RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
PTPRK-215ENST00000498284 FAM212AQ96EL1 285 aa11.92□□□□□ -0.5
PTPRK-215ENST00000498284 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
PTPRK-215ENST00000498284 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
PTPRK-215ENST00000498284 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
PTPRK-215ENST00000498284 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-215ENST00000498284 RGL2O15211 777 aa11.78□□□□□ -0.52
PTPRK-215ENST00000498284 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
PTPRK-215ENST00000498284 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-215ENST00000498284 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-215ENST00000498284 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
PTPRK-215ENST00000498284 PYGBP11216 843 aa11.73□□□□□ -0.53
PTPRK-215ENST00000498284 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
PTPRK-215ENST00000498284 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
PTPRK-215ENST00000498284 RNF25Q96BH1 459 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-215ENST00000498284 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
PTPRK-215ENST00000498284 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
PTPRK-215ENST00000498284 CLCN6P51797 869 aa11.65□□□□□ -0.54
PTPRK-215ENST00000498284 LHX8Q68G74 356 aa11.63□□□□□ -0.55
PTPRK-215ENST00000498284 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
PTPRK-215ENST00000498284 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
PTPRK-215ENST00000498284 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
PTPRK-215ENST00000498284 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-215ENST00000498284 MAP3K13O43283 966 aa11.58□□□□□ -0.56
PTPRK-215ENST00000498284 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
PTPRK-215ENST00000498284 ZNF467Q7Z7K2 595 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-215ENST00000498284 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
PTPRK-215ENST00000498284 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-215ENST00000498284 SGIP1Q9BQI5 828 aa11.56□□□□□ -0.56
PTPRK-215ENST00000498284 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
PTPRK-215ENST00000498284 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
PTPRK-215ENST00000498284 HS6ST3Q8IZP7 471 aa11.53□□□□□ -0.56
PTPRK-215ENST00000498284 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
PTPRK-215ENST00000498284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-215ENST00000498284 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-215ENST00000498284 ZFP91Q96JP5 570 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-215ENST00000498284 STK25O00506 426 aa11.5□□□□□ -0.57
PTPRK-215ENST00000498284 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
PTPRK-215ENST00000498284 PSEN1P49768 467 aa11.47□□□□□ -0.57
PTPRK-215ENST00000498284 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
PTPRK-215ENST00000498284 BCL11BQ9C0K0 894 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-215ENST00000498284 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-215ENST00000498284 STK24Q9Y6E0 443 aa11.45□□□□□ -0.58
PTPRK-215ENST00000498284 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
PTPRK-215ENST00000498284 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
PTPRK-215ENST00000498284 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
PTPRK-215ENST00000498284 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
PTPRK-215ENST00000498284 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
PTPRK-215ENST00000498284 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-215ENST00000498284 PAXIP1Q6ZW49 1069 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-215ENST00000498284 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
PTPRK-215ENST00000498284 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
PTPRK-215ENST00000498284 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
PTPRK-215ENST00000498284 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
PTPRK-215ENST00000498284 TIE1P35590 1138 aa11.32□□□□□ -0.6
PTPRK-215ENST00000498284 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-215ENST00000498284 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
PTPRK-215ENST00000498284 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-215ENST00000498284 TTLL13PA6NNM8 815 aa11.28□□□□□ -0.6
PTPRK-215ENST00000498284 ATMINO43313 823 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-215ENST00000498284 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-215ENST00000498284 OTUD5Q96G74 571 aa11.28□□□□□ -0.6
PTPRK-215ENST00000498284 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
PTPRK-215ENST00000498284 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-215ENST00000498284 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
PTPRK-215ENST00000498284 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
PTPRK-215ENST00000498284 SOX12O15370 315 aa11.23□□□□□ -0.61
PTPRK-215ENST00000498284 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
PTPRK-215ENST00000498284 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
PTPRK-215ENST00000498284 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
PTPRK-215ENST00000498284 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
PTPRK-215ENST00000498284 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-215ENST00000498284 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
PTPRK-215ENST00000498284 NLRP6P59044 892 aa11.19□□□□□ -0.62
PTPRK-215ENST00000498284 SLC39A7Q92504 469 aa11.19□□□□□ -0.62
PTPRK-215ENST00000498284 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
PTPRK-215ENST00000498284 C7P10643 843 aa11.18□□□□□ -0.62
PTPRK-215ENST00000498284 FBXO22Q8NEZ5 403 aa11.17□□□□□ -0.62
PTPRK-215ENST00000498284 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
PTPRK-215ENST00000498284 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
PTPRK-215ENST00000498284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.632e-11■■□□□ 11.8
PTPRK-215ENST00000498284 MS4A4AQ96JQ5 239 aa11.11□□□□□ -0.63
PTPRK-215ENST00000498284 PPP1R37O75864 691 aa11.09□□□□□ -0.63
PTPRK-215ENST00000498284 IER5LQ5T953 404 aa11.09□□□□□ -0.63
PTPRK-215ENST00000498284 ILDR1Q86SU0 546 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-215ENST00000498284 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
PTPRK-215ENST00000498284 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-215ENST00000498284 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
PTPRK-215ENST00000498284 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
PTPRK-215ENST00000498284 KDM2AQ9Y2K7 1162 aa11.03□□□□□ -0.64
PTPRK-215ENST00000498284 PLCG2P16885 1265 aa11.01□□□□□ -0.65
PTPRK-215ENST00000498284 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
PTPRK-215ENST00000498284 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-215ENST00000498284 MAMSTRQ6ZN01 415 aa11□□□□□ -0.65
PTPRK-215ENST00000498284 SEC24BO95487 1268 aa10.99□□□□□ -0.65
PTPRK-215ENST00000498284 CADPS2Q86UW7 1296 aa10.98□□□□□ -0.65
PTPRK-215ENST00000498284 POTEMA6NI47 508 aa10.96□□□□□ -0.65
PTPRK-215ENST00000498284 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
PTPRK-215ENST00000498284 SCUBE2Q9NQ36 999 aa10.95□□□□□ -0.66
PTPRK-215ENST00000498284 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms