RNA–Protein interactions for RNA: ENST00000484937.5

PATJ-208, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5

Gene PATJ, Length 4,990 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-208ENST00000484937 WDR43Q15061 677 aaKnown RBP eCLIP12.07□□□□□ -0.48
PATJ-208ENST00000484937 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
PATJ-208ENST00000484937 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
PATJ-208ENST00000484937 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
PATJ-208ENST00000484937 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
PATJ-208ENST00000484937 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
PATJ-208ENST00000484937 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
PATJ-208ENST00000484937 SMARCA2P51531 1590 aa12.02□□□□□ -0.48
PATJ-208ENST00000484937 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.48
PATJ-208ENST00000484937 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.48
PATJ-208ENST00000484937 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.49
PATJ-208ENST00000484937 CARMIL1Q5VZK9 1371 aa12.01□□□□□ -0.49
PATJ-208ENST00000484937 CCDC88BA6NC98 1476 aa12.01□□□□□ -0.49
PATJ-208ENST00000484937 CDCA8Q53HL2 280 aa12.01□□□□□ -0.49
PATJ-208ENST00000484937 VPS8Q8N3P4 1428 aa12□□□□□ -0.49
PATJ-208ENST00000484937 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
PATJ-208ENST00000484937 SOGA1O94964 1423 aa11.99□□□□□ -0.49
PATJ-208ENST00000484937 CUX2O14529 1486 aa11.98□□□□□ -0.49
PATJ-208ENST00000484937 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
PATJ-208ENST00000484937 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
PATJ-208ENST00000484937 ANP32BQ92688 251 aaKnown RBP11.96□□□□□ -0.5
PATJ-208ENST00000484937 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
PATJ-208ENST00000484937 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
PATJ-208ENST00000484937 BCL11AQ9H165 835 aa11.94□□□□□ -0.5
PATJ-208ENST00000484937 KCNH8Q96L42 1107 aa11.92□□□□□ -0.5
PATJ-208ENST00000484937 CARD11Q9BXL7 1154 aa11.91□□□□□ -0.5
PATJ-208ENST00000484937 SETD5Q9C0A6 1442 aa11.9□□□□□ -0.5
PATJ-208ENST00000484937 ERCC6Q03468 1493 aa11.9□□□□□ -0.51
PATJ-208ENST00000484937 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
PATJ-208ENST00000484937 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
PATJ-208ENST00000484937 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
PATJ-208ENST00000484937 ABCC8Q09428 1581 aa11.89□□□□□ -0.51
PATJ-208ENST00000484937 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
PATJ-208ENST00000484937 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
PATJ-208ENST00000484937 MYH16Q9H6N6 1097 aa11.87□□□□□ -0.51
PATJ-208ENST00000484937 SIN3AQ96ST3 1273 aa11.87□□□□□ -0.51
PATJ-208ENST00000484937 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
PATJ-208ENST00000484937 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
PATJ-208ENST00000484937 CCER2I3L3R5 266 aa11.85□□□□□ -0.51
PATJ-208ENST00000484937 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
PATJ-208ENST00000484937 WIZO95785 1651 aa11.84□□□□□ -0.51
PATJ-208ENST00000484937 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
PATJ-208ENST00000484937 EIF5BO60841 1220 aaKnown RBP11.84□□□□□ -0.51
PATJ-208ENST00000484937 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
PATJ-208ENST00000484937 BECN1Q14457 450 aa11.82□□□□□ -0.52
PATJ-208ENST00000484937 PPP4R2Q9NY27 417 aa11.81□□□□□ -0.52
PATJ-208ENST00000484937 CARMIL2Q6F5E8 1435 aa11.81□□□□□ -0.52
PATJ-208ENST00000484937 SUPT16HQ9Y5B9 1047 aaKnown RBP11.8□□□□□ -0.52
PATJ-208ENST00000484937 ANP32EQ9BTT0 268 aa11.8□□□□□ -0.52
PATJ-208ENST00000484937 KANK1Q14678 1352 aa11.8□□□□□ -0.52
PATJ-208ENST00000484937 RAPGEF2Q9Y4G8 1499 aa11.78□□□□□ -0.52
PATJ-208ENST00000484937 TMF1P82094 1093 aa11.78□□□□□ -0.52
PATJ-208ENST00000484937 NUDCQ9Y266 331 aa11.78□□□□□ -0.52
PATJ-208ENST00000484937 CADPSQ9ULU8 1353 aa11.78□□□□□ -0.52
PATJ-208ENST00000484937 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
PATJ-208ENST00000484937 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
PATJ-208ENST00000484937 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
PATJ-208ENST00000484937 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
PATJ-208ENST00000484937 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
PATJ-208ENST00000484937 MS4A1P11836 297 aa11.76□□□□□ -0.53
PATJ-208ENST00000484937 NBR1Q14596 966 aa11.76□□□□□ -0.53
PATJ-208ENST00000484937 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
PATJ-208ENST00000484937 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
PATJ-208ENST00000484937 MAPK8IP3Q9UPT6 1336 aa11.74□□□□□ -0.53
PATJ-208ENST00000484937 ERICH6BQ5W0A0 696 aa11.74□□□□□ -0.53
PATJ-208ENST00000484937 DCAF11Q8TEB1 546 aa11.74□□□□□ -0.53
PATJ-208ENST00000484937 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
PATJ-208ENST00000484937 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
PATJ-208ENST00000484937 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
PATJ-208ENST00000484937 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
PATJ-208ENST00000484937 POGKQ9P215 609 aa11.71□□□□□ -0.54
PATJ-208ENST00000484937 TDRD9Q8NDG6 1382 aaKnown RBP11.7□□□□□ -0.54
PATJ-208ENST00000484937 GOLGA6L22H0YM25 854 aa11.7□□□□□ -0.54
PATJ-208ENST00000484937 PKD2Q13563 968 aa11.7□□□□□ -0.54
PATJ-208ENST00000484937 RSPH4AQ5TD94 716 aa11.7□□□□□ -0.54
PATJ-208ENST00000484937 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
PATJ-208ENST00000484937 HDGFP51858 240 aaKnown RBP11.68□□□□□ -0.54
PATJ-208ENST00000484937 CASC1Q6TDU7 716 aa11.68□□□□□ -0.54
PATJ-208ENST00000484937 CCDC18Q5T9S5 1454 aa11.68□□□□□ -0.54
PATJ-208ENST00000484937 RALBP1Q15311 655 aa11.67□□□□□ -0.54
PATJ-208ENST00000484937 CC2D1BQ5T0F9 858 aaKnown RBP11.67□□□□□ -0.54
PATJ-208ENST00000484937 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
PATJ-208ENST00000484937 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
PATJ-208ENST00000484937 EFCAB2Q5VUJ9 269 aa11.66□□□□□ -0.54
PATJ-208ENST00000484937 ARID4BQ4LE39 1312 aaPredicted RBP11.66□□□□□ -0.54
PATJ-208ENST00000484937 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
PATJ-208ENST00000484937 NUP155O75694 1391 aa11.64□□□□□ -0.55
PATJ-208ENST00000484937 GLIPR1L2Q4G1C9 344 aa11.64□□□□□ -0.55
PATJ-208ENST00000484937 FHOD3Q2V2M9 1422 aa11.64□□□□□ -0.55
PATJ-208ENST00000484937 ROCK2O75116 1388 aaKnown RBP11.63□□□□□ -0.55
PATJ-208ENST00000484937 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
PATJ-208ENST00000484937 NEUROD2Q15784 382 aa11.62□□□□□ -0.55
PATJ-208ENST00000484937 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
PATJ-208ENST00000484937 EIF3AQ14152 1382 aaKnown RBP11.61□□□□□ -0.55
PATJ-208ENST00000484937 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
PATJ-208ENST00000484937 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
PATJ-208ENST00000484937 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
PATJ-208ENST00000484937 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
PATJ-208ENST00000484937 DHX57Q6P158 1386 aaKnown RBP11.59□□□□□ -0.55
PATJ-208ENST00000484937 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms