RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 CUX1P39880 1505 aa16.41■□□□□ 0.22
MACF1-225ENST00000497807 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
MACF1-225ENST00000497807 WDR62O43379 1518 aa16.4■□□□□ 0.22
MACF1-225ENST00000497807 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
MACF1-225ENST00000497807 TAOK2Q9UL54 1235 aa16.38■□□□□ 0.21
MACF1-225ENST00000497807 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
MACF1-225ENST00000497807 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
MACF1-225ENST00000497807 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.21
MACF1-225ENST00000497807 SOGA1O94964 1423 aa16.33■□□□□ 0.2
MACF1-225ENST00000497807 CUX2O14529 1486 aa16.33■□□□□ 0.2
MACF1-225ENST00000497807 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
MACF1-225ENST00000497807 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
MACF1-225ENST00000497807 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
MACF1-225ENST00000497807 AAMPQ13685 434 aa16.29■□□□□ 0.2
MACF1-225ENST00000497807 TSHZ2Q9NRE2 1034 aa16.28■□□□□ 0.2
MACF1-225ENST00000497807 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
MACF1-225ENST00000497807 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
MACF1-225ENST00000497807 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
MACF1-225ENST00000497807 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
MACF1-225ENST00000497807 BRD2P25440 801 aaKnown RBP16.23■□□□□ 0.19
MACF1-225ENST00000497807 CHMP4AQ9BY43 222 aa16.23■□□□□ 0.19
MACF1-225ENST00000497807 ZNF608Q9ULD9 1512 aaPredicted RBP16.21■□□□□ 0.19
MACF1-225ENST00000497807 TPRNQ4KMQ1 711 aa16.2■□□□□ 0.18
MACF1-225ENST00000497807 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■□□ 18.3
MACF1-225ENST00000497807 GLIPR1L2Q4G1C9 344 aa16.18■□□□□ 0.18
MACF1-225ENST00000497807 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
MACF1-225ENST00000497807 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
MACF1-225ENST00000497807 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
MACF1-225ENST00000497807 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
MACF1-225ENST00000497807 A0A0U1RQG5 324 aaPredicted RBP16.13■□□□□ 0.17
MACF1-225ENST00000497807 LOC105371045A0A1W2PR82 267 aa16.12■□□□□ 0.17
MACF1-225ENST00000497807 ZMYND15Q9H091 742 aa16.12■□□□□ 0.17
MACF1-225ENST00000497807 RBM10P98175 930 aaKnown RBP16.11■□□□□ 0.17
MACF1-225ENST00000497807 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
MACF1-225ENST00000497807 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
MACF1-225ENST00000497807 DHX37Q8IY37 1157 aaKnown RBP16.1■□□□□ 0.17
MACF1-225ENST00000497807 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
MACF1-225ENST00000497807 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
MACF1-225ENST00000497807 RSPH4AQ5TD94 716 aa16.09■□□□□ 0.17
MACF1-225ENST00000497807 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
MACF1-225ENST00000497807 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
MACF1-225ENST00000497807 FBLN2P98095 1184 aa16.08■□□□□ 0.16
MACF1-225ENST00000497807 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
MACF1-225ENST00000497807 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
MACF1-225ENST00000497807 GRIN2BQ13224 1484 aa16.04■□□□□ 0.16
MACF1-225ENST00000497807 IGF1RP08069 1367 aa16.04■□□□□ 0.16
MACF1-225ENST00000497807 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
MACF1-225ENST00000497807 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
MACF1-225ENST00000497807 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.15
MACF1-225ENST00000497807 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
MACF1-225ENST00000497807 ABCA5Q8WWZ7 1642 aa15.99■□□□□ 0.15
MACF1-225ENST00000497807 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
MACF1-225ENST00000497807 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
MACF1-225ENST00000497807 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.14
MACF1-225ENST00000497807 BCANQ96GW7 911 aa15.95■□□□□ 0.14
MACF1-225ENST00000497807 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
MACF1-225ENST00000497807 EEA1Q15075 1411 aa15.93■□□□□ 0.14
MACF1-225ENST00000497807 CDK11AQ9UQ88 783 aaPredicted RBP15.92■□□□□ 0.14
MACF1-225ENST00000497807 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
MACF1-225ENST00000497807 FHAD1B1AJZ9 1412 aa15.91■□□□□ 0.14
MACF1-225ENST00000497807 PBRM1Q86U86 1689 aa15.9■□□□□ 0.14
MACF1-225ENST00000497807 PAXIP1Q6ZW49 1069 aaPredicted RBP15.9■□□□□ 0.14
MACF1-225ENST00000497807 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
MACF1-225ENST00000497807 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
MACF1-225ENST00000497807 SYNJ2O15056 1496 aa15.89■□□□□ 0.13
MACF1-225ENST00000497807 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
MACF1-225ENST00000497807 NAP1L5Q96NT1 182 aaPredicted RBP15.86■□□□□ 0.13
MACF1-225ENST00000497807 RAPGEF2Q9Y4G8 1499 aa15.84■□□□□ 0.13
MACF1-225ENST00000497807 ADAMTS12P58397 1594 aa15.84■□□□□ 0.13
MACF1-225ENST00000497807 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.13
MACF1-225ENST00000497807 PRXQ9BXM0 1461 aa15.83■□□□□ 0.12
MACF1-225ENST00000497807 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
MACF1-225ENST00000497807 BCCIPQ9P287 314 aaKnown RBP eCLIP15.81■□□□□ 0.12
MACF1-225ENST00000497807 SUPT16HQ9Y5B9 1047 aaKnown RBP15.81■□□□□ 0.12
MACF1-225ENST00000497807 CUL7Q14999 1698 aa15.8■□□□□ 0.12
MACF1-225ENST00000497807 CDK11BP21127 795 aaKnown RBP15.8■□□□□ 0.12
MACF1-225ENST00000497807 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
MACF1-225ENST00000497807 HSP90B1P14625 803 aaKnown RBP15.79■□□□□ 0.12
MACF1-225ENST00000497807 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.12
MACF1-225ENST00000497807 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.11
MACF1-225ENST00000497807 CHD1O14646 1710 aa15.77■□□□□ 0.11
MACF1-225ENST00000497807 DIEXFQ68CQ4 756 aaKnown RBP15.75■□□□□ 0.11
MACF1-225ENST00000497807 NUP160Q12769 1436 aa15.72■□□□□ 0.11
MACF1-225ENST00000497807 MSH5O43196 834 aa15.72■□□□□ 0.11
MACF1-225ENST00000497807 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
MACF1-225ENST00000497807 GOLGA3Q08378 1498 aa15.71■□□□□ 0.1
MACF1-225ENST00000497807 IL27Q8NEV9 243 aa15.71■□□□□ 0.1
MACF1-225ENST00000497807 RBM19Q9Y4C8 960 aaKnown RBP15.7■□□□□ 0.1
MACF1-225ENST00000497807 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
MACF1-225ENST00000497807 NAP1L2Q9ULW6 460 aaPredicted RBP15.69■□□□□ 0.1
MACF1-225ENST00000497807 KIF21BO75037 1637 aa15.68■□□□□ 0.1
MACF1-225ENST00000497807 KIAA0586Q9BVV6 1533 aa15.67■□□□□ 0.1
MACF1-225ENST00000497807 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
MACF1-225ENST00000497807 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
MACF1-225ENST00000497807 ZBTB22O15209 634 aa15.62■□□□□ 0.09
MACF1-225ENST00000497807 CLASP1Q7Z460 1538 aa15.61■□□□□ 0.09
MACF1-225ENST00000497807 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
MACF1-225ENST00000497807 TNIKQ9UKE5 1360 aa15.6■□□□□ 0.09
MACF1-225ENST00000497807 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
MACF1-225ENST00000497807 IPO4Q8TEX9 1081 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms