RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
RBM39-230ENST00000476806 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
RBM39-230ENST00000476806 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
RBM39-230ENST00000476806 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
RBM39-230ENST00000476806 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
RBM39-230ENST00000476806 CCDC88BA6NC98 1476 aa13.03□□□□□ -0.32
RBM39-230ENST00000476806 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
RBM39-230ENST00000476806 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
RBM39-230ENST00000476806 POTEIP0CG38 1075 aa12.92□□□□□ -0.34
RBM39-230ENST00000476806 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
RBM39-230ENST00000476806 PRDM2Q13029 1718 aa12.87□□□□□ -0.35
RBM39-230ENST00000476806 NESP48681 1621 aa12.85□□□□□ -0.35
RBM39-230ENST00000476806 CFTRP13569 1480 aa12.84□□□□□ -0.35
RBM39-230ENST00000476806 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
RBM39-230ENST00000476806 EEA1Q15075 1411 aa12.8□□□□□ -0.36
RBM39-230ENST00000476806 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
RBM39-230ENST00000476806 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
RBM39-230ENST00000476806 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
RBM39-230ENST00000476806 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.37
RBM39-230ENST00000476806 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
RBM39-230ENST00000476806 CLCN6P51797 869 aa12.76□□□□□ -0.37
RBM39-230ENST00000476806 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
RBM39-230ENST00000476806 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
RBM39-230ENST00000476806 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
RBM39-230ENST00000476806 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
RBM39-230ENST00000476806 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
RBM39-230ENST00000476806 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
RBM39-230ENST00000476806 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
RBM39-230ENST00000476806 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
RBM39-230ENST00000476806 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
RBM39-230ENST00000476806 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
RBM39-230ENST00000476806 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
RBM39-230ENST00000476806 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
RBM39-230ENST00000476806 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
RBM39-230ENST00000476806 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
RBM39-230ENST00000476806 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
RBM39-230ENST00000476806 CUX1P39880 1505 aa12.54□□□□□ -0.4
RBM39-230ENST00000476806 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
RBM39-230ENST00000476806 KIF27Q86VH2 1401 aa12.53□□□□□ -0.4
RBM39-230ENST00000476806 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
RBM39-230ENST00000476806 KIF21BO75037 1637 aa12.5□□□□□ -0.41
RBM39-230ENST00000476806 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
RBM39-230ENST00000476806 GOLGA3Q08378 1498 aa12.48□□□□□ -0.41
RBM39-230ENST00000476806 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
RBM39-230ENST00000476806 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
RBM39-230ENST00000476806 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
RBM39-230ENST00000476806 WDR97A6NE52 1622 aa12.46□□□□□ -0.41
RBM39-230ENST00000476806 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
RBM39-230ENST00000476806 FGD5Q6ZNL6 1462 aa12.44□□□□□ -0.42
RBM39-230ENST00000476806 SOGA1O94964 1423 aa12.44□□□□□ -0.42
RBM39-230ENST00000476806 WDR62O43379 1518 aa12.43□□□□□ -0.42
RBM39-230ENST00000476806 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
RBM39-230ENST00000476806 POTEMA6NI47 508 aa12.42□□□□□ -0.42
RBM39-230ENST00000476806 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
RBM39-230ENST00000476806 RIMBP3CA6NJZ7 1639 aa12.41□□□□□ -0.42
RBM39-230ENST00000476806 RIMBP3BA6NNM3 1639 aa12.41□□□□□ -0.42
RBM39-230ENST00000476806 RIMBP3Q9UFD9 1639 aa12.41□□□□□ -0.42
RBM39-230ENST00000476806 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
RBM39-230ENST00000476806 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.43
RBM39-230ENST00000476806 CUL7Q14999 1698 aa12.38□□□□□ -0.43
RBM39-230ENST00000476806 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
RBM39-230ENST00000476806 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
RBM39-230ENST00000476806 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
RBM39-230ENST00000476806 CYB5RLQ6IPT4 315 aa12.35□□□□□ -0.43
RBM39-230ENST00000476806 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
RBM39-230ENST00000476806 STAG3Q9UJ98 1225 aa12.34□□□□□ -0.43
RBM39-230ENST00000476806 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
RBM39-230ENST00000476806 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
RBM39-230ENST00000476806 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
RBM39-230ENST00000476806 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
RBM39-230ENST00000476806 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
RBM39-230ENST00000476806 RAPGEF2Q9Y4G8 1499 aa12.3□□□□□ -0.44
RBM39-230ENST00000476806 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
RBM39-230ENST00000476806 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
RBM39-230ENST00000476806 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
RBM39-230ENST00000476806 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
RBM39-230ENST00000476806 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.45
RBM39-230ENST00000476806 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
RBM39-230ENST00000476806 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
RBM39-230ENST00000476806 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
RBM39-230ENST00000476806 IGF1RP08069 1367 aa12.25□□□□□ -0.45
RBM39-230ENST00000476806 RAD54L2Q9Y4B4 1467 aa12.22□□□□□ -0.45
RBM39-230ENST00000476806 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
RBM39-230ENST00000476806 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
RBM39-230ENST00000476806 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
RBM39-230ENST00000476806 METRNQ9UJH8 293 aa12.22□□□□□ -0.45
RBM39-230ENST00000476806 GRIN2BQ13224 1484 aa12.21□□□□□ -0.45
RBM39-230ENST00000476806 CLIP1P30622 1438 aa12.21□□□□□ -0.45
RBM39-230ENST00000476806 ARAP1Q96P48 1450 aa12.2□□□□□ -0.46
RBM39-230ENST00000476806 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
RBM39-230ENST00000476806 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
RBM39-230ENST00000476806 FHAD1B1AJZ9 1412 aa12.19□□□□□ -0.46
RBM39-230ENST00000476806 EFCAB5A4FU69 1503 aa12.18□□□□□ -0.46
RBM39-230ENST00000476806 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
RBM39-230ENST00000476806 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
RBM39-230ENST00000476806 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
RBM39-230ENST00000476806 C7P10643 843 aa12.17□□□□□ -0.46
RBM39-230ENST00000476806 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
RBM39-230ENST00000476806 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
RBM39-230ENST00000476806 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms