RNA–Protein interactions for RNA: ENST00000496305.5

PHF20-215, Transcript of PHD finger protein 20, human

TSL 4

Gene PHF20, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHF20-215	ENST00000496305	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	14.39	□□□□□ -0.11
PHF20-215	ENST00000496305	BBX	Q8WY36	941 aa	Predicted RBP	14.38	□□□□□ -0.11
PHF20-215	ENST00000496305	HAX1	O00165	279 aa		14.34	□□□□□ -0.11
PHF20-215	ENST00000496305	SP7	Q8TDD2	431 aa	Predicted RBP	14.31	□□□□□ -0.12
PHF20-215	ENST00000496305	TAOK2	Q9UL54	1235 aa		14.31	□□□□□ -0.12
PHF20-215	ENST00000496305	CHGA	P10645	457 aa	Known RBP	14.3	□□□□□ -0.12
PHF20-215	ENST00000496305	HAP1	P54257	671 aa	Predicted RBP	14.3	□□□□□ -0.12
PHF20-215	ENST00000496305	CHADL	Q6NUI6	762 aa		14.3	□□□□□ -0.12
PHF20-215	ENST00000496305	RASEF	Q8IZ41	740 aa		14.29	□□□□□ -0.12
PHF20-215	ENST00000496305	FARP1	Q9Y4F1	1045 aa	Predicted RBP	14.24	□□□□□ -0.13
PHF20-215	ENST00000496305	RIOK3	O14730	519 aa	Known RBP	14.22	□□□□□ -0.13
PHF20-215	ENST00000496305	CHRM1	P11229	460 aa	Predicted RBP	14.22	□□□□□ -0.13
PHF20-215	ENST00000496305	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14.22	□□□□□ -0.13
PHF20-215	ENST00000496305	CFAP44	Q96MT7	982 aa		14.21	□□□□□ -0.13
PHF20-215	ENST00000496305	C19orf67	A6NJJ6	358 aa		14.2	□□□□□ -0.14
PHF20-215	ENST00000496305	RNF25	Q96BH1	459 aa	Predicted RBP	14.19	□□□□□ -0.14
PHF20-215	ENST00000496305	SPRYD3	Q8NCJ5	442 aa		14.18	□□□□□ -0.14
PHF20-215	ENST00000496305	PYGB	P11216	843 aa		14.16	□□□□□ -0.14
PHF20-215	ENST00000496305	HS6ST3	Q8IZP7	471 aa		14.16	□□□□□ -0.14
PHF20-215	ENST00000496305	TSPYL2	Q9H2G4	693 aa	Predicted RBP	14.16	□□□□□ -0.14
PHF20-215	ENST00000496305	VGF	O15240	615 aa	Predicted RBP	14.14	□□□□□ -0.15
PHF20-215	ENST00000496305	EVX2	Q03828	476 aa		14.14	□□□□□ -0.15
PHF20-215	ENST00000496305	PAK3	O75914	559 aa	Predicted RBP	14.09	□□□□□ -0.15
PHF20-215	ENST00000496305	STK25	O00506	426 aa		14.08	□□□□□ -0.16
PHF20-215	ENST00000496305	VSIG10	Q8N0Z9	540 aa		14.08	□□□□□ -0.16
PHF20-215	ENST00000496305	SGIP1	Q9BQI5	828 aa		14.04	□□□□□ -0.16
PHF20-215	ENST00000496305	DNAJC5	Q9H3Z4	198 aa		14.03	□□□□□ -0.16
PHF20-215	ENST00000496305	ZNF467	Q7Z7K2	595 aa	Predicted RBP	14.02	□□□□□ -0.17
PHF20-215	ENST00000496305	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	14	□□□□□ -0.17
PHF20-215	ENST00000496305	ZFP91	Q96JP5	570 aa	Predicted RBP	14	□□□□□ -0.17
PHF20-215	ENST00000496305	STK24	Q9Y6E0	443 aa		14	□□□□□ -0.17
PHF20-215	ENST00000496305	CD44	P16070	742 aa	Known RBP	13.99	□□□□□ -0.17
PHF20-215	ENST00000496305	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.97	□□□□□ -0.17
PHF20-215	ENST00000496305	CCDC61	Q9Y6R9	512 aa		13.97	□□□□□ -0.17
PHF20-215	ENST00000496305	TSHZ2	Q9NRE2	1034 aa		13.92	□□□□□ -0.18
PHF20-215	ENST00000496305	CLCN6	P51797	869 aa		13.91	□□□□□ -0.18
PHF20-215	ENST00000496305	PDAP1	Q13442	181 aa	Known RBP	13.91	□□□□□ -0.18
PHF20-215	ENST00000496305	RYDEN	Q9NUL5	291 aa	Known RBP	13.91	□□□□□ -0.18
PHF20-215	ENST00000496305	GABBR2	O75899	941 aa		13.9	□□□□□ -0.18
PHF20-215	ENST00000496305	ZNF579	Q8NAF0	562 aa	Known RBP	13.9	□□□□□ -0.18
PHF20-215	ENST00000496305	NKX1-1	Q15270	411 aa	Predicted RBP	13.89	□□□□□ -0.19
PHF20-215	ENST00000496305	PCDHB8	Q9UN66	801 aa		13.89	□□□□□ -0.19
PHF20-215	ENST00000496305	PCDHB13	Q9Y5F0	798 aa		13.89	□□□□□ -0.19
PHF20-215	ENST00000496305	ZRANB1	Q9UGI0	708 aa		13.87	□□□□□ -0.19
PHF20-215	ENST00000496305	GTPBP6	O43824	516 aa	Predicted RBP	13.85	□□□□□ -0.19
PHF20-215	ENST00000496305	KDM2A	Q9Y2K7	1162 aa		13.84	□□□□□ -0.19
PHF20-215	ENST00000496305	PSEN1	P49768	467 aa		13.83	□□□□□ -0.2
PHF20-215	ENST00000496305	MAP3K13	O43283	966 aa		13.82	□□□□□ -0.2
PHF20-215	ENST00000496305	KIF12	Q96FN5	646 aa		13.82	□□□□□ -0.2
PHF20-215	ENST00000496305	IFNL1	Q8IU54	200 aa		13.79	□□□□□ -0.2
PHF20-215	ENST00000496305	BCAN	Q96GW7	911 aa		13.79	□□□□□ -0.2
PHF20-215	ENST00000496305	PHF12	Q96QT6	1004 aa		13.71	□□□□□ -0.21
PHF20-215	ENST00000496305	CABP2	Q9NPB3	220 aa		13.66	□□□□□ -0.22
PHF20-215	ENST00000496305	SOX12	O15370	315 aa		13.63	□□□□□ -0.23
PHF20-215	ENST00000496305	GOLGA2	Q08379	1002 aa		13.62	□□□□□ -0.23
PHF20-215	ENST00000496305	EFCAB3	Q8N7B9	438 aa		13.62	□□□□□ -0.23
PHF20-215	ENST00000496305	NLRP6	P59044	892 aa		13.61	□□□□□ -0.23
PHF20-215	ENST00000496305	MFRP	Q9BY79	579 aa		13.6	□□□□□ -0.23
PHF20-215	ENST00000496305	GALR2	O43603	387 aa	Predicted RBP	13.58	□□□□□ -0.24
PHF20-215	ENST00000496305	POTEI	P0CG38	1075 aa		13.58	□□□□□ -0.24
PHF20-215	ENST00000496305	DCBLD2	Q96PD2	775 aa		13.58	□□□□□ -0.24
PHF20-215	ENST00000496305	MS4A3	Q96HJ5	214 aa		13.57	□□□□□ -0.24
PHF20-215	ENST00000496305	TMEM106C	Q9BVX2	250 aa		13.57	□□□□□ -0.24
PHF20-215	ENST00000496305	NBR1	Q14596	966 aa		13.53	□□□□□ -0.24
PHF20-215	ENST00000496305	PHF8	Q9UPP1	1060 aa		13.53	□□□□□ -0.24
PHF20-215	ENST00000496305	WDR70	Q9NW82	654 aa		13.52	□□□□□ -0.25
PHF20-215	ENST00000496305	MKRN3	Q13064	507 aa	Known RBP	13.51	□□□□□ -0.25
PHF20-215	ENST00000496305	FBXO22	Q8NEZ5	403 aa		13.49	□□□□□ -0.25
PHF20-215	ENST00000496305	TIE1	P35590	1138 aa		13.48	□□□□□ -0.25
PHF20-215	ENST00000496305	TRPC6	Q9Y210	931 aa		13.46	□□□□□ -0.25
PHF20-215	ENST00000496305	PPP1R37	O75864	691 aa		13.44	□□□□□ -0.26
PHF20-215	ENST00000496305	CADPS2	Q86UW7	1296 aa		13.42	□□□□□ -0.26
PHF20-215	ENST00000496305	TTLL13P	A6NNM8	815 aa		13.41	□□□□□ -0.26
PHF20-215	ENST00000496305	LHX8	Q68G74	356 aa		13.41	□□□□□ -0.26
PHF20-215	ENST00000496305	P3H3	Q8IVL6	736 aa		13.41	□□□□□ -0.26
PHF20-215	ENST00000496305	ASTL	Q6HA08	431 aa	Predicted RBP	13.38	□□□□□ -0.27
PHF20-215	ENST00000496305	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.38	□□□□□ -0.27
PHF20-215	ENST00000496305	MS4A4A	Q96JQ5	239 aa		13.35	□□□□□ -0.27
PHF20-215	ENST00000496305	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.35	□□□□□ -0.27	1e-6	■■■■□ 26.3
PHF20-215	ENST00000496305	TRIM35	Q9UPQ4	493 aa		13.35	□□□□□ -0.27
PHF20-215	ENST00000496305	ATMIN	O43313	823 aa	Predicted RBP	13.33	□□□□□ -0.28
PHF20-215	ENST00000496305	PDE4A	P27815	886 aa		13.31	□□□□□ -0.28
PHF20-215	ENST00000496305	TPRN	Q4KMQ1	711 aa		13.29	□□□□□ -0.28
PHF20-215	ENST00000496305	PELP1	Q8IZL8	1130 aa	Known RBP	13.28	□□□□□ -0.28
PHF20-215	ENST00000496305	PRKCSH	P14314	528 aa	Predicted RBP	13.27	□□□□□ -0.29
PHF20-215	ENST00000496305	SLC39A7	Q92504	469 aa		13.26	□□□□□ -0.29
PHF20-215	ENST00000496305	C7	P10643	843 aa		13.24	□□□□□ -0.29
PHF20-215	ENST00000496305	ATN1	P54259	1190 aa	Predicted RBP	13.24	□□□□□ -0.29
PHF20-215	ENST00000496305	E2F4	Q16254	413 aa		13.24	□□□□□ -0.29
PHF20-215	ENST00000496305	KCNV2	Q8TDN2	545 aa		13.24	□□□□□ -0.29
PHF20-215	ENST00000496305	LARP6	Q9BRS8	491 aa	Known RBP	13.24	□□□□□ -0.29
PHF20-215	ENST00000496305	ILDR1	Q86SU0	546 aa	Predicted RBP	13.23	□□□□□ -0.29
PHF20-215	ENST00000496305	METRN	Q9UJH8	293 aa		13.21	□□□□□ -0.29
PHF20-215	ENST00000496305	IER5L	Q5T953	404 aa		13.2	□□□□□ -0.3
PHF20-215	ENST00000496305	NCKAP5L	Q9HCH0	1330 aa		13.19	□□□□□ -0.3
PHF20-215	ENST00000496305		G3V3G9	751 aa		13.19	□□□□□ -0.3
PHF20-215	ENST00000496305	ARHGEF1	Q92888	912 aa	Known RBP	13.18	□□□□□ -0.3
PHF20-215	ENST00000496305	DDX27	Q96GQ7	796 aa	Known RBP	13.18	□□□□□ -0.3
PHF20-215	ENST00000496305	OCEL1	Q9H607	264 aa		13.18	□□□□□ -0.3
PHF20-215	ENST00000496305	CRISPLD2	Q9H0B8	497 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms