RNA–Protein interactions for RNA: ENST00000490611.1

MTA3-217, Transcript of metastasis associated 1 family member 3, humanhuman

TSL 2

Gene MTA3, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA3-217ENST00000490611 MAMSTRQ6ZN01 415 aa14.26□□□□□ -0.13
MTA3-217ENST00000490611 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
MTA3-217ENST00000490611 MS4A3Q96HJ5 214 aa14.22□□□□□ -0.13
MTA3-217ENST00000490611 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
MTA3-217ENST00000490611 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
MTA3-217ENST00000490611 POTEJP0CG39 1038 aa14.13□□□□□ -0.15
MTA3-217ENST00000490611 SCUBE2Q9NQ36 999 aa14.13□□□□□ -0.15
MTA3-217ENST00000490611 FAM163AQ96GL9 167 aaPredicted RBP14.05□□□□□ -0.16
MTA3-217ENST00000490611 LCE2DQ5TA82 110 aaPredicted RBP14.04□□□□□ -0.16
MTA3-217ENST00000490611 ATN1P54259 1190 aaPredicted RBP14.03□□□□□ -0.16
MTA3-217ENST00000490611 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.17
MTA3-217ENST00000490611 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
MTA3-217ENST00000490611 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
MTA3-217ENST00000490611 BMP2KQ9NSY1 1161 aaPredicted RBP13.93□□□□□ -0.18
MTA3-217ENST00000490611 TIE1P35590 1138 aa13.91□□□□□ -0.18
MTA3-217ENST00000490611 POTEFA5A3E0 1075 aa13.9□□□□□ -0.18
MTA3-217ENST00000490611 SEC24BO95487 1268 aa13.84□□□□□ -0.19
MTA3-217ENST00000490611 MAP3K13O43283 966 aa13.83□□□□□ -0.2
MTA3-217ENST00000490611 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
MTA3-217ENST00000490611 PROM2Q8N271 834 aa13.83□□□□□ -0.2
MTA3-217ENST00000490611 TRPC6Q9Y210 931 aa13.83□□□□□ -0.2
MTA3-217ENST00000490611 CDAN1Q8IWY9 1227 aa13.8□□□□□ -0.2
MTA3-217ENST00000490611 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
MTA3-217ENST00000490611 COLQQ9Y215 455 aaPredicted RBP13.77□□□□□ -0.21
MTA3-217ENST00000490611 IER5LQ5T953 404 aa13.76□□□□□ -0.21
MTA3-217ENST00000490611 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
MTA3-217ENST00000490611 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
MTA3-217ENST00000490611 MIER1Q8N108 512 aa13.7□□□□□ -0.22
MTA3-217ENST00000490611 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
MTA3-217ENST00000490611 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
MTA3-217ENST00000490611 SLAIN1Q8ND83 568 aa13.66□□□□□ -0.22
MTA3-217ENST00000490611 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
MTA3-217ENST00000490611 ST18O60284 1047 aa13.63□□□□□ -0.23
MTA3-217ENST00000490611 PLCG2P16885 1265 aa13.57□□□□□ -0.24
MTA3-217ENST00000490611 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
MTA3-217ENST00000490611 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
MTA3-217ENST00000490611 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
MTA3-217ENST00000490611 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
MTA3-217ENST00000490611 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
MTA3-217ENST00000490611 MMRN1Q13201 1228 aa13.49□□□□□ -0.25
MTA3-217ENST00000490611 SNPHO15079 494 aa13.48□□□□□ -0.25
MTA3-217ENST00000490611 NUBP1P53384 320 aa13.46□□□□□ -0.25
MTA3-217ENST00000490611 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.25
MTA3-217ENST00000490611 SPNS2Q8IVW8 549 aa13.46□□□□□ -0.25
MTA3-217ENST00000490611 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
MTA3-217ENST00000490611 OCEL1Q9H607 264 aa13.41□□□□□ -0.26
MTA3-217ENST00000490611 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.4□□□□□ -0.26
MTA3-217ENST00000490611 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
MTA3-217ENST00000490611 EMP3P54852 163 aa13.24□□□□□ -0.29
MTA3-217ENST00000490611 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
MTA3-217ENST00000490611 PYGBP11216 843 aa13.21□□□□□ -0.29
MTA3-217ENST00000490611 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
MTA3-217ENST00000490611 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
MTA3-217ENST00000490611 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
MTA3-217ENST00000490611 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
MTA3-217ENST00000490611 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
MTA3-217ENST00000490611 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
MTA3-217ENST00000490611 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
MTA3-217ENST00000490611 KRTAP3-3Q9BYR6 98 aa13.13□□□□□ -0.31
MTA3-217ENST00000490611 KRTAP3-2Q9BYR7 98 aa13.13□□□□□ -0.31
MTA3-217ENST00000490611 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
MTA3-217ENST00000490611 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
MTA3-217ENST00000490611 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
MTA3-217ENST00000490611 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
MTA3-217ENST00000490611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.323e-8■□□□□ 9.6
MTA3-217ENST00000490611 GSE1Q14687 1217 aa13.01□□□□□ -0.33
MTA3-217ENST00000490611 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
MTA3-217ENST00000490611 G3V3G9 751 aa12.94□□□□□ -0.34
MTA3-217ENST00000490611 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
MTA3-217ENST00000490611 PSEN1P49768 467 aa12.94□□□□□ -0.34
MTA3-217ENST00000490611 FKBP8Q14318 412 aa12.93□□□□□ -0.34
MTA3-217ENST00000490611 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
MTA3-217ENST00000490611 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
MTA3-217ENST00000490611 HOXB3P14651 431 aaPredicted RBP12.89□□□□□ -0.35
MTA3-217ENST00000490611 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
MTA3-217ENST00000490611 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
MTA3-217ENST00000490611 BOLA1Q9Y3E2 137 aa12.88□□□□□ -0.35
MTA3-217ENST00000490611 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
MTA3-217ENST00000490611 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
MTA3-217ENST00000490611 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
MTA3-217ENST00000490611 ERBB3P21860 1342 aa12.86□□□□□ -0.35
MTA3-217ENST00000490611 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
MTA3-217ENST00000490611 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
MTA3-217ENST00000490611 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
MTA3-217ENST00000490611 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
MTA3-217ENST00000490611 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
MTA3-217ENST00000490611 VARS2Q5ST30 1063 aaKnown RBP12.74□□□□□ -0.37
MTA3-217ENST00000490611 PTGER2P43116 358 aa12.72□□□□□ -0.37
MTA3-217ENST00000490611 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
MTA3-217ENST00000490611 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
MTA3-217ENST00000490611 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
MTA3-217ENST00000490611 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
MTA3-217ENST00000490611 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
MTA3-217ENST00000490611 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
MTA3-217ENST00000490611 EFCAB3Q8N7B9 438 aa12.55□□□□□ -0.4
MTA3-217ENST00000490611 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
MTA3-217ENST00000490611 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.41
MTA3-217ENST00000490611 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
MTA3-217ENST00000490611 SOX12O15370 315 aa12.45□□□□□ -0.42
MTA3-217ENST00000490611 LSM11P83369 360 aaKnown RBP eCLIP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms