RNA–Protein interactions for RNA: ENST00000481639.1

PHC3-208, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-208ENST00000481639 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
PHC3-208ENST00000481639 NUBP1P53384 320 aa13.68□□□□□ -0.22
PHC3-208ENST00000481639 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
PHC3-208ENST00000481639 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
PHC3-208ENST00000481639 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
PHC3-208ENST00000481639 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
PHC3-208ENST00000481639 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
PHC3-208ENST00000481639 MAP3K13O43283 966 aa13.52□□□□□ -0.25
PHC3-208ENST00000481639 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
PHC3-208ENST00000481639 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
PHC3-208ENST00000481639 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
PHC3-208ENST00000481639 LHX8Q68G74 356 aa13.44□□□□□ -0.26
PHC3-208ENST00000481639 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
PHC3-208ENST00000481639 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
PHC3-208ENST00000481639 PELP1Q8IZL8 1130 aaKnown RBP13.42□□□□□ -0.26
PHC3-208ENST00000481639 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
PHC3-208ENST00000481639 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
PHC3-208ENST00000481639 NISCHQ9Y2I1 1504 aa13.41□□□□□ -0.26
PHC3-208ENST00000481639 GSE1Q14687 1217 aa13.39□□□□□ -0.27
PHC3-208ENST00000481639 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
PHC3-208ENST00000481639 PYGBP11216 843 aa13.37□□□□□ -0.27
PHC3-208ENST00000481639 TIE1P35590 1138 aa13.37□□□□□ -0.27
PHC3-208ENST00000481639 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
PHC3-208ENST00000481639 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
PHC3-208ENST00000481639 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
PHC3-208ENST00000481639 SLC39A7Q92504 469 aa13.31□□□□□ -0.28
PHC3-208ENST00000481639 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
PHC3-208ENST00000481639 C7P10643 843 aa13.3□□□□□ -0.28
PHC3-208ENST00000481639 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
PHC3-208ENST00000481639 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
PHC3-208ENST00000481639 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
PHC3-208ENST00000481639 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
PHC3-208ENST00000481639 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
PHC3-208ENST00000481639 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
PHC3-208ENST00000481639 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
PHC3-208ENST00000481639 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
PHC3-208ENST00000481639 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
PHC3-208ENST00000481639 IER5LQ5T953 404 aa13.14□□□□□ -0.31
PHC3-208ENST00000481639 OTUD5Q96G74 571 aa13.13□□□□□ -0.31
PHC3-208ENST00000481639 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
PHC3-208ENST00000481639 COLQQ9Y215 455 aaPredicted RBP13.11□□□□□ -0.31
PHC3-208ENST00000481639 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
PHC3-208ENST00000481639 SEC24BO95487 1268 aa13.09□□□□□ -0.31
PHC3-208ENST00000481639 PSEN1P49768 467 aa13.06□□□□□ -0.32
PHC3-208ENST00000481639 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
PHC3-208ENST00000481639 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
PHC3-208ENST00000481639 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
PHC3-208ENST00000481639 PLCG2P16885 1265 aa12.99□□□□□ -0.33
PHC3-208ENST00000481639 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
PHC3-208ENST00000481639 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
PHC3-208ENST00000481639 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
PHC3-208ENST00000481639 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
PHC3-208ENST00000481639 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
PHC3-208ENST00000481639 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
PHC3-208ENST00000481639 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
PHC3-208ENST00000481639 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
PHC3-208ENST00000481639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.353e-7■■□□□ 11.7
PHC3-208ENST00000481639 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
PHC3-208ENST00000481639 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
PHC3-208ENST00000481639 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
PHC3-208ENST00000481639 PKD2Q13563 968 aa12.84□□□□□ -0.35
PHC3-208ENST00000481639 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.82□□□□□ -0.36
PHC3-208ENST00000481639 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
PHC3-208ENST00000481639 EFCAB3Q8N7B9 438 aa12.79□□□□□ -0.36
PHC3-208ENST00000481639 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
PHC3-208ENST00000481639 SLAIN1Q8ND83 568 aa12.76□□□□□ -0.37
PHC3-208ENST00000481639 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
PHC3-208ENST00000481639 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
PHC3-208ENST00000481639 RGL2O15211 777 aa12.73□□□□□ -0.37
PHC3-208ENST00000481639 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
PHC3-208ENST00000481639 SOX12O15370 315 aa12.7□□□□□ -0.38
PHC3-208ENST00000481639 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
PHC3-208ENST00000481639 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
PHC3-208ENST00000481639 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
PHC3-208ENST00000481639 LCE2DQ5TA82 110 aaPredicted RBP12.67□□□□□ -0.38
PHC3-208ENST00000481639 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
PHC3-208ENST00000481639 STK24Q9Y6E0 443 aa12.66□□□□□ -0.38
PHC3-208ENST00000481639 STK25O00506 426 aa12.65□□□□□ -0.38
PHC3-208ENST00000481639 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
PHC3-208ENST00000481639 POTEMA6NI47 508 aa12.62□□□□□ -0.39
PHC3-208ENST00000481639 G3V3G9 751 aa12.62□□□□□ -0.39
PHC3-208ENST00000481639 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
PHC3-208ENST00000481639 POTEGQ6S5H5 508 aa12.61□□□□□ -0.39
PHC3-208ENST00000481639 TMEM121BQ9BXQ6 578 aaPredicted RBP12.61□□□□□ -0.39
PHC3-208ENST00000481639 NLRP6P59044 892 aa12.57□□□□□ -0.4
PHC3-208ENST00000481639 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
PHC3-208ENST00000481639 SNPHO15079 494 aa12.55□□□□□ -0.4
PHC3-208ENST00000481639 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
PHC3-208ENST00000481639 ST18O60284 1047 aa12.54□□□□□ -0.4
PHC3-208ENST00000481639 MICALL2Q8IY33 904 aa12.54□□□□□ -0.4
PHC3-208ENST00000481639 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
PHC3-208ENST00000481639 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
PHC3-208ENST00000481639 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
PHC3-208ENST00000481639 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
PHC3-208ENST00000481639 CHGAP10645 457 aaKnown RBP12.42□□□□□ -0.42
PHC3-208ENST00000481639 HOXB3P14651 431 aaPredicted RBP12.39□□□□□ -0.43
PHC3-208ENST00000481639 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
PHC3-208ENST00000481639 PPP1R37O75864 691 aa12.35□□□□□ -0.43
PHC3-208ENST00000481639 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
PHC3-208ENST00000481639 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms