RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PLCB2Q00722 1185 aa9.71□□□□□ -0.86
CLK1-213ENST00000492793 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
CLK1-213ENST00000492793 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
CLK1-213ENST00000492793 FARP1Q9Y4F1 1045 aaPredicted RBP9.7□□□□□ -0.86
CLK1-213ENST00000492793 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
CLK1-213ENST00000492793 PYGBP11216 843 aa9.67□□□□□ -0.86
CLK1-213ENST00000492793 FXR2P51116 673 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLK1-213ENST00000492793 BBXQ8WY36 941 aaPredicted RBP9.67□□□□□ -0.86
CLK1-213ENST00000492793 CFAP44Q96MT7 982 aa9.65□□□□□ -0.86
CLK1-213ENST00000492793 TAOK2Q9UL54 1235 aa9.65□□□□□ -0.86
CLK1-213ENST00000492793 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
CLK1-213ENST00000492793 PAXIP1Q6ZW49 1069 aaPredicted RBP9.64□□□□□ -0.87
CLK1-213ENST00000492793 RNF25Q96BH1 459 aaPredicted RBP9.63□□□□□ -0.87
CLK1-213ENST00000492793 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
CLK1-213ENST00000492793 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
CLK1-213ENST00000492793 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
CLK1-213ENST00000492793 STK25O00506 426 aa9.57□□□□□ -0.88
CLK1-213ENST00000492793 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
CLK1-213ENST00000492793 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
CLK1-213ENST00000492793 HS6ST3Q8IZP7 471 aa9.56□□□□□ -0.88
CLK1-213ENST00000492793 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
CLK1-213ENST00000492793 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
CLK1-213ENST00000492793 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.51□□□□□ -0.89
CLK1-213ENST00000492793 ZNF467Q7Z7K2 595 aaPredicted RBP9.51□□□□□ -0.89
CLK1-213ENST00000492793 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
CLK1-213ENST00000492793 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
CLK1-213ENST00000492793 CCDC61Q9Y6R9 512 aa9.5□□□□□ -0.89
CLK1-213ENST00000492793 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
CLK1-213ENST00000492793 CD44P16070 742 aaKnown RBP9.48□□□□□ -0.89
CLK1-213ENST00000492793 PCDHB8Q9UN66 801 aa9.48□□□□□ -0.89
CLK1-213ENST00000492793 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
CLK1-213ENST00000492793 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
CLK1-213ENST00000492793 SGIP1Q9BQI5 828 aa9.44□□□□□ -0.9
CLK1-213ENST00000492793 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
CLK1-213ENST00000492793 MAP3K13O43283 966 aa9.42□□□□□ -0.9
CLK1-213ENST00000492793 ZNF579Q8NAF0 562 aaKnown RBP9.42□□□□□ -0.9
CLK1-213ENST00000492793 PSEN1P49768 467 aa9.41□□□□□ -0.9
CLK1-213ENST00000492793 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
CLK1-213ENST00000492793 TSHZ2Q9NRE2 1034 aa9.41□□□□□ -0.9
CLK1-213ENST00000492793 KIF12Q96FN5 646 aa9.4□□□□□ -0.9
CLK1-213ENST00000492793 PHF12Q96QT6 1004 aa9.4□□□□□ -0.9
CLK1-213ENST00000492793 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.9
CLK1-213ENST00000492793 IFNL1Q8IU54 200 aa9.39□□□□□ -0.91
CLK1-213ENST00000492793 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
CLK1-213ENST00000492793 RYDENQ9NUL5 291 aaKnown RBP9.36□□□□□ -0.91
CLK1-213ENST00000492793 HAX1O00165 279 aa9.33□□□□□ -0.92
CLK1-213ENST00000492793 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
CLK1-213ENST00000492793 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
CLK1-213ENST00000492793 CABP2Q9NPB3 220 aa9.32□□□□□ -0.92
CLK1-213ENST00000492793 EVX2Q03828 476 aa9.3□□□□□ -0.92
CLK1-213ENST00000492793 GOLGA2Q08379 1002 aa9.3□□□□□ -0.92
CLK1-213ENST00000492793 MS4A3Q96HJ5 214 aa9.28□□□□□ -0.92
CLK1-213ENST00000492793 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
CLK1-213ENST00000492793 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
CLK1-213ENST00000492793 BCANQ96GW7 911 aa9.25□□□□□ -0.93
CLK1-213ENST00000492793 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
CLK1-213ENST00000492793 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
CLK1-213ENST00000492793 NLRP6P59044 892 aa9.22□□□□□ -0.93
CLK1-213ENST00000492793 SOX12O15370 315 aa9.21□□□□□ -0.94
CLK1-213ENST00000492793 PHF8Q9UPP1 1060 aa9.21□□□□□ -0.94
CLK1-213ENST00000492793 MKRN3Q13064 507 aaKnown RBP9.2□□□□□ -0.94
CLK1-213ENST00000492793 GALR2O43603 387 aaPredicted RBP9.18□□□□□ -0.94
CLK1-213ENST00000492793 TIE1P35590 1138 aa9.16□□□□□ -0.94
CLK1-213ENST00000492793 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
CLK1-213ENST00000492793 TTLL13PA6NNM8 815 aa9.14□□□□□ -0.95
CLK1-213ENST00000492793 PPP1R37O75864 691 aa9.14□□□□□ -0.95
CLK1-213ENST00000492793 FBXO22Q8NEZ5 403 aa9.14□□□□□ -0.95
CLK1-213ENST00000492793 NBR1Q14596 966 aa9.13□□□□□ -0.95
CLK1-213ENST00000492793 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
CLK1-213ENST00000492793 CLCN6P51797 869 aa9.12□□□□□ -0.95
CLK1-213ENST00000492793 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
CLK1-213ENST00000492793 CADPS2Q86UW7 1296 aa9.11□□□□□ -0.95
CLK1-213ENST00000492793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.1□□□□□ -0.951e-10■■□□□ 13.7
CLK1-213ENST00000492793 MS4A4AQ96JQ5 239 aa9.08□□□□□ -0.96
CLK1-213ENST00000492793 GABBR2O75899 941 aa9.06□□□□□ -0.96
CLK1-213ENST00000492793 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
CLK1-213ENST00000492793 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
CLK1-213ENST00000492793 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
CLK1-213ENST00000492793 ATMINO43313 823 aaPredicted RBP9.02□□□□□ -0.97
CLK1-213ENST00000492793 G3V3G9 751 aa9□□□□□ -0.97
CLK1-213ENST00000492793 PDE4AP27815 886 aa9□□□□□ -0.97
CLK1-213ENST00000492793 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
CLK1-213ENST00000492793 ASTLQ6HA08 431 aaPredicted RBP8.99□□□□□ -0.97
CLK1-213ENST00000492793 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
CLK1-213ENST00000492793 SEC24BO95487 1268 aa8.97□□□□□ -0.97
CLK1-213ENST00000492793 PLCG2P16885 1265 aa8.97□□□□□ -0.97
CLK1-213ENST00000492793 TPRNQ4KMQ1 711 aa8.97□□□□□ -0.97
CLK1-213ENST00000492793 KCNV2Q8TDN2 545 aa8.97□□□□□ -0.97
CLK1-213ENST00000492793 PRKCSHP14314 528 aaPredicted RBP8.96□□□□□ -0.98
CLK1-213ENST00000492793 OCEL1Q9H607 264 aa8.96□□□□□ -0.98
CLK1-213ENST00000492793 E2F4Q16254 413 aa8.95□□□□□ -0.98
CLK1-213ENST00000492793 IER5LQ5T953 404 aa8.95□□□□□ -0.98
CLK1-213ENST00000492793 NCKAP5LQ9HCH0 1330 aa8.95□□□□□ -0.98
CLK1-213ENST00000492793 DDX27Q96GQ7 796 aaKnown RBP8.94□□□□□ -0.98
CLK1-213ENST00000492793 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
CLK1-213ENST00000492793 ILDR1Q86SU0 546 aaPredicted RBP8.93□□□□□ -0.98
CLK1-213ENST00000492793 PDCD7Q8N8D1 485 aaKnown RBP8.93□□□□□ -0.98
CLK1-213ENST00000492793 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
CLK1-213ENST00000492793 LHX8Q68G74 356 aa8.91□□□□□ -0.98
CLK1-213ENST00000492793 CRISPLD2Q9H0B8 497 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms