□ 0.01
ANKRD28-214ENST00000498713 MIER1Q8N108 512 aa15.06■□□□□ 0
ANKRD28-214ENST00000498713 KRTAP3-3Q9BYR6 98 aa15.06■□□□□ 0
ANKRD28-214ENST00000498713 KRTAP3-2Q9BYR7 98 aa15.06■□□□□ 0
ANKRD28-214ENST00000498713 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.05■□□□□ -0
ANKRD28-214ENST00000498713 OCEL1Q9H607 264 aa15.03■□□□□ -0
ANKRD28-214ENST00000498713 EMP3P54852 163 aa14.99□□□□□ -0.01
ANKRD28-214ENST00000498713 POTEB3A0JP26 581 aa14.97□□□□□ -0.01
ANKRD28-214ENST00000498713 POTEBQ6S5H4 581 aa14.97□□□□□ -0.01
ANKRD28-214ENST00000498713 NUBP1P53384 320 aa14.95□□□□□ -0.02
ANKRD28-214ENST00000498713 HS3ST6Q96QI5 342 aa14.95□□□□□ -0.02
ANKRD28-214ENST00000498713 FAM205CA6NFA0 338 aa14.87□□□□□ -0.03
ANKRD28-214ENST00000498713 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
ANKRD28-214ENST00000498713 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
ANKRD28-214ENST00000498713 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
ANKRD28-214ENST00000498713 C3orf67Q6ZVT6 689 aa14.79□□□□□ -0.04
ANKRD28-214ENST00000498713 PDCD7Q8N8D1 485 aaKnown RBP14.79□□□□□ -0.04
ANKRD28-214ENST00000498713 L3MBTL3Q96JM7 780 aaPredicted RBP14.7□□□□□ -0.06
ANKRD28-214ENST00000498713 RNF166Q96A37 237 aaPredicted RBP14.68□□□□□ -0.06
ANKRD28-214ENST00000498713 PCDHB8Q9UN66 801 aa14.65□□□□□ -0.06
ANKRD28-214ENST00000498713 PYGBP11216 843 aa14.63□□□□□ -0.07
ANKRD28-214ENST00000498713 HOXB3P14651 431 aaPredicted RBP14.58□□□□□ -0.08
ANKRD28-214ENST00000498713 MKRN3Q13064 507 aaKnown RBP14.55□□□□□ -0.08
ANKRD28-214ENST00000498713 HOXB1P14653 301 aaPredicted RBP14.54□□□□□ -0.08
ANKRD28-214ENST00000498713 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
ANKRD28-214ENST00000498713 DCAF8Q5TAQ9 597 aa14.52□□□□□ -0.09
ANKRD28-214ENST00000498713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.09
ANKRD28-214ENST00000498713 GOLGA2Q08379 1002 aa14.5□□□□□ -0.09
ANKRD28-214ENST00000498713 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
ANKRD28-214ENST00000498713 ERBB3P21860 1342 aa14.48□□□□□ -0.09
ANKRD28-214ENST00000498713 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
ANKRD28-214ENST00000498713 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
ANKRD28-214ENST00000498713 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
ANKRD28-214ENST00000498713 DPY19L2Q6NUT2 758 aa14.4□□□□□ -0.1
ANKRD28-214ENST00000498713 DOK7Q18PE1 504 aa14.39□□□□□ -0.11
ANKRD28-214ENST00000498713 VARS2Q5ST30 1063 aaKnown RBP14.38□□□□□ -0.11
ANKRD28-214ENST00000498713 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
ANKRD28-214ENST00000498713 PTGER2P43116 358 aa14.35□□□□□ -0.11
ANKRD28-214ENST00000498713 PSEN1P49768 467 aa14.33□□□□□ -0.12
ANKRD28-214ENST00000498713 ZNF687Q8N1G0 1237 aa14.32□□□□□ -0.12
ANKRD28-214ENST00000498713 G3V3G9 751 aa14.28□□□□□ -0.12
ANKRD28-214ENST00000498713 RIMBP2O15034 1052 aa14.27□□□□□ -0.13
ANKRD28-214ENST00000498713 CHRM1P11229 460 aaPredicted RBP14.27□□□□□ -0.13
ANKRD28-214ENST00000498713 GSE1Q14687 1217 aa14.22□□□□□ -0.13
ANKRD28-214ENST00000498713 ZSWIM6Q9HCJ5 1215 aa14.21□□□□□ -0.13
ANKRD28-214ENST00000498713 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
ANKRD28-214ENST00000498713 GPR153Q6NV75 609 aa14.15□□□□□ -0.14
ANKRD28-214ENST00000498713 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
ANKRD28-214ENST00000498713 ANKRD13DQ6ZTN6 518 aa14.12□□□□□ -0.15
ANKRD28-214ENST00000498713 PLA2G2EQ9NZK7 142 aa14.1□□□□□ -0.15
ANKRD28-214ENST00000498713 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
ANKRD28-214ENST00000498713 LSM11P83369 360 aaKnown RBP eCLIP14.05□□□□□ -0.16
ANKRD28-214ENST00000498713 MICALL2Q8IY33 904 aa13.97□□□□□ -0.17
ANKRD28-214ENST00000498713 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.17
ANKRD28-214ENST00000498713 ARSIQ5FYB1 569 aa13.96□□□□□ -0.17
ANKRD28-214ENST00000498713 HCSTQ9UBK5 93 aa13.95□□□□□ -0.18
ANKRD28-214ENST00000498713 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
ANKRD28-214ENST00000498713 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
ANKRD28-214ENST00000498713 PBX2P40425 430 aa13.88□□□□□ -0.19
ANKRD28-214ENST00000498713 FKBP8Q14318 412 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms