RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-218ENST00000494934 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
SRRM1-218ENST00000494934 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
SRRM1-218ENST00000494934 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
SRRM1-218ENST00000494934 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
SRRM1-218ENST00000494934 PYGBP11216 843 aa12.89□□□□□ -0.35
SRRM1-218ENST00000494934 PLCB2Q00722 1185 aa12.89□□□□□ -0.35
SRRM1-218ENST00000494934 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
SRRM1-218ENST00000494934 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
SRRM1-218ENST00000494934 EVX2Q03828 476 aa12.84□□□□□ -0.35
SRRM1-218ENST00000494934 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
SRRM1-218ENST00000494934 POTEHQ6S545 545 aa12.8□□□□□ -0.36
SRRM1-218ENST00000494934 KIF12Q96FN5 646 aa12.79□□□□□ -0.36
SRRM1-218ENST00000494934 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
SRRM1-218ENST00000494934 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-218ENST00000494934 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
SRRM1-218ENST00000494934 MAP3K13O43283 966 aa12.76□□□□□ -0.37
SRRM1-218ENST00000494934 ZNF579Q8NAF0 562 aaKnown RBP12.76□□□□□ -0.37
SRRM1-218ENST00000494934 HAX1O00165 279 aa12.74□□□□□ -0.37
SRRM1-218ENST00000494934 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
SRRM1-218ENST00000494934 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
SRRM1-218ENST00000494934 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
SRRM1-218ENST00000494934 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
SRRM1-218ENST00000494934 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
SRRM1-218ENST00000494934 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
SRRM1-218ENST00000494934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
SRRM1-218ENST00000494934 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
SRRM1-218ENST00000494934 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
SRRM1-218ENST00000494934 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
SRRM1-218ENST00000494934 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
SRRM1-218ENST00000494934 MS4A3Q96HJ5 214 aa12.64□□□□□ -0.39
SRRM1-218ENST00000494934 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
SRRM1-218ENST00000494934 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
SRRM1-218ENST00000494934 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
SRRM1-218ENST00000494934 BBXQ8WY36 941 aaPredicted RBP12.59□□□□□ -0.39
SRRM1-218ENST00000494934 GALR2O43603 387 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-218ENST00000494934 PSEN1P49768 467 aa12.58□□□□□ -0.4
SRRM1-218ENST00000494934 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
SRRM1-218ENST00000494934 STK25O00506 426 aa12.57□□□□□ -0.4
SRRM1-218ENST00000494934 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
SRRM1-218ENST00000494934 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
SRRM1-218ENST00000494934 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
SRRM1-218ENST00000494934 GABBR2O75899 941 aa12.5□□□□□ -0.41
SRRM1-218ENST00000494934 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-218ENST00000494934 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-218ENST00000494934 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
SRRM1-218ENST00000494934 CLCN6P51797 869 aa12.46□□□□□ -0.41
SRRM1-218ENST00000494934 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
SRRM1-218ENST00000494934 TIE1P35590 1138 aa12.45□□□□□ -0.42
SRRM1-218ENST00000494934 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
SRRM1-218ENST00000494934 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
SRRM1-218ENST00000494934 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
SRRM1-218ENST00000494934 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
SRRM1-218ENST00000494934 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
SRRM1-218ENST00000494934 EFCAB3Q8N7B9 438 aa12.41□□□□□ -0.42
SRRM1-218ENST00000494934 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
SRRM1-218ENST00000494934 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
SRRM1-218ENST00000494934 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
SRRM1-218ENST00000494934 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
SRRM1-218ENST00000494934 ATMINO43313 823 aaPredicted RBP12.37□□□□□ -0.43
SRRM1-218ENST00000494934 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
SRRM1-218ENST00000494934 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
SRRM1-218ENST00000494934 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
SRRM1-218ENST00000494934 BCANQ96GW7 911 aa12.35□□□□□ -0.43
SRRM1-218ENST00000494934 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
SRRM1-218ENST00000494934 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
SRRM1-218ENST00000494934 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
SRRM1-218ENST00000494934 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
SRRM1-218ENST00000494934 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
SRRM1-218ENST00000494934 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
SRRM1-218ENST00000494934 SOX12O15370 315 aa12.3□□□□□ -0.44
SRRM1-218ENST00000494934 MS4A4AQ96JQ5 239 aa12.3□□□□□ -0.44
SRRM1-218ENST00000494934 PPP1R37O75864 691 aa12.26□□□□□ -0.45
SRRM1-218ENST00000494934 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
SRRM1-218ENST00000494934 NLRP6P59044 892 aa12.23□□□□□ -0.45
SRRM1-218ENST00000494934 MKRN3Q13064 507 aaKnown RBP12.22□□□□□ -0.45
SRRM1-218ENST00000494934 DCBLD2Q96PD2 775 aa12.22□□□□□ -0.45
SRRM1-218ENST00000494934 IRX5P78411 483 aaPredicted RBP12.21□□□□□ -0.45
SRRM1-218ENST00000494934 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
SRRM1-218ENST00000494934 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
SRRM1-218ENST00000494934 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
SRRM1-218ENST00000494934 RYDENQ9NUL5 291 aaKnown RBP12.19□□□□□ -0.46
SRRM1-218ENST00000494934 IER5LQ5T953 404 aa12.17□□□□□ -0.46
SRRM1-218ENST00000494934 DPY19L2Q6NUT2 758 aa12.17□□□□□ -0.46
SRRM1-218ENST00000494934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.462e-8■■■□□ 16.7
SRRM1-218ENST00000494934 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
SRRM1-218ENST00000494934 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
SRRM1-218ENST00000494934 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
SRRM1-218ENST00000494934 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
SRRM1-218ENST00000494934 C7P10643 843 aa12.07□□□□□ -0.48
SRRM1-218ENST00000494934 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
SRRM1-218ENST00000494934 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
SRRM1-218ENST00000494934 PLCG2P16885 1265 aa12.03□□□□□ -0.48
SRRM1-218ENST00000494934 TMEM121BQ9BXQ6 578 aaPredicted RBP12.03□□□□□ -0.48
SRRM1-218ENST00000494934 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
SRRM1-218ENST00000494934 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
SRRM1-218ENST00000494934 SEC24BO95487 1268 aa11.99□□□□□ -0.49
SRRM1-218ENST00000494934 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
SRRM1-218ENST00000494934 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
SRRM1-218ENST00000494934 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms