RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
CMSS1-209ENST00000497345 CCDC61Q9Y6R9 512 aa9.87□□□□□ -0.83
CMSS1-209ENST00000497345 NUBP1P53384 320 aa9.83□□□□□ -0.84
CMSS1-209ENST00000497345 LHX8Q68G74 356 aa9.83□□□□□ -0.84
CMSS1-209ENST00000497345 MS4A3Q96HJ5 214 aa9.82□□□□□ -0.84
CMSS1-209ENST00000497345 KIF12Q96FN5 646 aa9.81□□□□□ -0.84
CMSS1-209ENST00000497345 VASPP50552 380 aaPredicted RBP9.77□□□□□ -0.85
CMSS1-209ENST00000497345 MAP3K13O43283 966 aa9.76□□□□□ -0.85
CMSS1-209ENST00000497345 PELP1Q8IZL8 1130 aaKnown RBP9.74□□□□□ -0.85
CMSS1-209ENST00000497345 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
CMSS1-209ENST00000497345 ATMINO43313 823 aaPredicted RBP9.73□□□□□ -0.85
CMSS1-209ENST00000497345 ASTLQ6HA08 431 aaPredicted RBP9.73□□□□□ -0.85
CMSS1-209ENST00000497345 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
CMSS1-209ENST00000497345 DCAF8Q5TAQ9 597 aa9.71□□□□□ -0.86
CMSS1-209ENST00000497345 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
CMSS1-209ENST00000497345 TRPC6Q9Y210 931 aa9.68□□□□□ -0.86
CMSS1-209ENST00000497345 PCDHB13Q9Y5F0 798 aa9.68□□□□□ -0.86
CMSS1-209ENST00000497345 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-209ENST00000497345 TIE1P35590 1138 aa9.66□□□□□ -0.86
CMSS1-209ENST00000497345 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
CMSS1-209ENST00000497345 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
CMSS1-209ENST00000497345 C7P10643 843 aa9.64□□□□□ -0.87
CMSS1-209ENST00000497345 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
CMSS1-209ENST00000497345 IFNL1Q8IU54 200 aa9.63□□□□□ -0.87
CMSS1-209ENST00000497345 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
CMSS1-209ENST00000497345 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
CMSS1-209ENST00000497345 PYGBP11216 843 aa9.61□□□□□ -0.87
CMSS1-209ENST00000497345 GSE1Q14687 1217 aa9.61□□□□□ -0.87
CMSS1-209ENST00000497345 TTLL13PA6NNM8 815 aa9.6□□□□□ -0.87
CMSS1-209ENST00000497345 SPOCK2Q92563 424 aa9.58□□□□□ -0.88
CMSS1-209ENST00000497345 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
CMSS1-209ENST00000497345 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
CMSS1-209ENST00000497345 PCDHB8Q9UN66 801 aa9.54□□□□□ -0.88
CMSS1-209ENST00000497345 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
CMSS1-209ENST00000497345 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
CMSS1-209ENST00000497345 CHRM1P11229 460 aaPredicted RBP9.53□□□□□ -0.88
CMSS1-209ENST00000497345 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
CMSS1-209ENST00000497345 SEC24BO95487 1268 aa9.5□□□□□ -0.89
CMSS1-209ENST00000497345 IER5LQ5T953 404 aa9.5□□□□□ -0.89
CMSS1-209ENST00000497345 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-209ENST00000497345 COLQQ9Y215 455 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-209ENST00000497345 MAMSTRQ6ZN01 415 aa9.48□□□□□ -0.89
CMSS1-209ENST00000497345 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
CMSS1-209ENST00000497345 SCUBE2Q9NQ36 999 aa9.42□□□□□ -0.9
CMSS1-209ENST00000497345 PLCG2P16885 1265 aa9.4□□□□□ -0.9
CMSS1-209ENST00000497345 PSEN1P49768 467 aa9.4□□□□□ -0.9
CMSS1-209ENST00000497345 IRX5P78411 483 aaPredicted RBP9.4□□□□□ -0.9
CMSS1-209ENST00000497345 TRIM41Q8WV44 630 aa9.37□□□□□ -0.91
CMSS1-209ENST00000497345 OCEL1Q9H607 264 aa9.37□□□□□ -0.91
CMSS1-209ENST00000497345 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
CMSS1-209ENST00000497345 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
CMSS1-209ENST00000497345 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
CMSS1-209ENST00000497345 PDCD7Q8N8D1 485 aaKnown RBP9.28□□□□□ -0.92
CMSS1-209ENST00000497345 CABP2Q9NPB3 220 aa9.28□□□□□ -0.92
CMSS1-209ENST00000497345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.28□□□□□ -0.92
CMSS1-209ENST00000497345 FAM163AQ96GL9 167 aaPredicted RBP9.27□□□□□ -0.93
CMSS1-209ENST00000497345 CCDC180Q9P1Z9 1646 aa9.27□□□□□ -0.93
CMSS1-209ENST00000497345 SLAIN1Q8ND83 568 aa9.26□□□□□ -0.93
CMSS1-209ENST00000497345 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
CMSS1-209ENST00000497345 ILDR1Q86SU0 546 aaPredicted RBP9.24□□□□□ -0.93
CMSS1-209ENST00000497345 RNF25Q96BH1 459 aaPredicted RBP9.24□□□□□ -0.93
CMSS1-209ENST00000497345 POTEMA6NI47 508 aa9.23□□□□□ -0.93
CMSS1-209ENST00000497345 L3MBTL3Q96JM7 780 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-209ENST00000497345 POTEGQ6S5H5 508 aa9.22□□□□□ -0.93
CMSS1-209ENST00000497345 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
CMSS1-209ENST00000497345 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
CMSS1-209ENST00000497345 VGFO15240 615 aaPredicted RBP9.19□□□□□ -0.94
CMSS1-209ENST00000497345 DPY19L2Q6NUT2 758 aa9.19□□□□□ -0.94
CMSS1-209ENST00000497345 EFCAB3Q8N7B9 438 aa9.19□□□□□ -0.94
CMSS1-209ENST00000497345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
CMSS1-209ENST00000497345 ZFP91Q96JP5 570 aaPredicted RBP9.18□□□□□ -0.94
CMSS1-209ENST00000497345 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
CMSS1-209ENST00000497345 ECM2O94769 699 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-209ENST00000497345 PKD2Q13563 968 aa9.14□□□□□ -0.95
CMSS1-209ENST00000497345 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
CMSS1-209ENST00000497345 SOX12O15370 315 aa9.13□□□□□ -0.95
CMSS1-209ENST00000497345 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
CMSS1-209ENST00000497345 G3V3G9 751 aa9.12□□□□□ -0.95
CMSS1-209ENST00000497345 ST18O60284 1047 aa9.12□□□□□ -0.95
CMSS1-209ENST00000497345 SNPHO15079 494 aa9.11□□□□□ -0.95
CMSS1-209ENST00000497345 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
CMSS1-209ENST00000497345 DCAF8L2P0C7V8 631 aa9.08□□□□□ -0.96
CMSS1-209ENST00000497345 TMEM121BQ9BXQ6 578 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-209ENST00000497345 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-209ENST00000497345 RGL2O15211 777 aa9.07□□□□□ -0.96
CMSS1-209ENST00000497345 PHF8Q9UPP1 1060 aa9.07□□□□□ -0.96
CMSS1-209ENST00000497345 STK24Q9Y6E0 443 aa9.07□□□□□ -0.96
CMSS1-209ENST00000497345 MS4A4AQ96JQ5 239 aa9.05□□□□□ -0.96
CMSS1-209ENST00000497345 PLSCR2Q9NRY7 297 aa9.05□□□□□ -0.96
CMSS1-209ENST00000497345 STK25O00506 426 aa9.04□□□□□ -0.96
CMSS1-209ENST00000497345 NLRP6P59044 892 aa9.02□□□□□ -0.97
CMSS1-209ENST00000497345 MICALL2Q8IY33 904 aa9.02□□□□□ -0.97
CMSS1-209ENST00000497345 FBXO22Q8NEZ5 403 aa9□□□□□ -0.97
CMSS1-209ENST00000497345 ABCC9O60706 1549 aa9□□□□□ -0.97
CMSS1-209ENST00000497345 CDAN1Q8IWY9 1227 aa8.99□□□□□ -0.97
CMSS1-209ENST00000497345 MFRPQ9BY79 579 aa8.99□□□□□ -0.97
CMSS1-209ENST00000497345 MARVELD3Q96A59 401 aa8.97□□□□□ -0.97
CMSS1-209ENST00000497345 TMEM92Q6UXU6 159 aa8.96□□□□□ -0.98
CMSS1-209ENST00000497345 HOXB3P14651 431 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-209ENST00000497345 ZCCHC6Q5VYS8 1495 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms