RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 CUX1P39880 1505 aa11.61□□□□□ -0.55
RBBP4-214ENST00000492348 SOGA1O94964 1423 aa11.58□□□□□ -0.56
RBBP4-214ENST00000492348 SSUH2Q9Y2M2 353 aa11.58□□□□□ -0.56
RBBP4-214ENST00000492348 RUSC2Q8N2Y8 1516 aa11.58□□□□□ -0.56
RBBP4-214ENST00000492348 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
RBBP4-214ENST00000492348 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
RBBP4-214ENST00000492348 EEA1Q15075 1411 aa11.56□□□□□ -0.56
RBBP4-214ENST00000492348 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
RBBP4-214ENST00000492348 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
RBBP4-214ENST00000492348 KIF21BO75037 1637 aa11.55□□□□□ -0.56
RBBP4-214ENST00000492348 NESP48681 1621 aa11.53□□□□□ -0.56
RBBP4-214ENST00000492348 KIF21AQ7Z4S6 1674 aa11.53□□□□□ -0.56
RBBP4-214ENST00000492348 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
RBBP4-214ENST00000492348 FANCD2Q9BXW9 1451 aa11.48□□□□□ -0.57
RBBP4-214ENST00000492348 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
RBBP4-214ENST00000492348 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
RBBP4-214ENST00000492348 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
RBBP4-214ENST00000492348 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
RBBP4-214ENST00000492348 CEP164Q9UPV0 1460 aa11.42□□□□□ -0.58
RBBP4-214ENST00000492348 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
RBBP4-214ENST00000492348 ERICH3Q5RHP9 1530 aa11.4□□□□□ -0.58
RBBP4-214ENST00000492348 AKT1S1Q96B36 256 aa11.4□□□□□ -0.59
RBBP4-214ENST00000492348 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
RBBP4-214ENST00000492348 VASPP50552 380 aaPredicted RBP11.38□□□□□ -0.59
RBBP4-214ENST00000492348 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
RBBP4-214ENST00000492348 RAPGEF2Q9Y4G8 1499 aa11.37□□□□□ -0.59
RBBP4-214ENST00000492348 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
RBBP4-214ENST00000492348 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
RBBP4-214ENST00000492348 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
RBBP4-214ENST00000492348 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
RBBP4-214ENST00000492348 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
RBBP4-214ENST00000492348 CUX2O14529 1486 aa11.34□□□□□ -0.59
RBBP4-214ENST00000492348 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
RBBP4-214ENST00000492348 ABCA5Q8WWZ7 1642 aa11.34□□□□□ -0.59
RBBP4-214ENST00000492348 PDS5BQ9NTI5 1447 aa11.33□□□□□ -0.6
RBBP4-214ENST00000492348 ABCA10Q8WWZ4 1543 aa11.32□□□□□ -0.6
RBBP4-214ENST00000492348 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
RBBP4-214ENST00000492348 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
RBBP4-214ENST00000492348 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
RBBP4-214ENST00000492348 CUL7Q14999 1698 aa11.3□□□□□ -0.6
RBBP4-214ENST00000492348 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
RBBP4-214ENST00000492348 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-214ENST00000492348 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-214ENST00000492348 CTTNBP2Q8WZ74 1663 aa11.28□□□□□ -0.6
RBBP4-214ENST00000492348 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
RBBP4-214ENST00000492348 MRC2Q9UBG0 1479 aa11.27□□□□□ -0.61
RBBP4-214ENST00000492348 WDR62O43379 1518 aa11.26□□□□□ -0.61
RBBP4-214ENST00000492348 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
RBBP4-214ENST00000492348 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
RBBP4-214ENST00000492348 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
RBBP4-214ENST00000492348 CLIP1P30622 1438 aa11.23□□□□□ -0.61
RBBP4-214ENST00000492348 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
RBBP4-214ENST00000492348 IGF1RP08069 1367 aa11.22□□□□□ -0.61
RBBP4-214ENST00000492348 MIER1Q8N108 512 aa11.21□□□□□ -0.61
RBBP4-214ENST00000492348 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
RBBP4-214ENST00000492348 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
RBBP4-214ENST00000492348 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
RBBP4-214ENST00000492348 PCGF6Q9BYE7 350 aa11.17□□□□□ -0.62
RBBP4-214ENST00000492348 VPS8Q8N3P4 1428 aa11.17□□□□□ -0.62
RBBP4-214ENST00000492348 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
RBBP4-214ENST00000492348 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
RBBP4-214ENST00000492348 GAPVD1Q14C86 1478 aa11.16□□□□□ -0.62
RBBP4-214ENST00000492348 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
RBBP4-214ENST00000492348 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
RBBP4-214ENST00000492348 EIF4G3O43432 1585 aaKnown RBP11.15□□□□□ -0.62
RBBP4-214ENST00000492348 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
RBBP4-214ENST00000492348 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
RBBP4-214ENST00000492348 ARHGAP35Q9NRY4 1499 aa11.14□□□□□ -0.63
RBBP4-214ENST00000492348 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-214ENST00000492348 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
RBBP4-214ENST00000492348 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
RBBP4-214ENST00000492348 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
RBBP4-214ENST00000492348 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
RBBP4-214ENST00000492348 SAMD9Q5K651 1589 aa11.09□□□□□ -0.63
RBBP4-214ENST00000492348 CFAP43Q8NDM7 1665 aa11.09□□□□□ -0.63
RBBP4-214ENST00000492348 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
RBBP4-214ENST00000492348 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
RBBP4-214ENST00000492348 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
RBBP4-214ENST00000492348 LRRIQ1Q96JM4 1722 aa11.06□□□□□ -0.64
RBBP4-214ENST00000492348 PPARGC1BQ86YN6 1023 aaKnown RBP11.06□□□□□ -0.64
RBBP4-214ENST00000492348 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.643e-7■■■■■ 37.5
RBBP4-214ENST00000492348 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
RBBP4-214ENST00000492348 RANGAP1P46060 587 aaPredicted RBP11.03□□□□□ -0.64
RBBP4-214ENST00000492348 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
RBBP4-214ENST00000492348 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.65
RBBP4-214ENST00000492348 TIAM1Q13009 1591 aa11.02□□□□□ -0.65
RBBP4-214ENST00000492348 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
RBBP4-214ENST00000492348 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
RBBP4-214ENST00000492348 HRCP23327 699 aa10.98□□□□□ -0.65
RBBP4-214ENST00000492348 MAP3K1Q13233 1512 aa10.97□□□□□ -0.65
RBBP4-214ENST00000492348 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
RBBP4-214ENST00000492348 MAGI1Q96QZ7 1491 aaPredicted RBP10.97□□□□□ -0.65
RBBP4-214ENST00000492348 FYCO1Q9BQS8 1478 aa10.96□□□□□ -0.65
RBBP4-214ENST00000492348 CEP170Q5SW79 1584 aa10.96□□□□□ -0.66
RBBP4-214ENST00000492348 TTBK1Q5TCY1 1321 aaPredicted RBP10.96□□□□□ -0.66
RBBP4-214ENST00000492348 CHD1O14646 1710 aa10.96□□□□□ -0.66
RBBP4-214ENST00000492348 GRIN2AQ12879 1464 aa10.96□□□□□ -0.66
RBBP4-214ENST00000492348 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
RBBP4-214ENST00000492348 UGGT2Q9NYU1 1516 aa10.94□□□□□ -0.66
RBBP4-214ENST00000492348 SP7Q8TDD2 431 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms