RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 LHX8Q68G74 356 aa13.35□□□□□ -0.27
SOX2-OT-216ENST00000497122 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
SOX2-OT-216ENST00000497122 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
SOX2-OT-216ENST00000497122 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
SOX2-OT-216ENST00000497122 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
SOX2-OT-216ENST00000497122 NUBP1P53384 320 aa13.24□□□□□ -0.29
SOX2-OT-216ENST00000497122 KLHL34Q8N239 644 aa13.24□□□□□ -0.29
SOX2-OT-216ENST00000497122 MAP3K13O43283 966 aa13.23□□□□□ -0.29
SOX2-OT-216ENST00000497122 VASPP50552 380 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-216ENST00000497122 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
SOX2-OT-216ENST00000497122 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-216ENST00000497122 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-216ENST00000497122 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-216ENST00000497122 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
SOX2-OT-216ENST00000497122 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
SOX2-OT-216ENST00000497122 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
SOX2-OT-216ENST00000497122 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-216ENST00000497122 SLC39A7Q92504 469 aa13.1□□□□□ -0.31
SOX2-OT-216ENST00000497122 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-216ENST00000497122 PYGBP11216 843 aa13.08□□□□□ -0.32
SOX2-OT-216ENST00000497122 C7P10643 843 aa13.06□□□□□ -0.32
SOX2-OT-216ENST00000497122 TIE1P35590 1138 aa13.05□□□□□ -0.32
SOX2-OT-216ENST00000497122 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
SOX2-OT-216ENST00000497122 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
SOX2-OT-216ENST00000497122 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
SOX2-OT-216ENST00000497122 POTEB2H3BUK9 544 aa13.02□□□□□ -0.33
SOX2-OT-216ENST00000497122 GSE1Q14687 1217 aa13□□□□□ -0.33
SOX2-OT-216ENST00000497122 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
SOX2-OT-216ENST00000497122 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-216ENST00000497122 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
SOX2-OT-216ENST00000497122 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
SOX2-OT-216ENST00000497122 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
SOX2-OT-216ENST00000497122 SEC24BO95487 1268 aa12.95□□□□□ -0.34
SOX2-OT-216ENST00000497122 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
SOX2-OT-216ENST00000497122 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-216ENST00000497122 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
SOX2-OT-216ENST00000497122 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
SOX2-OT-216ENST00000497122 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-216ENST00000497122 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
SOX2-OT-216ENST00000497122 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
SOX2-OT-216ENST00000497122 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-216ENST00000497122 IER5LQ5T953 404 aa12.84□□□□□ -0.35
SOX2-OT-216ENST00000497122 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
SOX2-OT-216ENST00000497122 PLCG2P16885 1265 aa12.81□□□□□ -0.36
SOX2-OT-216ENST00000497122 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-216ENST00000497122 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
SOX2-OT-216ENST00000497122 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-216ENST00000497122 PSEN1P49768 467 aa12.74□□□□□ -0.37
SOX2-OT-216ENST00000497122 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
SOX2-OT-216ENST00000497122 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
SOX2-OT-216ENST00000497122 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
SOX2-OT-216ENST00000497122 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-216ENST00000497122 OCEL1Q9H607 264 aa12.69□□□□□ -0.38
SOX2-OT-216ENST00000497122 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
SOX2-OT-216ENST00000497122 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
SOX2-OT-216ENST00000497122 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
SOX2-OT-216ENST00000497122 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
SOX2-OT-216ENST00000497122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.39
SOX2-OT-216ENST00000497122 POTEMA6NI47 508 aa12.58□□□□□ -0.4
SOX2-OT-216ENST00000497122 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
SOX2-OT-216ENST00000497122 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-216ENST00000497122 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-216ENST00000497122 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-216ENST00000497122 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
SOX2-OT-216ENST00000497122 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-216ENST00000497122 G3V3G9 751 aa12.48□□□□□ -0.41
SOX2-OT-216ENST00000497122 RNF25Q96BH1 459 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-216ENST00000497122 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
SOX2-OT-216ENST00000497122 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
SOX2-OT-216ENST00000497122 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
SOX2-OT-216ENST00000497122 LCE2DQ5TA82 110 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-216ENST00000497122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-216ENST00000497122 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-216ENST00000497122 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-216ENST00000497122 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-216ENST00000497122 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
SOX2-OT-216ENST00000497122 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
SOX2-OT-216ENST00000497122 SNPHO15079 494 aa12.37□□□□□ -0.43
SOX2-OT-216ENST00000497122 ST18O60284 1047 aa12.37□□□□□ -0.43
SOX2-OT-216ENST00000497122 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
SOX2-OT-216ENST00000497122 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
SOX2-OT-216ENST00000497122 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
SOX2-OT-216ENST00000497122 STK25O00506 426 aa12.3□□□□□ -0.44
SOX2-OT-216ENST00000497122 SOX12O15370 315 aa12.3□□□□□ -0.44
SOX2-OT-216ENST00000497122 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
SOX2-OT-216ENST00000497122 PKD2Q13563 968 aa12.29□□□□□ -0.44
SOX2-OT-216ENST00000497122 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
SOX2-OT-216ENST00000497122 RGL2O15211 777 aa12.28□□□□□ -0.44
SOX2-OT-216ENST00000497122 MARVELD3Q96A59 401 aa12.26□□□□□ -0.45
SOX2-OT-216ENST00000497122 TMEM121BQ9BXQ6 578 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-216ENST00000497122 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
SOX2-OT-216ENST00000497122 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
SOX2-OT-216ENST00000497122 NLRP6P59044 892 aa12.22□□□□□ -0.45
SOX2-OT-216ENST00000497122 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
SOX2-OT-216ENST00000497122 EMP3P54852 163 aa12.19□□□□□ -0.46
SOX2-OT-216ENST00000497122 ZNF710Q8N1W2 664 aa12.17□□□□□ -0.46
SOX2-OT-216ENST00000497122 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
SOX2-OT-216ENST00000497122 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
SOX2-OT-216ENST00000497122 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
SOX2-OT-216ENST00000497122 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms