RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
CNOT4-210ENST00000491203 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
CNOT4-210ENST00000491203 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
CNOT4-210ENST00000491203 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
CNOT4-210ENST00000491203 FANCD2Q9BXW9 1451 aa14.66□□□□□ -0.06
CNOT4-210ENST00000491203 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
CNOT4-210ENST00000491203 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
CNOT4-210ENST00000491203 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
CNOT4-210ENST00000491203 MRC2Q9UBG0 1479 aa14.55□□□□□ -0.08
CNOT4-210ENST00000491203 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
CNOT4-210ENST00000491203 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
CNOT4-210ENST00000491203 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
CNOT4-210ENST00000491203 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
CNOT4-210ENST00000491203 ABCC8Q09428 1581 aa14.48□□□□□ -0.09
CNOT4-210ENST00000491203 WDR62O43379 1518 aa14.47□□□□□ -0.09
CNOT4-210ENST00000491203 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
CNOT4-210ENST00000491203 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
CNOT4-210ENST00000491203 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
CNOT4-210ENST00000491203 CUX1P39880 1505 aa14.44□□□□□ -0.1
CNOT4-210ENST00000491203 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
CNOT4-210ENST00000491203 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
CNOT4-210ENST00000491203 EVX2Q03828 476 aa14.41□□□□□ -0.1
CNOT4-210ENST00000491203 CUX2O14529 1486 aa14.4□□□□□ -0.1
CNOT4-210ENST00000491203 HAX1O00165 279 aa14.4□□□□□ -0.1
CNOT4-210ENST00000491203 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
CNOT4-210ENST00000491203 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
CNOT4-210ENST00000491203 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
CNOT4-210ENST00000491203 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
CNOT4-210ENST00000491203 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
CNOT4-210ENST00000491203 POLA1P09884 1462 aaPredicted RBP14.34□□□□□ -0.11
CNOT4-210ENST00000491203 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
CNOT4-210ENST00000491203 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
CNOT4-210ENST00000491203 SOGA1O94964 1423 aa14.31□□□□□ -0.12
CNOT4-210ENST00000491203 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
CNOT4-210ENST00000491203 PROM2Q8N271 834 aa14.28□□□□□ -0.12
CNOT4-210ENST00000491203 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
CNOT4-210ENST00000491203 TARBP1Q13395 1621 aaKnown RBP14.25□□□□□ -0.13
CNOT4-210ENST00000491203 ABCA10Q8WWZ4 1543 aa14.22□□□□□ -0.13
CNOT4-210ENST00000491203 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
CNOT4-210ENST00000491203 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
CNOT4-210ENST00000491203 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
CNOT4-210ENST00000491203 FARP1Q9Y4F1 1045 aaPredicted RBP14.2□□□□□ -0.14
CNOT4-210ENST00000491203 TDRD9Q8NDG6 1382 aaKnown RBP14.2□□□□□ -0.14
CNOT4-210ENST00000491203 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
CNOT4-210ENST00000491203 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.146e-6■■■■□ 23.2
CNOT4-210ENST00000491203 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
CNOT4-210ENST00000491203 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
CNOT4-210ENST00000491203 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
CNOT4-210ENST00000491203 ABCA5Q8WWZ7 1642 aa14.13□□□□□ -0.15
CNOT4-210ENST00000491203 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
CNOT4-210ENST00000491203 RUSC2Q8N2Y8 1516 aa14.07□□□□□ -0.16
CNOT4-210ENST00000491203 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
CNOT4-210ENST00000491203 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
CNOT4-210ENST00000491203 EEA1Q15075 1411 aa14.06□□□□□ -0.16
CNOT4-210ENST00000491203 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
CNOT4-210ENST00000491203 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
CNOT4-210ENST00000491203 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
CNOT4-210ENST00000491203 IGF1RP08069 1367 aa14.04□□□□□ -0.16
CNOT4-210ENST00000491203 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
CNOT4-210ENST00000491203 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
CNOT4-210ENST00000491203 FKBP8Q14318 412 aa14.01□□□□□ -0.17
CNOT4-210ENST00000491203 GABBR2O75899 941 aa14□□□□□ -0.17
CNOT4-210ENST00000491203 FHAD1B1AJZ9 1412 aa13.99□□□□□ -0.17
CNOT4-210ENST00000491203 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
CNOT4-210ENST00000491203 CHMP7Q8WUX9 453 aaPredicted RBP13.98□□□□□ -0.17
CNOT4-210ENST00000491203 SYNJ2O15056 1496 aa13.98□□□□□ -0.17
CNOT4-210ENST00000491203 CUL7Q14999 1698 aa13.98□□□□□ -0.17
CNOT4-210ENST00000491203 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
CNOT4-210ENST00000491203 CHD1O14646 1710 aa13.92□□□□□ -0.18
CNOT4-210ENST00000491203 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
CNOT4-210ENST00000491203 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
CNOT4-210ENST00000491203 RAPGEF2Q9Y4G8 1499 aa13.92□□□□□ -0.18
CNOT4-210ENST00000491203 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
CNOT4-210ENST00000491203 KIF21BO75037 1637 aa13.86□□□□□ -0.19
CNOT4-210ENST00000491203 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
CNOT4-210ENST00000491203 NUP160Q12769 1436 aa13.84□□□□□ -0.19
CNOT4-210ENST00000491203 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
CNOT4-210ENST00000491203 CEP170Q5SW79 1584 aa13.83□□□□□ -0.2
CNOT4-210ENST00000491203 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
CNOT4-210ENST00000491203 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
CNOT4-210ENST00000491203 UBTFP17480 764 aaKnown RBP13.79□□□□□ -0.2
CNOT4-210ENST00000491203 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
CNOT4-210ENST00000491203 KIAA0586Q9BVV6 1533 aa13.78□□□□□ -0.2
CNOT4-210ENST00000491203 MIER1Q8N108 512 aa13.76□□□□□ -0.21
CNOT4-210ENST00000491203 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
CNOT4-210ENST00000491203 CTTNBP2Q8WZ74 1663 aa13.74□□□□□ -0.21
CNOT4-210ENST00000491203 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
CNOT4-210ENST00000491203 LOC105371045A0A1W2PR82 267 aa13.72□□□□□ -0.21
CNOT4-210ENST00000491203 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
CNOT4-210ENST00000491203 JPH4Q96JJ6 628 aa13.72□□□□□ -0.21
CNOT4-210ENST00000491203 CLCN6P51797 869 aa13.7□□□□□ -0.22
CNOT4-210ENST00000491203 TNIKQ9UKE5 1360 aa13.7□□□□□ -0.22
CNOT4-210ENST00000491203 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
CNOT4-210ENST00000491203 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
CNOT4-210ENST00000491203 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-210ENST00000491203 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
CNOT4-210ENST00000491203 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
CNOT4-210ENST00000491203 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
CNOT4-210ENST00000491203 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
CNOT4-210ENST00000491203 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms