RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
COL4A5-205ENST00000483338 FGD1P98174 961 aa10.8□□□□□ -0.68
COL4A5-205ENST00000483338 WIZO95785 1651 aa10.8□□□□□ -0.68
COL4A5-205ENST00000483338 IPO9Q96P70 1041 aaKnown RBP10.79□□□□□ -0.68
COL4A5-205ENST00000483338 PDE4CQ08493 712 aa10.79□□□□□ -0.68
COL4A5-205ENST00000483338 RBM10P98175 930 aaKnown RBP10.78□□□□□ -0.68
COL4A5-205ENST00000483338 AAMPQ13685 434 aa10.78□□□□□ -0.68
COL4A5-205ENST00000483338 SMARCA2P51531 1590 aa10.76□□□□□ -0.69
COL4A5-205ENST00000483338 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
COL4A5-205ENST00000483338 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-205ENST00000483338 NEFMP07197 916 aa10.74□□□□□ -0.69
COL4A5-205ENST00000483338 PPP4R2Q9NY27 417 aa10.73□□□□□ -0.69
COL4A5-205ENST00000483338 USP35Q9P2H5 1018 aa10.73□□□□□ -0.69
COL4A5-205ENST00000483338 ANP32AP39687 249 aaKnown RBP10.72□□□□□ -0.69
COL4A5-205ENST00000483338 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
COL4A5-205ENST00000483338 PDIA4P13667 645 aaKnown RBP10.71□□□□□ -0.7
COL4A5-205ENST00000483338 FAM43AQ8N2R8 423 aa10.7□□□□□ -0.7
COL4A5-205ENST00000483338 B4GALNT3Q6L9W6 998 aa10.69□□□□□ -0.7
COL4A5-205ENST00000483338 BCL11BQ9C0K0 894 aaPredicted RBP10.68□□□□□ -0.7
COL4A5-205ENST00000483338 LAS1LQ9Y4W2 734 aaKnown RBP10.68□□□□□ -0.7
COL4A5-205ENST00000483338 CEP162Q5TB80 1403 aa10.68□□□□□ -0.7
COL4A5-205ENST00000483338 UBTFP17480 764 aaKnown RBP10.67□□□□□ -0.7
COL4A5-205ENST00000483338 GSE1Q14687 1217 aa10.67□□□□□ -0.7
COL4A5-205ENST00000483338 AEBP2Q6ZN18 517 aaPredicted RBP10.67□□□□□ -0.7
COL4A5-205ENST00000483338 DHX57Q6P158 1386 aaKnown RBP10.66□□□□□ -0.7
COL4A5-205ENST00000483338 DDX10Q13206 875 aaKnown RBP10.66□□□□□ -0.7
COL4A5-205ENST00000483338 HSP90AA2PQ14568 343 aaPredicted RBP10.65□□□□□ -0.7
COL4A5-205ENST00000483338 CCDC88BA6NC98 1476 aa10.65□□□□□ -0.7
COL4A5-205ENST00000483338 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
COL4A5-205ENST00000483338 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.7
COL4A5-205ENST00000483338 RRP9O43818 475 aaKnown RBP10.63□□□□□ -0.71
COL4A5-205ENST00000483338 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
COL4A5-205ENST00000483338 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
COL4A5-205ENST00000483338 DCAF11Q8TEB1 546 aa10.59□□□□□ -0.71
COL4A5-205ENST00000483338 PPM1GO15355 546 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-205ENST00000483338 HMGXB3Q12766 1538 aa10.57□□□□□ -0.72
COL4A5-205ENST00000483338 PEG3Q9GZU2 1588 aa10.57□□□□□ -0.72
COL4A5-205ENST00000483338 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
COL4A5-205ENST00000483338 RRAGDQ9NQL2 400 aaPredicted RBP10.57□□□□□ -0.72
COL4A5-205ENST00000483338 PRDM4Q9UKN5 801 aa10.56□□□□□ -0.72
COL4A5-205ENST00000483338 EEA1Q15075 1411 aa10.56□□□□□ -0.72
COL4A5-205ENST00000483338 CADPSQ9ULU8 1353 aa10.55□□□□□ -0.72
COL4A5-205ENST00000483338 HSP90AA1P07900 732 aaKnown RBP10.55□□□□□ -0.72
COL4A5-205ENST00000483338 ANP32CO43423 234 aa10.55□□□□□ -0.72
COL4A5-205ENST00000483338 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
COL4A5-205ENST00000483338 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.72
COL4A5-205ENST00000483338 NFKBIBQ15653 356 aa10.51□□□□□ -0.73
COL4A5-205ENST00000483338 NAP1L5Q96NT1 182 aaPredicted RBP10.51□□□□□ -0.73
COL4A5-205ENST00000483338 NESP48681 1621 aa10.5□□□□□ -0.73
COL4A5-205ENST00000483338 RGS3P49796 1198 aa10.5□□□□□ -0.73
COL4A5-205ENST00000483338 SIN3AQ96ST3 1273 aa10.5□□□□□ -0.73
COL4A5-205ENST00000483338 TAF7LQ5H9L4 462 aa10.48□□□□□ -0.73
COL4A5-205ENST00000483338 ERCC6Q03468 1493 aa10.48□□□□□ -0.73
COL4A5-205ENST00000483338 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
COL4A5-205ENST00000483338 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
COL4A5-205ENST00000483338 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.73
COL4A5-205ENST00000483338 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
COL4A5-205ENST00000483338 WDR97A6NE52 1622 aa10.44□□□□□ -0.74
COL4A5-205ENST00000483338 HIRIP3Q9BW71 556 aaPredicted RBP10.44□□□□□ -0.74
COL4A5-205ENST00000483338 NAP1L2Q9ULW6 460 aaPredicted RBP10.43□□□□□ -0.74
COL4A5-205ENST00000483338 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
COL4A5-205ENST00000483338 CFTRP13569 1480 aa10.42□□□□□ -0.74
COL4A5-205ENST00000483338 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
COL4A5-205ENST00000483338 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
COL4A5-205ENST00000483338 GTF2E1P29083 439 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-205ENST00000483338 CHMP4BQ9H444 224 aaKnown RBP10.4□□□□□ -0.74
COL4A5-205ENST00000483338 CLCN1P35523 988 aa10.39□□□□□ -0.75
COL4A5-205ENST00000483338 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-205ENST00000483338 PDCL3Q9H2J4 239 aa10.39□□□□□ -0.75
COL4A5-205ENST00000483338 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-205ENST00000483338 ABCC8Q09428 1581 aa10.39□□□□□ -0.75
COL4A5-205ENST00000483338 PDE4AP27815 886 aa10.39□□□□□ -0.75
COL4A5-205ENST00000483338 FRAT2O75474 233 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-205ENST00000483338 BACH2Q9BYV9 841 aa10.37□□□□□ -0.75
COL4A5-205ENST00000483338 CEP164Q9UPV0 1460 aa10.37□□□□□ -0.75
COL4A5-205ENST00000483338 ARID4BQ4LE39 1312 aaPredicted RBP10.37□□□□□ -0.75
COL4A5-205ENST00000483338 MAPKBP1O60336 1514 aa10.37□□□□□ -0.75
COL4A5-205ENST00000483338 SLC4A3P48751 1232 aa10.35□□□□□ -0.75
COL4A5-205ENST00000483338 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
COL4A5-205ENST00000483338 AKNAQ7Z591 1439 aa10.34□□□□□ -0.75
COL4A5-205ENST00000483338 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
COL4A5-205ENST00000483338 TCERG1O14776 1098 aaKnown RBP10.33□□□□□ -0.76
COL4A5-205ENST00000483338 CLIP1P30622 1438 aa10.33□□□□□ -0.76
COL4A5-205ENST00000483338 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
COL4A5-205ENST00000483338 LAMC3Q9Y6N6 1575 aa10.32□□□□□ -0.76
COL4A5-205ENST00000483338 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
COL4A5-205ENST00000483338 CUX2O14529 1486 aa10.32□□□□□ -0.76
COL4A5-205ENST00000483338 FBLN2P98095 1184 aa10.32□□□□□ -0.76
COL4A5-205ENST00000483338 CCDC184Q52MB2 194 aa10.32□□□□□ -0.76
COL4A5-205ENST00000483338 SOGA1O94964 1423 aa10.32□□□□□ -0.76
COL4A5-205ENST00000483338 IPO4Q8TEX9 1081 aaKnown RBP10.31□□□□□ -0.76
COL4A5-205ENST00000483338 POGKQ9P215 609 aa10.31□□□□□ -0.76
COL4A5-205ENST00000483338 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
COL4A5-205ENST00000483338 RNF123Q5XPI4 1314 aa10.31□□□□□ -0.76
COL4A5-205ENST00000483338 CANXP27824 592 aaKnown RBP10.31□□□□□ -0.76
COL4A5-205ENST00000483338 FOXD1Q16676 465 aa10.28□□□□□ -0.76
COL4A5-205ENST00000483338 L1TD1Q5T7N2 865 aaKnown RBP10.28□□□□□ -0.76
COL4A5-205ENST00000483338 ZHX1Q9UKY1 873 aaPredicted RBP10.28□□□□□ -0.76
COL4A5-205ENST00000483338 GOLGA3Q08378 1498 aa10.28□□□□□ -0.76
COL4A5-205ENST00000483338 TPM2P07951 284 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms