RNA–Protein interactions for RNA: ENST00000476672.1

FXR1-212, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-212ENST00000476672 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
FXR1-212ENST00000476672 EEA1Q15075 1411 aa11.81□□□□□ -0.52
FXR1-212ENST00000476672 OTUD5Q96G74 571 aa11.81□□□□□ -0.52
FXR1-212ENST00000476672 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
FXR1-212ENST00000476672 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
FXR1-212ENST00000476672 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
FXR1-212ENST00000476672 SOGA1O94964 1423 aa11.77□□□□□ -0.52
FXR1-212ENST00000476672 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
FXR1-212ENST00000476672 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
FXR1-212ENST00000476672 BIVM-ERCC5R4GMW8 1640 aa11.74□□□□□ -0.53
FXR1-212ENST00000476672 SPDYE2BA6NHP3 402 aa11.73□□□□□ -0.53
FXR1-212ENST00000476672 SPDYE6P0CI01 402 aa11.73□□□□□ -0.53
FXR1-212ENST00000476672 CLCN6P51797 869 aa11.73□□□□□ -0.53
FXR1-212ENST00000476672 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
FXR1-212ENST00000476672 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
FXR1-212ENST00000476672 RUSC2Q8N2Y8 1516 aa11.71□□□□□ -0.53
FXR1-212ENST00000476672 KCNA4P22459 653 aa11.71□□□□□ -0.53
FXR1-212ENST00000476672 CHADLQ6NUI6 762 aa11.71□□□□□ -0.53
FXR1-212ENST00000476672 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
FXR1-212ENST00000476672 CUX1P39880 1505 aa11.7□□□□□ -0.54
FXR1-212ENST00000476672 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
FXR1-212ENST00000476672 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
FXR1-212ENST00000476672 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
FXR1-212ENST00000476672 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
FXR1-212ENST00000476672 TNIKQ9UKE5 1360 aa11.64□□□□□ -0.55
FXR1-212ENST00000476672 NESP48681 1621 aa11.64□□□□□ -0.55
FXR1-212ENST00000476672 CD44P16070 742 aaKnown RBP11.63□□□□□ -0.55
FXR1-212ENST00000476672 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
FXR1-212ENST00000476672 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
FXR1-212ENST00000476672 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
FXR1-212ENST00000476672 KIF21BO75037 1637 aa11.6□□□□□ -0.55
FXR1-212ENST00000476672 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
FXR1-212ENST00000476672 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
FXR1-212ENST00000476672 DNMBPQ6XZF7 1577 aa11.57□□□□□ -0.56
FXR1-212ENST00000476672 FGD5Q6ZNL6 1462 aa11.57□□□□□ -0.56
FXR1-212ENST00000476672 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
FXR1-212ENST00000476672 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
FXR1-212ENST00000476672 CEP162Q5TB80 1403 aa11.53□□□□□ -0.56
FXR1-212ENST00000476672 ERICH3Q5RHP9 1530 aa11.52□□□□□ -0.57
FXR1-212ENST00000476672 IGF1RP08069 1367 aa11.52□□□□□ -0.57
FXR1-212ENST00000476672 CUX2O14529 1486 aa11.51□□□□□ -0.57
FXR1-212ENST00000476672 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
FXR1-212ENST00000476672 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
FXR1-212ENST00000476672 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
FXR1-212ENST00000476672 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
FXR1-212ENST00000476672 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
FXR1-212ENST00000476672 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
FXR1-212ENST00000476672 RAD54L2Q9Y4B4 1467 aa11.47□□□□□ -0.57
FXR1-212ENST00000476672 PCGF6Q9BYE7 350 aa11.46□□□□□ -0.57
FXR1-212ENST00000476672 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
FXR1-212ENST00000476672 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
FXR1-212ENST00000476672 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
FXR1-212ENST00000476672 CARMIL1Q5VZK9 1371 aa11.44□□□□□ -0.58
FXR1-212ENST00000476672 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
FXR1-212ENST00000476672 CLIP1P30622 1438 aa11.43□□□□□ -0.58
FXR1-212ENST00000476672 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
FXR1-212ENST00000476672 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
FXR1-212ENST00000476672 ZNF692Q9BU19 519 aaPredicted RBP11.41□□□□□ -0.58
FXR1-212ENST00000476672 FBLN2P98095 1184 aa11.4□□□□□ -0.58
FXR1-212ENST00000476672 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
FXR1-212ENST00000476672 TARBP1Q13395 1621 aaKnown RBP11.36□□□□□ -0.59
FXR1-212ENST00000476672 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
FXR1-212ENST00000476672 TDRD9Q8NDG6 1382 aaKnown RBP11.36□□□□□ -0.59
FXR1-212ENST00000476672 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
FXR1-212ENST00000476672 WDR62O43379 1518 aa11.35□□□□□ -0.59
FXR1-212ENST00000476672 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
FXR1-212ENST00000476672 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
FXR1-212ENST00000476672 CUL7Q14999 1698 aa11.34□□□□□ -0.59
FXR1-212ENST00000476672 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
FXR1-212ENST00000476672 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
FXR1-212ENST00000476672 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
FXR1-212ENST00000476672 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
FXR1-212ENST00000476672 PPARGC1BQ86YN6 1023 aaKnown RBP11.3□□□□□ -0.6
FXR1-212ENST00000476672 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
FXR1-212ENST00000476672 ARAP1Q96P48 1450 aa11.3□□□□□ -0.6
FXR1-212ENST00000476672 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
FXR1-212ENST00000476672 ARHGAP35Q9NRY4 1499 aa11.29□□□□□ -0.6
FXR1-212ENST00000476672 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
FXR1-212ENST00000476672 AQRO60306 1485 aaKnown RBP eCLIP11.26□□□□□ -0.612e-8■□□□□ 8.5
FXR1-212ENST00000476672 GRIN2BQ13224 1484 aa11.26□□□□□ -0.61
FXR1-212ENST00000476672 THOC2Q8NI27 1593 aaKnown RBP11.26□□□□□ -0.61
FXR1-212ENST00000476672 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
FXR1-212ENST00000476672 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
FXR1-212ENST00000476672 HRCP23327 699 aa11.24□□□□□ -0.61
FXR1-212ENST00000476672 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
FXR1-212ENST00000476672 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
FXR1-212ENST00000476672 ZNF608Q9ULD9 1512 aaPredicted RBP11.22□□□□□ -0.61
FXR1-212ENST00000476672 CDAN1Q8IWY9 1227 aa11.21□□□□□ -0.61
FXR1-212ENST00000476672 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
FXR1-212ENST00000476672 EFCAB5A4FU69 1503 aa11.2□□□□□ -0.62
FXR1-212ENST00000476672 ADAMTS12P58397 1594 aa11.19□□□□□ -0.62
FXR1-212ENST00000476672 CTTNBP2Q8WZ74 1663 aa11.18□□□□□ -0.62
FXR1-212ENST00000476672 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
FXR1-212ENST00000476672 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
FXR1-212ENST00000476672 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
FXR1-212ENST00000476672 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
FXR1-212ENST00000476672 EIF4G3O43432 1585 aaKnown RBP11.15□□□□□ -0.62
FXR1-212ENST00000476672 SNAPC4Q5SXM2 1469 aa11.14□□□□□ -0.63
FXR1-212ENST00000476672 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
FXR1-212ENST00000476672 SAMD9Q5K651 1589 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms