RNA–Protein interactions for RNA: ENST00000481037.5

RBM39-232, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-232ENST00000481037 RASEFQ8IZ41 740 aa18.18■□□□□ 0.5
RBM39-232ENST00000481037 LHX8Q68G74 356 aa18.17■□□□□ 0.5
RBM39-232ENST00000481037 MS4A3Q96HJ5 214 aa18.15■□□□□ 0.5
RBM39-232ENST00000481037 NUBP1P53384 320 aa18.08■□□□□ 0.48
RBM39-232ENST00000481037 KIF12Q96FN5 646 aa18.08■□□□□ 0.48
RBM39-232ENST00000481037 ASTLQ6HA08 431 aaPredicted RBP17.99■□□□□ 0.47
RBM39-232ENST00000481037 VASPP50552 380 aaPredicted RBP17.97■□□□□ 0.47
RBM39-232ENST00000481037 FAM212AQ96EL1 285 aa17.97■□□□□ 0.47
RBM39-232ENST00000481037 MAP3K13O43283 966 aa17.96■□□□□ 0.47
RBM39-232ENST00000481037 ATMINO43313 823 aaPredicted RBP17.94■□□□□ 0.46
RBM39-232ENST00000481037 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
RBM39-232ENST00000481037 SGIP1Q9BQI5 828 aa17.88■□□□□ 0.45
RBM39-232ENST00000481037 TRPC6Q9Y210 931 aa17.85■□□□□ 0.45
RBM39-232ENST00000481037 TIE1P35590 1138 aa17.84■□□□□ 0.45
RBM39-232ENST00000481037 SLC39A7Q92504 469 aa17.84■□□□□ 0.45
RBM39-232ENST00000481037 KLHL34Q8N239 644 aa17.83■□□□□ 0.44
RBM39-232ENST00000481037 PCDHB13Q9Y5F0 798 aa17.83■□□□□ 0.44
RBM39-232ENST00000481037 ATN1P54259 1190 aaPredicted RBP17.82■□□□□ 0.44
RBM39-232ENST00000481037 BMP2KQ9NSY1 1161 aaPredicted RBP17.82■□□□□ 0.44
RBM39-232ENST00000481037 METRNQ9UJH8 293 aa17.81■□□□□ 0.44
RBM39-232ENST00000481037 C7P10643 843 aa17.8■□□□□ 0.44
RBM39-232ENST00000481037 DCAF8Q5TAQ9 597 aa17.79■□□□□ 0.44
RBM39-232ENST00000481037 POTEB2H3BUK9 544 aa17.76■□□□□ 0.43
RBM39-232ENST00000481037 IFNL1Q8IU54 200 aa17.73■□□□□ 0.43
RBM39-232ENST00000481037 TTLL13PA6NNM8 815 aa17.72■□□□□ 0.43
RBM39-232ENST00000481037 PYGBP11216 843 aa17.68■□□□□ 0.42
RBM39-232ENST00000481037 GSE1Q14687 1217 aa17.68■□□□□ 0.42
RBM39-232ENST00000481037 OTUD5Q96G74 571 aa17.66■□□□□ 0.42
RBM39-232ENST00000481037 IFNLR1Q8IU57 520 aaPredicted RBP17.65■□□□□ 0.42
RBM39-232ENST00000481037 TRIM35Q9UPQ4 493 aa17.61■□□□□ 0.41
RBM39-232ENST00000481037 SPOCK2Q92563 424 aa17.59■□□□□ 0.41
RBM39-232ENST00000481037 POTEFA5A3E0 1075 aa17.57■□□□□ 0.4
RBM39-232ENST00000481037 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
RBM39-232ENST00000481037 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
RBM39-232ENST00000481037 IER5LQ5T953 404 aa17.55■□□□□ 0.4
RBM39-232ENST00000481037 PCDHB8Q9UN66 801 aa17.52■□□□□ 0.4
RBM39-232ENST00000481037 CHRM1P11229 460 aaPredicted RBP17.51■□□□□ 0.39
RBM39-232ENST00000481037 MAMSTRQ6ZN01 415 aa17.51■□□□□ 0.39
RBM39-232ENST00000481037 SEC24BO95487 1268 aa17.5■□□□□ 0.39
RBM39-232ENST00000481037 ZNF467Q7Z7K2 595 aaPredicted RBP17.48■□□□□ 0.39
RBM39-232ENST00000481037 COLQQ9Y215 455 aaPredicted RBP17.48■□□□□ 0.39
RBM39-232ENST00000481037 SCUBE2Q9NQ36 999 aa17.43■□□□□ 0.38
RBM39-232ENST00000481037 CIZ1Q9ULV3 898 aaPredicted RBP17.43■□□□□ 0.38
RBM39-232ENST00000481037 PLCG2P16885 1265 aa17.35■□□□□ 0.37
RBM39-232ENST00000481037 IRX5P78411 483 aaPredicted RBP17.35■□□□□ 0.37
RBM39-232ENST00000481037 PSEN1P49768 467 aa17.29■□□□□ 0.36
RBM39-232ENST00000481037 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
RBM39-232ENST00000481037 OCEL1Q9H607 264 aa17.27■□□□□ 0.36
RBM39-232ENST00000481037 PDAP1Q13442 181 aaKnown RBP17.26■□□□□ 0.35
RBM39-232ENST00000481037 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
RBM39-232ENST00000481037 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
RBM39-232ENST00000481037 PDCD7Q8N8D1 485 aaKnown RBP17.12■□□□□ 0.33
RBM39-232ENST00000481037 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
RBM39-232ENST00000481037 POTEMA6NI47 508 aa17.08■□□□□ 0.32
RBM39-232ENST00000481037 CABP2Q9NPB3 220 aa17.08■□□□□ 0.32
RBM39-232ENST00000481037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.08■□□□□ 0.328e-26■■■□□ 15.3
RBM39-232ENST00000481037 LCE2DQ5TA82 110 aaPredicted RBP17.05■□□□□ 0.32
RBM39-232ENST00000481037 POTEGQ6S5H5 508 aa17.05■□□□□ 0.32
RBM39-232ENST00000481037 FAM163AQ96GL9 167 aaPredicted RBP17.05■□□□□ 0.32
RBM39-232ENST00000481037 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
RBM39-232ENST00000481037 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
RBM39-232ENST00000481037 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.01■□□□□ 0.31
RBM39-232ENST00000481037 RIOK3O14730 519 aaKnown RBP17■□□□□ 0.31
RBM39-232ENST00000481037 RNF25Q96BH1 459 aaPredicted RBP17■□□□□ 0.31
RBM39-232ENST00000481037 C3orf67Q6ZVT6 689 aa16.94■□□□□ 0.3
RBM39-232ENST00000481037 VGFO15240 615 aaPredicted RBP16.92■□□□□ 0.3
RBM39-232ENST00000481037 EFCAB3Q8N7B9 438 aa16.9■□□□□ 0.3
RBM39-232ENST00000481037 DPY19L2Q6NUT2 758 aa16.89■□□□□ 0.29
RBM39-232ENST00000481037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.88■□□□□ 0.29
RBM39-232ENST00000481037 ZFP91Q96JP5 570 aaPredicted RBP16.88■□□□□ 0.29
RBM39-232ENST00000481037 PCDH10Q9P2E7 1040 aa16.84■□□□□ 0.29
RBM39-232ENST00000481037 BOLA1Q9Y3E2 137 aa16.83■□□□□ 0.28
RBM39-232ENST00000481037 SNPHO15079 494 aa16.82■□□□□ 0.28
RBM39-232ENST00000481037 ST18O60284 1047 aa16.82■□□□□ 0.28
RBM39-232ENST00000481037 G3V3G9 751 aa16.81■□□□□ 0.28
RBM39-232ENST00000481037 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
RBM39-232ENST00000481037 ECM2O94769 699 aaPredicted RBP16.79■□□□□ 0.28
RBM39-232ENST00000481037 SOX12O15370 315 aa16.78■□□□□ 0.28
RBM39-232ENST00000481037 PLSCR2Q9NRY7 297 aa16.76■□□□□ 0.27
RBM39-232ENST00000481037 PKD2Q13563 968 aa16.75■□□□□ 0.27
RBM39-232ENST00000481037 TMEM121BQ9BXQ6 578 aaPredicted RBP16.73■□□□□ 0.27
RBM39-232ENST00000481037 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
RBM39-232ENST00000481037 PHF8Q9UPP1 1060 aa16.68■□□□□ 0.26
RBM39-232ENST00000481037 MS4A4AQ96JQ5 239 aa16.66■□□□□ 0.26
RBM39-232ENST00000481037 STK24Q9Y6E0 443 aa16.66■□□□□ 0.26
RBM39-232ENST00000481037 RGL2O15211 777 aa16.65■□□□□ 0.26
RBM39-232ENST00000481037 STK25O00506 426 aa16.63■□□□□ 0.25
RBM39-232ENST00000481037 MICALL2Q8IY33 904 aa16.63■□□□□ 0.25
RBM39-232ENST00000481037 NLRP6P59044 892 aa16.6■□□□□ 0.25
RBM39-232ENST00000481037 CDAN1Q8IWY9 1227 aa16.6■□□□□ 0.25
RBM39-232ENST00000481037 FBXO22Q8NEZ5 403 aa16.56■□□□□ 0.24
RBM39-232ENST00000481037 MARVELD3Q96A59 401 aa16.55■□□□□ 0.24
RBM39-232ENST00000481037 MFRPQ9BY79 579 aa16.53■□□□□ 0.24
RBM39-232ENST00000481037 HOXB3P14651 431 aaPredicted RBP16.51■□□□□ 0.23
RBM39-232ENST00000481037 TMEM92Q6UXU6 159 aa16.49■□□□□ 0.23
RBM39-232ENST00000481037 EMP3P54852 163 aa16.48■□□□□ 0.23
RBM39-232ENST00000481037 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
RBM39-232ENST00000481037 ZNF710Q8N1W2 664 aa16.43■□□□□ 0.22
RBM39-232ENST00000481037 HOXB1P14653 301 aaPredicted RBP16.39■□□□□ 0.21
RBM39-232ENST00000481037 RIMBP2O15034 1052 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms