RNA–Protein interactions for RNA: ENST00000498713.1

ANKRD28-214, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-214ENST00000498713 AEBP2Q6ZN18 517 aaPredicted RBP33.56■■■□□ 2.96
ANKRD28-214ENST00000498713 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
ANKRD28-214ENST00000498713 SENP3Q9H4L4 574 aaPredicted RBP28.76■■■□□ 2.19
ANKRD28-214ENST00000498713 PHF23Q9BUL5 403 aaPredicted RBP28.23■■■□□ 2.11
ANKRD28-214ENST00000498713 FOXD1Q16676 465 aa26.93■■□□□ 1.9
ANKRD28-214ENST00000498713 POTEDQ86YR6 584 aa26.64■■□□□ 1.86
ANKRD28-214ENST00000498713 MSH5O43196 834 aa25.58■■□□□ 1.69
ANKRD28-214ENST00000498713 PIAS4Q8N2W9 510 aaPredicted RBP24.89■■□□□ 1.58
ANKRD28-214ENST00000498713 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
ANKRD28-214ENST00000498713 ADRA2BP18089 450 aa24.26■■□□□ 1.47
ANKRD28-214ENST00000498713 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
ANKRD28-214ENST00000498713 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
ANKRD28-214ENST00000498713 MAPK8IP2Q13387 824 aaPredicted RBP22.58■■□□□ 1.21
ANKRD28-214ENST00000498713 CACNB1Q02641 598 aaPredicted RBP22.5■■□□□ 1.19
ANKRD28-214ENST00000498713 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
ANKRD28-214ENST00000498713 RNF39Q9H2S5 420 aa21.76■■□□□ 1.07
ANKRD28-214ENST00000498713 DCAF8L1A6NGE4 600 aa21.68■■□□□ 1.06
ANKRD28-214ENST00000498713 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
ANKRD28-214ENST00000498713 C1QBPQ07021 282 aaKnown RBP21.36■■□□□ 1.01
ANKRD28-214ENST00000498713 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
ANKRD28-214ENST00000498713 RNF216Q9NWF9 866 aaPredicted RBP21.02■□□□□ 0.96
ANKRD28-214ENST00000498713 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
ANKRD28-214ENST00000498713 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
ANKRD28-214ENST00000498713 POTEHQ6S545 545 aa20.67■□□□□ 0.9
ANKRD28-214ENST00000498713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
ANKRD28-214ENST00000498713 DSG3P32926 999 aa20.03■□□□□ 0.8
ANKRD28-214ENST00000498713 NCBP3Q53F19 620 aaKnown RBP19.97■□□□□ 0.79
ANKRD28-214ENST00000498713 U3KPZ7 1027 aaPredicted RBP19.9■□□□□ 0.78
ANKRD28-214ENST00000498713 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
ANKRD28-214ENST00000498713 CAPN15O75808 1086 aa19.85■□□□□ 0.77
ANKRD28-214ENST00000498713 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
ANKRD28-214ENST00000498713 ABCB7O75027 752 aa19.31■□□□□ 0.68
ANKRD28-214ENST00000498713 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
ANKRD28-214ENST00000498713 ZNF219Q9P2Y4 722 aaPredicted RBP19.26■□□□□ 0.67
ANKRD28-214ENST00000498713 APLP2Q06481 763 aa19.18■□□□□ 0.66
ANKRD28-214ENST00000498713 SLC4A2P04920 1241 aa19.11■□□□□ 0.65
ANKRD28-214ENST00000498713 RBM42Q9BTD8 480 aaKnown RBP19.11■□□□□ 0.65
ANKRD28-214ENST00000498713 CHRDL2Q6WN34 429 aa19.09■□□□□ 0.65
ANKRD28-214ENST00000498713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
ANKRD28-214ENST00000498713 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
ANKRD28-214ENST00000498713 SP7Q8TDD2 431 aaPredicted RBP18.92■□□□□ 0.62
ANKRD28-214ENST00000498713 SAMD1Q6SPF0 538 aaPredicted RBP18.8■□□□□ 0.6
ANKRD28-214ENST00000498713 POLA2Q14181 598 aa18.57■□□□□ 0.56
ANKRD28-214ENST00000498713 AKT1S1Q96B36 256 aa18.48■□□□□ 0.55
ANKRD28-214ENST00000498713 KCNA4P22459 653 aa18.45■□□□□ 0.54
ANKRD28-214ENST00000498713 PIP4P2Q8N4L2 257 aa18.44■□□□□ 0.54
ANKRD28-214ENST00000498713 HAX1O00165 279 aa18.31■□□□□ 0.52
ANKRD28-214ENST00000498713 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
ANKRD28-214ENST00000498713 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
ANKRD28-214ENST00000498713 FXR2P51116 673 aaKnown RBP eCLIP18.18■□□□□ 0.5
ANKRD28-214ENST00000498713 PITPNM1O00562 1244 aa18.13■□□□□ 0.49
ANKRD28-214ENST00000498713 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
ANKRD28-214ENST00000498713 EVX2Q03828 476 aa18.06■□□□□ 0.48
ANKRD28-214ENST00000498713 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
ANKRD28-214ENST00000498713 ATF5Q9Y2D1 282 aaPredicted RBP17.92■□□□□ 0.46
ANKRD28-214ENST00000498713 LHX8Q68G74 356 aa17.71■□□□□ 0.43
ANKRD28-214ENST00000498713 C19orf67A6NJJ6 358 aa17.64■□□□□ 0.41
ANKRD28-214ENST00000498713 PRKAR2AP13861 404 aaKnown RBP17.62■□□□□ 0.41
ANKRD28-214ENST00000498713 GABBR2O75899 941 aa17.59■□□□□ 0.41
ANKRD28-214ENST00000498713 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
ANKRD28-214ENST00000498713 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
ANKRD28-214ENST00000498713 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
ANKRD28-214ENST00000498713 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
ANKRD28-214ENST00000498713 SPDYE1Q8NFV5 336 aaPredicted RBP17.42■□□□□ 0.38
ANKRD28-214ENST00000498713 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
ANKRD28-214ENST00000498713 PLSCR2Q9NRY7 297 aa17.35■□□□□ 0.37
ANKRD28-214ENST00000498713 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
ANKRD28-214ENST00000498713 FBLN2P98095 1184 aa17.24■□□□□ 0.35
ANKRD28-214ENST00000498713 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
ANKRD28-214ENST00000498713 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
ANKRD28-214ENST00000498713 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
ANKRD28-214ENST00000498713 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
ANKRD28-214ENST00000498713 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
ANKRD28-214ENST00000498713 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
ANKRD28-214ENST00000498713 CD44P16070 742 aaKnown RBP17■□□□□ 0.31
ANKRD28-214ENST00000498713 CLCN6P51797 869 aa16.99■□□□□ 0.31
ANKRD28-214ENST00000498713 ZBTB22O15209 634 aa16.98■□□□□ 0.31
ANKRD28-214ENST00000498713 PRR29P0C7W0 189 aa16.98■□□□□ 0.31
ANKRD28-214ENST00000498713 DCBLD2Q96PD2 775 aa16.87■□□□□ 0.29
ANKRD28-214ENST00000498713 FARP1Q9Y4F1 1045 aaPredicted RBP16.87■□□□□ 0.29
ANKRD28-214ENST00000498713 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
ANKRD28-214ENST00000498713 OTUD5Q96G74 571 aa16.78■□□□□ 0.28
ANKRD28-214ENST00000498713 ZNF579Q8NAF0 562 aaKnown RBP16.74■□□□□ 0.27
ANKRD28-214ENST00000498713 POTEMA6NI47 508 aa16.73■□□□□ 0.27
ANKRD28-214ENST00000498713 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
ANKRD28-214ENST00000498713 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
ANKRD28-214ENST00000498713 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
ANKRD28-214ENST00000498713 GALR2O43603 387 aaPredicted RBP16.57■□□□□ 0.24
ANKRD28-214ENST00000498713 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
ANKRD28-214ENST00000498713 CREBZFQ9NS37 354 aa16.39■□□□□ 0.21
ANKRD28-214ENST00000498713 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
ANKRD28-214ENST00000498713 PHF12Q96QT6 1004 aa16.3■□□□□ 0.2
ANKRD28-214ENST00000498713 LCE2DQ5TA82 110 aaPredicted RBP16.28■□□□□ 0.2
ANKRD28-214ENST00000498713 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
ANKRD28-214ENST00000498713 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
ANKRD28-214ENST00000498713 METRNQ9UJH8 293 aa16.22■□□□□ 0.19
ANKRD28-214ENST00000498713 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
ANKRD28-214ENST00000498713 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
ANKRD28-214ENST00000498713 SLC39A7Q92504 469 aa16.16■□□□□ 0.18
ANKRD28-214ENST00000498713 C7P10643 843 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms