RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 GTPBP6O43824 516 aaPredicted RBP17.55■□□□□ 0.4
TTC3-218ENST00000484047 TMEM132AQ24JP5 1023 aa17.53■□□□□ 0.4
TTC3-218ENST00000484047 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
TTC3-218ENST00000484047 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
TTC3-218ENST00000484047 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
TTC3-218ENST00000484047 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
TTC3-218ENST00000484047 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
TTC3-218ENST00000484047 GSE1Q14687 1217 aa17.38■□□□□ 0.37
TTC3-218ENST00000484047 DSG3P32926 999 aa17.33■□□□□ 0.37
TTC3-218ENST00000484047 STK25O00506 426 aa17.33■□□□□ 0.36
TTC3-218ENST00000484047 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
TTC3-218ENST00000484047 NUBP1P53384 320 aa17.31■□□□□ 0.36
TTC3-218ENST00000484047 HOMEZQ8IX15 550 aa17.24■□□□□ 0.35
TTC3-218ENST00000484047 DCAF8Q5TAQ9 597 aa17.23■□□□□ 0.35
TTC3-218ENST00000484047 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
TTC3-218ENST00000484047 P3H3Q8IVL6 736 aa17.16■□□□□ 0.34
TTC3-218ENST00000484047 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
TTC3-218ENST00000484047 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
TTC3-218ENST00000484047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.13■□□□□ 0.33
TTC3-218ENST00000484047 STK24Q9Y6E0 443 aa17.13■□□□□ 0.33
TTC3-218ENST00000484047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
TTC3-218ENST00000484047 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
TTC3-218ENST00000484047 KCNV2Q8TDN2 545 aa17.09■□□□□ 0.33
TTC3-218ENST00000484047 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.33
TTC3-218ENST00000484047 RYDENQ9NUL5 291 aaKnown RBP17.08■□□□□ 0.32
TTC3-218ENST00000484047 SGIP1Q9BQI5 828 aa17.07■□□□□ 0.32
TTC3-218ENST00000484047 FAM212AQ96EL1 285 aa17.04■□□□□ 0.32
TTC3-218ENST00000484047 CHRM1P11229 460 aaPredicted RBP17.03■□□□□ 0.32
TTC3-218ENST00000484047 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.32
TTC3-218ENST00000484047 MNX1P50219 401 aaPredicted RBP16.95■□□□□ 0.3
TTC3-218ENST00000484047 WDR70Q9NW82 654 aa16.94■□□□□ 0.3
TTC3-218ENST00000484047 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
TTC3-218ENST00000484047 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
TTC3-218ENST00000484047 PYGBP11216 843 aa16.9■□□□□ 0.3
TTC3-218ENST00000484047 CREBZFQ9NS37 354 aa16.89■□□□□ 0.29
TTC3-218ENST00000484047 ZC3H15Q8WU90 426 aaKnown RBP16.86■□□□□ 0.29
TTC3-218ENST00000484047 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
TTC3-218ENST00000484047 SLC24A3Q9HC58 644 aa16.79■□□□□ 0.28
TTC3-218ENST00000484047 SPDYE1Q8NFV5 336 aaPredicted RBP16.73■□□□□ 0.27
TTC3-218ENST00000484047 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
TTC3-218ENST00000484047 SEMA3EO15041 775 aa16.69■□□□□ 0.26
TTC3-218ENST00000484047 PRR29P0C7W0 189 aa16.69■□□□□ 0.26
TTC3-218ENST00000484047 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
TTC3-218ENST00000484047 TESPA1A2RU30 521 aaPredicted RBP16.66■□□□□ 0.26
TTC3-218ENST00000484047 MFRPQ9BY79 579 aa16.63■□□□□ 0.25
TTC3-218ENST00000484047 E2F4Q16254 413 aa16.6■□□□□ 0.25
TTC3-218ENST00000484047 ZMYND10O75800 440 aa16.58■□□□□ 0.25
TTC3-218ENST00000484047 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
TTC3-218ENST00000484047 PPP1R37O75864 691 aa16.55■□□□□ 0.24
TTC3-218ENST00000484047 ZNF467Q7Z7K2 595 aaPredicted RBP16.55■□□□□ 0.24
TTC3-218ENST00000484047 PDAP1Q13442 181 aaKnown RBP16.53■□□□□ 0.24
TTC3-218ENST00000484047 UBTFP17480 764 aaKnown RBP16.53■□□□□ 0.24
TTC3-218ENST00000484047 PCDHB8Q9UN66 801 aa16.51■□□□□ 0.23
TTC3-218ENST00000484047 PCDHB13Q9Y5F0 798 aa16.51■□□□□ 0.23
TTC3-218ENST00000484047 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
TTC3-218ENST00000484047 BARGINQ6ZT62 677 aa16.43■□□□□ 0.22
TTC3-218ENST00000484047 TSPYL2Q9H2G4 693 aaPredicted RBP16.43■□□□□ 0.22
TTC3-218ENST00000484047 GPBP1L1Q9HC44 474 aaPredicted RBP16.43■□□□□ 0.22
TTC3-218ENST00000484047 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
TTC3-218ENST00000484047 PSEN1P49768 467 aa16.4■□□□□ 0.22
TTC3-218ENST00000484047 FBXO22Q8NEZ5 403 aa16.4■□□□□ 0.22
TTC3-218ENST00000484047 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
TTC3-218ENST00000484047 SMYD5Q6GMV2 418 aa16.37■□□□□ 0.21
TTC3-218ENST00000484047 ZMYND15Q9H091 742 aa16.37■□□□□ 0.21
TTC3-218ENST00000484047 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
TTC3-218ENST00000484047 EFCAB3Q8N7B9 438 aa16.32■□□□□ 0.2
TTC3-218ENST00000484047 AK7Q96M32 723 aa16.31■□□□□ 0.2
TTC3-218ENST00000484047 PHF8Q9UPP1 1060 aa16.31■□□□□ 0.2
TTC3-218ENST00000484047 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
TTC3-218ENST00000484047 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
TTC3-218ENST00000484047 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
TTC3-218ENST00000484047 NLRP6P59044 892 aa16.29■□□□□ 0.2
TTC3-218ENST00000484047 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
TTC3-218ENST00000484047 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
TTC3-218ENST00000484047 RBM26Q5T8P6 1007 aaKnown RBP16.26■□□□□ 0.19
TTC3-218ENST00000484047 KDM4CQ9H3R0 1056 aa16.26■□□□□ 0.19
TTC3-218ENST00000484047 ARIH1Q9Y4X5 557 aaPredicted RBP16.26■□□□□ 0.19
TTC3-218ENST00000484047 MFSD10Q14728 455 aa16.24■□□□□ 0.19
TTC3-218ENST00000484047 CABP2Q9NPB3 220 aa16.23■□□□□ 0.19
TTC3-218ENST00000484047 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
TTC3-218ENST00000484047 PITPNM1O00562 1244 aa16.23■□□□□ 0.19
TTC3-218ENST00000484047 SOX12O15370 315 aa16.21■□□□□ 0.19
TTC3-218ENST00000484047 PDE4AP27815 886 aa16.2■□□□□ 0.18
TTC3-218ENST00000484047 MLLT3P42568 568 aaPredicted RBP16.2■□□□□ 0.18
TTC3-218ENST00000484047 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
TTC3-218ENST00000484047 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
TTC3-218ENST00000484047 KRI1Q8N9T8 703 aaKnown RBP16.2■□□□□ 0.18
TTC3-218ENST00000484047 HRCP23327 699 aa16.19■□□□□ 0.18
TTC3-218ENST00000484047 CRISPLD2Q9H0B8 497 aa16.19■□□□□ 0.18
TTC3-218ENST00000484047 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
TTC3-218ENST00000484047 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
TTC3-218ENST00000484047 DDX27Q96GQ7 796 aaKnown RBP16.17■□□□□ 0.18
TTC3-218ENST00000484047 C1orf115Q9H7X2 142 aa16.17■□□□□ 0.18
TTC3-218ENST00000484047 ARID3AQ99856 593 aa16.16■□□□□ 0.18
TTC3-218ENST00000484047 TRIM66O15016 1216 aa16.15■□□□□ 0.18
TTC3-218ENST00000484047 CAMK2BQ13554 666 aa16.15■□□□□ 0.18
TTC3-218ENST00000484047 PDE4DQ08499 809 aa16.15■□□□□ 0.18
TTC3-218ENST00000484047 MKRN3Q13064 507 aaKnown RBP16.12■□□□□ 0.17
TTC3-218ENST00000484047 MS4A4AQ96JQ5 239 aa16.11■□□□□ 0.17
TTC3-218ENST00000484047 FARP1Q9Y4F1 1045 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms