RNA–Protein interactions for RNA: ENST00000485324.1

SLC6A8-210, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 2,401 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-210ENST00000485324 MAP3K1Q13233 1512 aa29.94■■■□□ 2.38
SLC6A8-210ENST00000485324 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
SLC6A8-210ENST00000485324 PCF11O94913 1555 aaKnown RBP29.91■■■□□ 2.38
SLC6A8-210ENST00000485324 FHOD3Q2V2M9 1422 aa29.9■■■□□ 2.38
SLC6A8-210ENST00000485324 YTHDC1Q96MU7 727 aaKnown RBP29.9■■■□□ 2.38
SLC6A8-210ENST00000485324 ATP1B4Q9UN42 357 aaPredicted RBP29.89■■■□□ 2.38
SLC6A8-210ENST00000485324 PHLDB1Q86UU1 1377 aa29.88■■■□□ 2.37
SLC6A8-210ENST00000485324 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
SLC6A8-210ENST00000485324 URB2Q14146 1524 aaKnown RBP29.87■■■□□ 2.37
SLC6A8-210ENST00000485324 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
SLC6A8-210ENST00000485324 GTF3C3Q9Y5Q9 886 aa29.87■■■□□ 2.37
SLC6A8-210ENST00000485324 CFAP43Q8NDM7 1665 aa29.82■■■□□ 2.36
SLC6A8-210ENST00000485324 RAB3GAP2Q9H2M9 1393 aa29.82■■■□□ 2.36
SLC6A8-210ENST00000485324 LAMC3Q9Y6N6 1575 aa29.82■■■□□ 2.36
SLC6A8-210ENST00000485324 CUL7Q14999 1698 aa29.81■■■□□ 2.36
SLC6A8-210ENST00000485324 WDR97A6NE52 1622 aa29.78■■■□□ 2.36
SLC6A8-210ENST00000485324 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
SLC6A8-210ENST00000485324 CTTNBP2Q8WZ74 1663 aa29.77■■■□□ 2.36
SLC6A8-210ENST00000485324 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
SLC6A8-210ENST00000485324 EFCAB5A4FU69 1503 aa29.73■■■□□ 2.35
SLC6A8-210ENST00000485324 FYCO1Q9BQS8 1478 aa29.7■■■□□ 2.35
SLC6A8-210ENST00000485324 MAPKBP1O60336 1514 aa29.69■■■□□ 2.34
SLC6A8-210ENST00000485324 CASKIN1Q8WXD9 1431 aa29.68■■■□□ 2.34
SLC6A8-210ENST00000485324 SETD5Q9C0A6 1442 aa29.67■■■□□ 2.34
SLC6A8-210ENST00000485324 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
SLC6A8-210ENST00000485324 GAPVD1Q14C86 1478 aa29.63■■■□□ 2.33
SLC6A8-210ENST00000485324 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
SLC6A8-210ENST00000485324 PDS5BQ9NTI5 1447 aa29.63■■■□□ 2.33
SLC6A8-210ENST00000485324 AQRO60306 1485 aaKnown RBP eCLIP29.62■■■□□ 2.332e-13■■■■■ 36.5
SLC6A8-210ENST00000485324 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
SLC6A8-210ENST00000485324 FMN1Q68DA7 1419 aa29.56■■■□□ 2.32
SLC6A8-210ENST00000485324 SAMD9Q5K651 1589 aa29.51■■■□□ 2.32
SLC6A8-210ENST00000485324 SIN3AQ96ST3 1273 aa29.51■■■□□ 2.31
SLC6A8-210ENST00000485324 LRRIQ1Q96JM4 1722 aa29.5■■■□□ 2.31
SLC6A8-210ENST00000485324 TARBP1Q13395 1621 aaKnown RBP29.47■■■□□ 2.31
SLC6A8-210ENST00000485324 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.3
SLC6A8-210ENST00000485324 FGD6Q6ZV73 1430 aa29.44■■■□□ 2.3
SLC6A8-210ENST00000485324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.4■■■□□ 2.3
SLC6A8-210ENST00000485324 GRIN2BQ13224 1484 aa29.4■■■□□ 2.3
SLC6A8-210ENST00000485324 PELP1Q8IZL8 1130 aaKnown RBP29.37■■■□□ 2.29
SLC6A8-210ENST00000485324 PTPRKQ15262 1439 aa29.35■■■□□ 2.29
SLC6A8-210ENST00000485324 NCOA2Q15596 1464 aa29.33■■■□□ 2.29
SLC6A8-210ENST00000485324 PBRM1Q86U86 1689 aa29.32■■■□□ 2.28
SLC6A8-210ENST00000485324 MAGI3Q5TCQ9 1506 aa29.26■■■□□ 2.28
SLC6A8-210ENST00000485324 MYOM3Q5VTT5 1437 aa29.26■■■□□ 2.27
SLC6A8-210ENST00000485324 THOC2Q8NI27 1593 aaKnown RBP29.25■■■□□ 2.27
SLC6A8-210ENST00000485324 SUPT6HQ7KZ85 1726 aaKnown RBP29.24■■■□□ 2.27
SLC6A8-210ENST00000485324 CCDC18Q5T9S5 1454 aa29.24■■■□□ 2.27
SLC6A8-210ENST00000485324 EHBP1L1Q8N3D4 1523 aa29.22■■■□□ 2.27
SLC6A8-210ENST00000485324 ADAMTS12P58397 1594 aa29.21■■■□□ 2.27
SLC6A8-210ENST00000485324 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
SLC6A8-210ENST00000485324 HFM1A2PYH4 1435 aa29.2■■■□□ 2.26
SLC6A8-210ENST00000485324 PTPN23Q9H3S7 1636 aa29.2■■■□□ 2.26
SLC6A8-210ENST00000485324 IQGAP2Q13576 1575 aa29.19■■■□□ 2.26
SLC6A8-210ENST00000485324 UGGT2Q9NYU1 1516 aa29.18■■■□□ 2.26
SLC6A8-210ENST00000485324 KCNH8Q96L42 1107 aa29.16■■■□□ 2.26
SLC6A8-210ENST00000485324 HIRIP3Q9BW71 556 aaPredicted RBP29.16■■■□□ 2.26
SLC6A8-210ENST00000485324 NAIPQ13075 1403 aa29.16■■■□□ 2.26
SLC6A8-210ENST00000485324 ARID3CA6NKF2 412 aa29.15■■■□□ 2.26
SLC6A8-210ENST00000485324 PPP1R15AO75807 674 aaPredicted RBP29.15■■■□□ 2.26
SLC6A8-210ENST00000485324 ARHGEF11O15085 1522 aa29.14■■■□□ 2.25
SLC6A8-210ENST00000485324 ZNF608Q9ULD9 1512 aaPredicted RBP29.14■■■□□ 2.25
SLC6A8-210ENST00000485324 TIMELESSQ9UNS1 1208 aa29.13■■■□□ 2.25
SLC6A8-210ENST00000485324 DDX10Q13206 875 aaKnown RBP29.12■■■□□ 2.25
SLC6A8-210ENST00000485324 UACAQ9BZF9 1416 aa29.11■■■□□ 2.25
SLC6A8-210ENST00000485324 HECW1Q76N89 1606 aa29.11■■■□□ 2.25
SLC6A8-210ENST00000485324 CDK13Q14004 1512 aaKnown RBP29.1■■■□□ 2.25
SLC6A8-210ENST00000485324 EPRSP07814 1512 aaKnown RBP29.09■■■□□ 2.25
SLC6A8-210ENST00000485324 CHIC2Q9UKJ5 165 aa29.08■■■□□ 2.25
SLC6A8-210ENST00000485324 RRP7BPQ9NSQ0 103 aa29.06■■■□□ 2.24
SLC6A8-210ENST00000485324 TONSLQ96HA7 1378 aa29.04■■■□□ 2.24
SLC6A8-210ENST00000485324 WDR62O43379 1518 aa29.03■■■□□ 2.24
SLC6A8-210ENST00000485324 IFT140Q96RY7 1462 aa29■■■□□ 2.23
SLC6A8-210ENST00000485324 TCOF1Q13428 1488 aaKnown RBP28.99■■■□□ 2.23
SLC6A8-210ENST00000485324 KDM6BO15054 1643 aa28.94■■■□□ 2.22
SLC6A8-210ENST00000485324 DISP1Q96F81 1524 aa28.92■■■□□ 2.22
SLC6A8-210ENST00000485324 GCC2Q8IWJ2 1684 aa28.9■■■□□ 2.22
SLC6A8-210ENST00000485324 KIAA0556O60303 1618 aa28.89■■■□□ 2.22
SLC6A8-210ENST00000485324 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.22
SLC6A8-210ENST00000485324 DENND4BO75064 1496 aaPredicted RBP28.89■■■□□ 2.21
SLC6A8-210ENST00000485324 KDM5BQ9UGL1 1544 aa28.88■■■□□ 2.21
SLC6A8-210ENST00000485324 TRIM52Q96A61 297 aa28.88■■■□□ 2.21
SLC6A8-210ENST00000485324 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
SLC6A8-210ENST00000485324 MIA2Q96PC5 1412 aa28.86■■■□□ 2.21
SLC6A8-210ENST00000485324 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
SLC6A8-210ENST00000485324 SUPT16HQ9Y5B9 1047 aaKnown RBP28.84■■■□□ 2.21
SLC6A8-210ENST00000485324 NUP153P49790 1475 aaKnown RBP28.82■■■□□ 2.2
SLC6A8-210ENST00000485324 AKNAQ7Z591 1439 aa28.79■■■□□ 2.2
SLC6A8-210ENST00000485324 ZNF644Q9H582 1327 aaPredicted RBP28.79■■■□□ 2.2
SLC6A8-210ENST00000485324 RAPGEF6Q8TEU7 1601 aa28.77■■■□□ 2.2
SLC6A8-210ENST00000485324 FOXD1Q16676 465 aa28.77■■■□□ 2.2
SLC6A8-210ENST00000485324 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
SLC6A8-210ENST00000485324 MPHOSPH9Q99550 1183 aa28.75■■■□□ 2.19
SLC6A8-210ENST00000485324 DAPK1P53355 1430 aa28.73■■■□□ 2.19
SLC6A8-210ENST00000485324 ANP32CO43423 234 aa28.72■■■□□ 2.19
SLC6A8-210ENST00000485324 ABCC5O15440 1437 aa28.7■■■□□ 2.19
SLC6A8-210ENST00000485324 FBLN2P98095 1184 aa28.7■■■□□ 2.18
SLC6A8-210ENST00000485324 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.18
SLC6A8-210ENST00000485324 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
SLC6A8-210ENST00000485324 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms