RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
HDLBP-241ENST00000487169 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
HDLBP-241ENST00000487169 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
HDLBP-241ENST00000487169 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
HDLBP-241ENST00000487169 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDLBP-241ENST00000487169 ANP32AP39687 249 aaKnown RBP17.99■□□□□ 0.47
HDLBP-241ENST00000487169 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
HDLBP-241ENST00000487169 MIER1Q8N108 512 aa17.99■□□□□ 0.47
HDLBP-241ENST00000487169 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.477e-6■■□□□ 14.2
HDLBP-241ENST00000487169 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
HDLBP-241ENST00000487169 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
HDLBP-241ENST00000487169 WIZO95785 1651 aa17.95■□□□□ 0.46
HDLBP-241ENST00000487169 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
HDLBP-241ENST00000487169 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
HDLBP-241ENST00000487169 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
HDLBP-241ENST00000487169 CCDC136Q96JN2 1154 aa17.89■□□□□ 0.45
HDLBP-241ENST00000487169 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
HDLBP-241ENST00000487169 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
HDLBP-241ENST00000487169 ARID4BQ4LE39 1312 aaPredicted RBP17.85■□□□□ 0.45
HDLBP-241ENST00000487169 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
HDLBP-241ENST00000487169 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.45
HDLBP-241ENST00000487169 UPF2Q9HAU5 1272 aaKnown RBP17.83■□□□□ 0.44
HDLBP-241ENST00000487169 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
HDLBP-241ENST00000487169 SIN3AQ96ST3 1273 aa17.81■□□□□ 0.44
HDLBP-241ENST00000487169 CUX2O14529 1486 aa17.8■□□□□ 0.44
HDLBP-241ENST00000487169 SOGA1O94964 1423 aa17.79■□□□□ 0.44
HDLBP-241ENST00000487169 CARD11Q9BXL7 1154 aa17.79■□□□□ 0.44
HDLBP-241ENST00000487169 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
HDLBP-241ENST00000487169 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
HDLBP-241ENST00000487169 A0A0G2JS52 829 aa17.76■□□□□ 0.43
HDLBP-241ENST00000487169 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
HDLBP-241ENST00000487169 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
HDLBP-241ENST00000487169 CDCA8Q53HL2 280 aa17.74■□□□□ 0.43
HDLBP-241ENST00000487169 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
HDLBP-241ENST00000487169 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
HDLBP-241ENST00000487169 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
HDLBP-241ENST00000487169 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
HDLBP-241ENST00000487169 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
HDLBP-241ENST00000487169 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
HDLBP-241ENST00000487169 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
HDLBP-241ENST00000487169 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
HDLBP-241ENST00000487169 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
HDLBP-241ENST00000487169 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
HDLBP-241ENST00000487169 POGKQ9P215 609 aa17.65■□□□□ 0.42
HDLBP-241ENST00000487169 SMARCA4P51532 1647 aa17.64■□□□□ 0.42
HDLBP-241ENST00000487169 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
HDLBP-241ENST00000487169 MYH16Q9H6N6 1097 aa17.63■□□□□ 0.41
HDLBP-241ENST00000487169 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
HDLBP-241ENST00000487169 NEUROD2Q15784 382 aa17.62■□□□□ 0.41
HDLBP-241ENST00000487169 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
HDLBP-241ENST00000487169 MLECQ14165 292 aa17.61■□□□□ 0.41
HDLBP-241ENST00000487169 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-241ENST00000487169 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
HDLBP-241ENST00000487169 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
HDLBP-241ENST00000487169 TRHP20396 242 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-241ENST00000487169 ANP32BQ92688 251 aaKnown RBP17.58■□□□□ 0.4
HDLBP-241ENST00000487169 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
HDLBP-241ENST00000487169 GGT6Q6P531 493 aa17.57■□□□□ 0.4
HDLBP-241ENST00000487169 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
HDLBP-241ENST00000487169 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
HDLBP-241ENST00000487169 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
HDLBP-241ENST00000487169 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.4
HDLBP-241ENST00000487169 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.39
HDLBP-241ENST00000487169 PKD2Q13563 968 aa17.51■□□□□ 0.39
HDLBP-241ENST00000487169 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
HDLBP-241ENST00000487169 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
HDLBP-241ENST00000487169 TSHZ2Q9NRE2 1034 aa17.51■□□□□ 0.39
HDLBP-241ENST00000487169 KANK1Q14678 1352 aa17.5■□□□□ 0.39
HDLBP-241ENST00000487169 TMF1P82094 1093 aa17.49■□□□□ 0.39
HDLBP-241ENST00000487169 FOXD1Q16676 465 aa17.49■□□□□ 0.39
HDLBP-241ENST00000487169 ARXQ96QS3 562 aa17.49■□□□□ 0.39
HDLBP-241ENST00000487169 LAS1LQ9Y4W2 734 aaKnown RBP17.49■□□□□ 0.39
HDLBP-241ENST00000487169 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
HDLBP-241ENST00000487169 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
HDLBP-241ENST00000487169 NBR1Q14596 966 aa17.48■□□□□ 0.39
HDLBP-241ENST00000487169 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
HDLBP-241ENST00000487169 SAFB2Q14151 953 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDLBP-241ENST00000487169 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.39
HDLBP-241ENST00000487169 RUSC2Q8N2Y8 1516 aa17.45■□□□□ 0.38
HDLBP-241ENST00000487169 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
HDLBP-241ENST00000487169 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
HDLBP-241ENST00000487169 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
HDLBP-241ENST00000487169 HDGFP51858 240 aaKnown RBP17.44■□□□□ 0.38
HDLBP-241ENST00000487169 FMN1Q68DA7 1419 aa17.43■□□□□ 0.38
HDLBP-241ENST00000487169 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
HDLBP-241ENST00000487169 SOX12O15370 315 aa17.41■□□□□ 0.38
HDLBP-241ENST00000487169 NUP155O75694 1391 aa17.4■□□□□ 0.38
HDLBP-241ENST00000487169 STK26Q9P289 416 aa17.4■□□□□ 0.38
HDLBP-241ENST00000487169 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
HDLBP-241ENST00000487169 MPHOSPH9Q99550 1183 aa17.39■□□□□ 0.37
HDLBP-241ENST00000487169 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
HDLBP-241ENST00000487169 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
HDLBP-241ENST00000487169 KIF3BO15066 747 aa17.36■□□□□ 0.37
HDLBP-241ENST00000487169 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
HDLBP-241ENST00000487169 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
HDLBP-241ENST00000487169 HNRNPMP52272 730 aaKnown RBP eCLIP17.34■□□□□ 0.372e-7■■■■■ 33
HDLBP-241ENST00000487169 BECN1Q14457 450 aa17.34■□□□□ 0.37
HDLBP-241ENST00000487169 RGS3P49796 1198 aa17.33■□□□□ 0.36
HDLBP-241ENST00000487169 FHOD3Q2V2M9 1422 aa17.33■□□□□ 0.36
HDLBP-241ENST00000487169 ANKRD30AQ9BXX3 1397 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms