RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 ZNF219Q9P2Y4 722 aaPredicted RBP11.82□□□□□ -0.52
RPN1-206ENST00000495462 CUX1P39880 1505 aa11.8□□□□□ -0.52
RPN1-206ENST00000495462 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
RPN1-206ENST00000495462 CHD1O14646 1710 aa11.79□□□□□ -0.52
RPN1-206ENST00000495462 FGD5Q6ZNL6 1462 aa11.78□□□□□ -0.52
RPN1-206ENST00000495462 ARHGEF11O15085 1522 aa11.78□□□□□ -0.52
RPN1-206ENST00000495462 DSG3P32926 999 aa11.78□□□□□ -0.52
RPN1-206ENST00000495462 SOGA1O94964 1423 aa11.77□□□□□ -0.52
RPN1-206ENST00000495462 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
RPN1-206ENST00000495462 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
RPN1-206ENST00000495462 FBLN2P98095 1184 aa11.74□□□□□ -0.53
RPN1-206ENST00000495462 SNAPC4Q5SXM2 1469 aa11.72□□□□□ -0.53
RPN1-206ENST00000495462 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.53
RPN1-206ENST00000495462 CYB5RLQ6IPT4 315 aa11.7□□□□□ -0.54
RPN1-206ENST00000495462 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
RPN1-206ENST00000495462 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
RPN1-206ENST00000495462 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
RPN1-206ENST00000495462 ATXN8OSP0DMR3 200 aa11.68□□□□□ -0.54
RPN1-206ENST00000495462 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
RPN1-206ENST00000495462 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.54
RPN1-206ENST00000495462 GRIN2BQ13224 1484 aa11.65□□□□□ -0.54
RPN1-206ENST00000495462 CHMP7Q8WUX9 453 aaPredicted RBP11.64□□□□□ -0.55
RPN1-206ENST00000495462 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
RPN1-206ENST00000495462 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
RPN1-206ENST00000495462 ABCB7O75027 752 aa11.63□□□□□ -0.55
RPN1-206ENST00000495462 ABCA5Q8WWZ7 1642 aa11.63□□□□□ -0.55
RPN1-206ENST00000495462 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
RPN1-206ENST00000495462 ABCA10Q8WWZ4 1543 aa11.62□□□□□ -0.55
RPN1-206ENST00000495462 SYNJ2O15056 1496 aa11.62□□□□□ -0.55
RPN1-206ENST00000495462 SYNJ1O43426 1573 aa11.61□□□□□ -0.55
RPN1-206ENST00000495462 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
RPN1-206ENST00000495462 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
RPN1-206ENST00000495462 WRNQ14191 1432 aaPredicted RBP eCLIP11.56□□□□□ -0.56
RPN1-206ENST00000495462 POLA2Q14181 598 aa11.55□□□□□ -0.56
RPN1-206ENST00000495462 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
RPN1-206ENST00000495462 ADAMTS12P58397 1594 aa11.53□□□□□ -0.56
RPN1-206ENST00000495462 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
RPN1-206ENST00000495462 CEP170Q5SW79 1584 aa11.52□□□□□ -0.57
RPN1-206ENST00000495462 NUP160Q12769 1436 aa11.49□□□□□ -0.57
RPN1-206ENST00000495462 FHAD1B1AJZ9 1412 aa11.47□□□□□ -0.57
RPN1-206ENST00000495462 ERICH3Q5RHP9 1530 aa11.46□□□□□ -0.57
RPN1-206ENST00000495462 SHROOM2Q13796 1616 aa11.43□□□□□ -0.58
RPN1-206ENST00000495462 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
RPN1-206ENST00000495462 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
RPN1-206ENST00000495462 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
RPN1-206ENST00000495462 JPH4Q96JJ6 628 aa11.37□□□□□ -0.59
RPN1-206ENST00000495462 IGF1RP08069 1367 aa11.37□□□□□ -0.59
RPN1-206ENST00000495462 KIF27Q86VH2 1401 aa11.31□□□□□ -0.6
RPN1-206ENST00000495462 KIF13AQ9H1H9 1805 aa11.28□□□□□ -0.6
RPN1-206ENST00000495462 CUL7Q14999 1698 aa11.28□□□□□ -0.6
RPN1-206ENST00000495462 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
RPN1-206ENST00000495462 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.61
RPN1-206ENST00000495462 CARMIL1Q5VZK9 1371 aa11.27□□□□□ -0.61
RPN1-206ENST00000495462 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
RPN1-206ENST00000495462 TTBK1Q5TCY1 1321 aaPredicted RBP11.22□□□□□ -0.61
RPN1-206ENST00000495462 ABCC10Q5T3U5 1492 aa11.21□□□□□ -0.61
RPN1-206ENST00000495462 FAM69CQ0P6D2 419 aa11.21□□□□□ -0.61
RPN1-206ENST00000495462 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
RPN1-206ENST00000495462 MAPKBP1O60336 1514 aa11.2□□□□□ -0.62
RPN1-206ENST00000495462 PTPRGP23470 1445 aa11.18□□□□□ -0.62
RPN1-206ENST00000495462 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPN1-206ENST00000495462 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
RPN1-206ENST00000495462 IQGAP2Q13576 1575 aa11.18□□□□□ -0.62
RPN1-206ENST00000495462 DISP1Q96F81 1524 aa11.17□□□□□ -0.62
RPN1-206ENST00000495462 TNIKQ9UKE5 1360 aa11.16□□□□□ -0.62
RPN1-206ENST00000495462 RAPGEF2Q9Y4G8 1499 aa11.15□□□□□ -0.62
RPN1-206ENST00000495462 CARMIL2Q6F5E8 1435 aa11.13□□□□□ -0.63
RPN1-206ENST00000495462 TSPOAP1O95153 1857 aa11.12□□□□□ -0.63
RPN1-206ENST00000495462 ABCC2Q92887 1545 aa11.12□□□□□ -0.63
RPN1-206ENST00000495462 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
RPN1-206ENST00000495462 ASXL2Q76L83 1435 aa11.1□□□□□ -0.63
RPN1-206ENST00000495462 UACAQ9BZF9 1416 aa11.1□□□□□ -0.63
RPN1-206ENST00000495462 KIAA0556O60303 1618 aa11.1□□□□□ -0.63
RPN1-206ENST00000495462 UHRF1BP1LA0JNW5 1464 aa11.09□□□□□ -0.63
RPN1-206ENST00000495462 PPRC1Q5VV67 1664 aaKnown RBP11.08□□□□□ -0.64
RPN1-206ENST00000495462 KDM6BO15054 1643 aa11.08□□□□□ -0.64
RPN1-206ENST00000495462 PRXQ9BXM0 1461 aa11.06□□□□□ -0.64
RPN1-206ENST00000495462 KDM5BQ9UGL1 1544 aa11.06□□□□□ -0.64
RPN1-206ENST00000495462 CTTNBP2Q8WZ74 1663 aa11.06□□□□□ -0.64
RPN1-206ENST00000495462 POTEHQ6S545 545 aa11.06□□□□□ -0.64
RPN1-206ENST00000495462 PLB1Q6P1J6 1458 aa11.06□□□□□ -0.64
RPN1-206ENST00000495462 ZCCHC11Q5TAX3 1644 aaKnown RBP11.06□□□□□ -0.64
RPN1-206ENST00000495462 SPDYE2BA6NHP3 402 aa11.05□□□□□ -0.64
RPN1-206ENST00000495462 SPDYE6P0CI01 402 aa11.05□□□□□ -0.64
RPN1-206ENST00000495462 GLI2P10070 1586 aa11.05□□□□□ -0.64
RPN1-206ENST00000495462 SPDYE2Q495Y8 402 aa11.05□□□□□ -0.64
RPN1-206ENST00000495462 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
RPN1-206ENST00000495462 COL17A1Q9UMD9 1497 aaPredicted RBP11.04□□□□□ -0.64
RPN1-206ENST00000495462 EPRSP07814 1512 aaKnown RBP11.04□□□□□ -0.64
RPN1-206ENST00000495462 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
RPN1-206ENST00000495462 MAP3K4Q9Y6R4 1608 aa11.01□□□□□ -0.65
RPN1-206ENST00000495462 ABCA8O94911 1581 aa11□□□□□ -0.65
RPN1-206ENST00000495462 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
RPN1-206ENST00000495462 GOLGA3Q08378 1498 aa10.98□□□□□ -0.65
RPN1-206ENST00000495462 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
RPN1-206ENST00000495462 WDR7Q9Y4E6 1490 aa10.97□□□□□ -0.65
RPN1-206ENST00000495462 SSUH2Q9Y2M2 353 aa10.96□□□□□ -0.65
RPN1-206ENST00000495462 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
RPN1-206ENST00000495462 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
RPN1-206ENST00000495462 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms