RNA–Protein interactions for RNA: ENST00000492174.1

CAMSAP1-209, Transcript of calmodulin regulated spectrin associated protein 1, human

TSL 5

Gene CAMSAP1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMSAP1-209	ENST00000492174	STAG3	Q9UJ98	1225 aa		11.72	□□□□□ -0.53
CAMSAP1-209	ENST00000492174	REM2	Q8IYK8	340 aa	Predicted RBP	11.7	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	TRIM41	Q8WV44	630 aa		11.7	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	BIVM-ERCC5	R4GMW8	1640 aa		11.7	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	TOP2B	Q02880	1626 aa		11.69	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	ABCC8	Q09428	1581 aa		11.69	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	EEA1	Q15075	1411 aa		11.69	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	PDS5B	Q9NTI5	1447 aa		11.68	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.67	□□□□□ -0.54
CAMSAP1-209	ENST00000492174	FANCD2	Q9BXW9	1451 aa		11.63	□□□□□ -0.55
CAMSAP1-209	ENST00000492174	CEP164	Q9UPV0	1460 aa		11.61	□□□□□ -0.55
CAMSAP1-209	ENST00000492174	SYNJ1	O43426	1573 aa		11.61	□□□□□ -0.55
CAMSAP1-209	ENST00000492174	DNMBP	Q6XZF7	1577 aa		11.59	□□□□□ -0.55
CAMSAP1-209	ENST00000492174	VASP	P50552	380 aa	Predicted RBP	11.59	□□□□□ -0.55
CAMSAP1-209	ENST00000492174	CUX1	P39880	1505 aa		11.57	□□□□□ -0.56
CAMSAP1-209	ENST00000492174	PITPNM1	O00562	1244 aa		11.56	□□□□□ -0.56
CAMSAP1-209	ENST00000492174	NES	P48681	1621 aa		11.53	□□□□□ -0.56
CAMSAP1-209	ENST00000492174	TOPBP1	Q92547	1522 aa		11.51	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	WDR97	A6NE52	1622 aa		11.5	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	KIF21A	Q7Z4S6	1674 aa		11.5	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	MRC2	Q9UBG0	1479 aa		11.49	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	CLEC11A	Q9Y240	323 aa		11.48	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	KIF27	Q86VH2	1401 aa		11.47	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	WDR62	O43379	1518 aa		11.46	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	ABCA10	Q8WWZ4	1543 aa		11.46	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	FGD5	Q6ZNL6	1462 aa		11.46	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	PRR29	P0C7W0	189 aa		11.46	□□□□□ -0.57
CAMSAP1-209	ENST00000492174	KIF21B	O75037	1637 aa		11.46	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	URB2	Q14146	1524 aa	Known RBP	11.45	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	POLA1	P09884	1462 aa	Predicted RBP	11.44	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	ERICH3	Q5RHP9	1530 aa		11.43	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	SOGA1	O94964	1423 aa		11.42	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.41	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	CHRDL2	Q6WN34	429 aa		11.4	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	THOC2	Q8NI27	1593 aa	Known RBP	11.4	□□□□□ -0.58
CAMSAP1-209	ENST00000492174	ERCC6	Q03468	1493 aa		11.39	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	PLEKHG5	O94827	1062 aa		11.39	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	MIER1	Q8N108	512 aa		11.39	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	PLCD3	Q8N3E9	789 aa		11.39	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	GOLGA3	Q08378	1498 aa		11.38	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	PRX	Q9BXM0	1461 aa		11.38	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	FXR2	P51116	673 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	CREBZF	Q9NS37	354 aa		11.38	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.38	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	TARBP1	Q13395	1621 aa	Known RBP	11.38	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	IFT140	Q96RY7	1462 aa		11.38	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	CUL7	Q14999	1698 aa		11.36	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	ABCA5	Q8WWZ7	1642 aa		11.36	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	CUX2	O14529	1486 aa		11.36	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	TNIK	Q9UKE5	1360 aa		11.35	□□□□□ -0.59
CAMSAP1-209	ENST00000492174	RUSC2	Q8N2Y8	1516 aa		11.33	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	MNX1	P50219	401 aa	Predicted RBP	11.32	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.32	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	IGF1R	P08069	1367 aa		11.31	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	SPOCK2	Q92563	424 aa		11.29	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	GAPVD1	Q14C86	1478 aa		11.29	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	RAD54L2	Q9Y4B4	1467 aa		11.28	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	RAPGEF2	Q9Y4G8	1499 aa		11.28	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	PIP4P2	Q8N4L2	257 aa		11.28	□□□□□ -0.6
CAMSAP1-209	ENST00000492174	KLHL34	Q8N239	644 aa		11.26	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	CARMIL1	Q5VZK9	1371 aa		11.26	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	GRIN2B	Q13224	1484 aa		11.25	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.25	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	PRKAR2A	P13861	404 aa	Known RBP	11.24	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	PBRM1	Q86U86	1689 aa		11.24	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	LOC105371045	A0A1W2PR82	267 aa		11.22	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.22	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	FHAD1	B1AJZ9	1412 aa		11.21	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	NPM1	P06748	294 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
CAMSAP1-209	ENST00000492174	CEP162	Q5TB80	1403 aa		11.2	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	CHADL	Q6NUI6	762 aa		11.2	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.2	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	EIF4G3	O43432	1585 aa	Known RBP	11.2	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	NUBP1	P53384	320 aa		11.19	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	RTN4	Q9NQC3	1192 aa	Known RBP	11.19	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	ADAMTS12	P58397	1594 aa		11.19	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	CTTNBP2	Q8WZ74	1663 aa		11.17	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	TDRD9	Q8NDG6	1382 aa	Known RBP	11.17	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	UBTF	P17480	764 aa	Known RBP	11.17	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	EFCAB5	A4FU69	1503 aa		11.15	□□□□□ -0.62
CAMSAP1-209	ENST00000492174	CLIP1	P30622	1438 aa		11.14	□□□□□ -0.63
CAMSAP1-209	ENST00000492174	SYNJ2	O15056	1496 aa		11.13	□□□□□ -0.63
CAMSAP1-209	ENST00000492174	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.13	□□□□□ -0.63
CAMSAP1-209	ENST00000492174	AQR	O60306	1485 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CAMSAP1-209	ENST00000492174	GSE1	Q14687	1217 aa		11.1	□□□□□ -0.63
CAMSAP1-209	ENST00000492174	GRIN2A	Q12879	1464 aa		11.09	□□□□□ -0.63
CAMSAP1-209	ENST00000492174	VPS8	Q8N3P4	1428 aa		11.09	□□□□□ -0.63
CAMSAP1-209	ENST00000492174	SNAPC4	Q5SXM2	1469 aa		11.08	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	PKD2	Q13563	968 aa		11.08	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	KIAA0586	Q9BVV6	1533 aa		11.08	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	RASEF	Q8IZ41	740 aa		11.07	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	FAM212A	Q96EL1	285 aa		11.07	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	NUP160	Q12769	1436 aa		11.06	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	IQGAP2	Q13576	1575 aa		11.06	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	SAMD9	Q5K651	1589 aa		11.06	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	MAP3K1	Q13233	1512 aa		11.05	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	UGGT2	Q9NYU1	1516 aa		11.05	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	ARHGAP35	Q9NRY4	1499 aa		11.05	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	FMN1	Q68DA7	1419 aa		11.02	□□□□□ -0.64
CAMSAP1-209	ENST00000492174	ARAP1	Q96P48	1450 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms