RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SLC39A7Q92504 469 aa10.39□□□□□ -0.75
R3HDM1-219ENST00000488035 ATMINO43313 823 aaPredicted RBP10.38□□□□□ -0.75
R3HDM1-219ENST00000488035 METRNQ9UJH8 293 aa10.38□□□□□ -0.75
R3HDM1-219ENST00000488035 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
R3HDM1-219ENST00000488035 MAMSTRQ6ZN01 415 aa10.36□□□□□ -0.75
R3HDM1-219ENST00000488035 LCE2DQ5TA82 110 aaPredicted RBP10.35□□□□□ -0.75
R3HDM1-219ENST00000488035 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
R3HDM1-219ENST00000488035 CCDC61Q9Y6R9 512 aa10.24□□□□□ -0.77
R3HDM1-219ENST00000488035 ATN1P54259 1190 aaPredicted RBP10.23□□□□□ -0.77
R3HDM1-219ENST00000488035 SCUBE2Q9NQ36 999 aa10.22□□□□□ -0.77
R3HDM1-219ENST00000488035 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
R3HDM1-219ENST00000488035 PROM2Q8N271 834 aa10.21□□□□□ -0.77
R3HDM1-219ENST00000488035 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
R3HDM1-219ENST00000488035 FAM163AQ96GL9 167 aaPredicted RBP10.2□□□□□ -0.78
R3HDM1-219ENST00000488035 EHMT2Q96KQ7 1210 aa10.2□□□□□ -0.78
R3HDM1-219ENST00000488035 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
R3HDM1-219ENST00000488035 TIE1P35590 1138 aa10.15□□□□□ -0.78
R3HDM1-219ENST00000488035 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
R3HDM1-219ENST00000488035 TSPYL2Q9H2G4 693 aaPredicted RBP10.13□□□□□ -0.79
R3HDM1-219ENST00000488035 MAP3K13O43283 966 aa10.06□□□□□ -0.8
R3HDM1-219ENST00000488035 COLQQ9Y215 455 aaPredicted RBP10.06□□□□□ -0.8
R3HDM1-219ENST00000488035 IER5LQ5T953 404 aa10.05□□□□□ -0.8
R3HDM1-219ENST00000488035 TTLL13PA6NNM8 815 aa10.04□□□□□ -0.8
R3HDM1-219ENST00000488035 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
R3HDM1-219ENST00000488035 SGIP1Q9BQI5 828 aa10.03□□□□□ -0.8
R3HDM1-219ENST00000488035 RASEFQ8IZ41 740 aa10□□□□□ -0.81
R3HDM1-219ENST00000488035 SEC24BO95487 1268 aa9.97□□□□□ -0.81
R3HDM1-219ENST00000488035 TRIM35Q9UPQ4 493 aa9.95□□□□□ -0.82
R3HDM1-219ENST00000488035 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
R3HDM1-219ENST00000488035 ST18O60284 1047 aa9.93□□□□□ -0.82
R3HDM1-219ENST00000488035 MIER1Q8N108 512 aa9.89□□□□□ -0.83
R3HDM1-219ENST00000488035 SLAIN1Q8ND83 568 aa9.89□□□□□ -0.83
R3HDM1-219ENST00000488035 PCDHB13Q9Y5F0 798 aa9.88□□□□□ -0.83
R3HDM1-219ENST00000488035 TMEM121BQ9BXQ6 578 aaPredicted RBP9.87□□□□□ -0.83
R3HDM1-219ENST00000488035 NUBP1P53384 320 aa9.85□□□□□ -0.83
R3HDM1-219ENST00000488035 IRX5P78411 483 aaPredicted RBP9.85□□□□□ -0.83
R3HDM1-219ENST00000488035 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
R3HDM1-219ENST00000488035 IFNL1Q8IU54 200 aa9.84□□□□□ -0.83
R3HDM1-219ENST00000488035 SPNS2Q8IVW8 549 aa9.82□□□□□ -0.84
R3HDM1-219ENST00000488035 PLCG2P16885 1265 aa9.81□□□□□ -0.84
R3HDM1-219ENST00000488035 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
R3HDM1-219ENST00000488035 ZBTB47Q9UFB7 747 aaPredicted RBP9.8□□□□□ -0.84
R3HDM1-219ENST00000488035 SNPHO15079 494 aa9.78□□□□□ -0.84
R3HDM1-219ENST00000488035 OCEL1Q9H607 264 aa9.76□□□□□ -0.85
R3HDM1-219ENST00000488035 PLCD3Q8N3E9 789 aa9.75□□□□□ -0.85
R3HDM1-219ENST00000488035 FAM212AQ96EL1 285 aa9.73□□□□□ -0.85
R3HDM1-219ENST00000488035 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
R3HDM1-219ENST00000488035 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
R3HDM1-219ENST00000488035 POTEB3A0JP26 581 aa9.66□□□□□ -0.86
R3HDM1-219ENST00000488035 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
R3HDM1-219ENST00000488035 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
R3HDM1-219ENST00000488035 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
R3HDM1-219ENST00000488035 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
R3HDM1-219ENST00000488035 EMP3P54852 163 aa9.57□□□□□ -0.88
R3HDM1-219ENST00000488035 L3MBTL3Q96JM7 780 aaPredicted RBP9.57□□□□□ -0.88
R3HDM1-219ENST00000488035 ILDR1Q86SU0 546 aaPredicted RBP9.56□□□□□ -0.88
R3HDM1-219ENST00000488035 PCDHB8Q9UN66 801 aa9.56□□□□□ -0.88
R3HDM1-219ENST00000488035 PYGBP11216 843 aa9.55□□□□□ -0.88
R3HDM1-219ENST00000488035 HS3ST6Q96QI5 342 aa9.55□□□□□ -0.88
R3HDM1-219ENST00000488035 C3orf67Q6ZVT6 689 aa9.54□□□□□ -0.88
R3HDM1-219ENST00000488035 DCAF8Q5TAQ9 597 aa9.53□□□□□ -0.88
R3HDM1-219ENST00000488035 FKBP8Q14318 412 aa9.52□□□□□ -0.89
R3HDM1-219ENST00000488035 ZNF467Q7Z7K2 595 aaPredicted RBP9.51□□□□□ -0.89
R3HDM1-219ENST00000488035 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
R3HDM1-219ENST00000488035 CHRM1P11229 460 aaPredicted RBP9.49□□□□□ -0.89
R3HDM1-219ENST00000488035 FAM205CA6NFA0 338 aa9.48□□□□□ -0.89
R3HDM1-219ENST00000488035 MKRN3Q13064 507 aaKnown RBP9.47□□□□□ -0.89
R3HDM1-219ENST00000488035 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
R3HDM1-219ENST00000488035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■■□□□ 14
R3HDM1-219ENST00000488035 GSE1Q14687 1217 aa9.43□□□□□ -0.9
R3HDM1-219ENST00000488035 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
R3HDM1-219ENST00000488035 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
R3HDM1-219ENST00000488035 PSEN1P49768 467 aa9.4□□□□□ -0.9
R3HDM1-219ENST00000488035 DPY19L2Q6NUT2 758 aa9.38□□□□□ -0.91
R3HDM1-219ENST00000488035 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
R3HDM1-219ENST00000488035 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
R3HDM1-219ENST00000488035 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
R3HDM1-219ENST00000488035 DOK7Q18PE1 504 aa9.32□□□□□ -0.92
R3HDM1-219ENST00000488035 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
R3HDM1-219ENST00000488035 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
R3HDM1-219ENST00000488035 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
R3HDM1-219ENST00000488035 ERBB3P21860 1342 aa9.29□□□□□ -0.92
R3HDM1-219ENST00000488035 ZSWIM6Q9HCJ5 1215 aa9.27□□□□□ -0.93
R3HDM1-219ENST00000488035 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
R3HDM1-219ENST00000488035 G3V3G9 751 aa9.25□□□□□ -0.93
R3HDM1-219ENST00000488035 PTGER2P43116 358 aa9.25□□□□□ -0.93
R3HDM1-219ENST00000488035 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
R3HDM1-219ENST00000488035 CABP2Q9NPB3 220 aa9.25□□□□□ -0.93
R3HDM1-219ENST00000488035 RIMBP2O15034 1052 aa9.24□□□□□ -0.93
R3HDM1-219ENST00000488035 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
R3HDM1-219ENST00000488035 GPR153Q6NV75 609 aa9.19□□□□□ -0.94
R3HDM1-219ENST00000488035 TMEM92Q6UXU6 159 aa9.17□□□□□ -0.94
R3HDM1-219ENST00000488035 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
R3HDM1-219ENST00000488035 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
R3HDM1-219ENST00000488035 MICALL2Q8IY33 904 aa9.14□□□□□ -0.95
R3HDM1-219ENST00000488035 EFCAB3Q8N7B9 438 aa9.11□□□□□ -0.95
R3HDM1-219ENST00000488035 IFNLR1Q8IU57 520 aaPredicted RBP9.08□□□□□ -0.96
R3HDM1-219ENST00000488035 TRIM41Q8WV44 630 aa9.08□□□□□ -0.96
R3HDM1-219ENST00000488035 SOX12O15370 315 aa9.07□□□□□ -0.96
R3HDM1-219ENST00000488035 ZNF316A6NFI3 1004 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms