RNA–Protein interactions for RNA: ENST00000476502.1

TRBV1-201, Transcript of T cell receptor beta variable 1 (pseudogene), humanhuman

BASIC

Gene TRBV1, Length 284 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV1-201ENST00000476502 ASTLQ6HA08 431 aaPredicted RBP10.07□□□□□ -0.8
TRBV1-201ENST00000476502 SLC39A7Q92504 469 aa10.07□□□□□ -0.8
TRBV1-201ENST00000476502 PCDH10Q9P2E7 1040 aa10.06□□□□□ -0.8
TRBV1-201ENST00000476502 MAMSTRQ6ZN01 415 aa10.05□□□□□ -0.8
TRBV1-201ENST00000476502 MS4A3Q96HJ5 214 aa10.05□□□□□ -0.8
TRBV1-201ENST00000476502 ATMINO43313 823 aaPredicted RBP10.03□□□□□ -0.8
TRBV1-201ENST00000476502 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
TRBV1-201ENST00000476502 SCUBE2Q9NQ36 999 aa9.97□□□□□ -0.81
TRBV1-201ENST00000476502 POTEJP0CG39 1038 aa9.96□□□□□ -0.82
TRBV1-201ENST00000476502 ATN1P54259 1190 aaPredicted RBP9.92□□□□□ -0.82
TRBV1-201ENST00000476502 FAM163AQ96GL9 167 aaPredicted RBP9.92□□□□□ -0.82
TRBV1-201ENST00000476502 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
TRBV1-201ENST00000476502 KIF12Q96FN5 646 aa9.88□□□□□ -0.83
TRBV1-201ENST00000476502 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
TRBV1-201ENST00000476502 LCE2DQ5TA82 110 aaPredicted RBP9.85□□□□□ -0.83
TRBV1-201ENST00000476502 BMP2KQ9NSY1 1161 aaPredicted RBP9.85□□□□□ -0.83
TRBV1-201ENST00000476502 TIE1P35590 1138 aa9.83□□□□□ -0.84
TRBV1-201ENST00000476502 PROM2Q8N271 834 aa9.82□□□□□ -0.84
TRBV1-201ENST00000476502 MAP3K13O43283 966 aa9.81□□□□□ -0.84
TRBV1-201ENST00000476502 SEC24BO95487 1268 aa9.81□□□□□ -0.84
TRBV1-201ENST00000476502 POTEFA5A3E0 1075 aa9.8□□□□□ -0.84
TRBV1-201ENST00000476502 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
TRBV1-201ENST00000476502 MIER1Q8N108 512 aa9.78□□□□□ -0.84
TRBV1-201ENST00000476502 TTLL13PA6NNM8 815 aa9.75□□□□□ -0.85
TRBV1-201ENST00000476502 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
TRBV1-201ENST00000476502 COLQQ9Y215 455 aaPredicted RBP9.73□□□□□ -0.85
TRBV1-201ENST00000476502 IER5LQ5T953 404 aa9.72□□□□□ -0.85
TRBV1-201ENST00000476502 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.86
TRBV1-201ENST00000476502 SGIP1Q9BQI5 828 aa9.71□□□□□ -0.86
TRBV1-201ENST00000476502 TRIM35Q9UPQ4 493 aa9.7□□□□□ -0.86
TRBV1-201ENST00000476502 PCDHB13Q9Y5F0 798 aa9.69□□□□□ -0.86
TRBV1-201ENST00000476502 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
TRBV1-201ENST00000476502 SLAIN1Q8ND83 568 aa9.66□□□□□ -0.86
TRBV1-201ENST00000476502 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
TRBV1-201ENST00000476502 ST18O60284 1047 aa9.61□□□□□ -0.87
TRBV1-201ENST00000476502 PLCG2P16885 1265 aa9.61□□□□□ -0.87
TRBV1-201ENST00000476502 IFNL1Q8IU54 200 aa9.59□□□□□ -0.87
TRBV1-201ENST00000476502 TMEM106CQ9BVX2 250 aa9.59□□□□□ -0.87
TRBV1-201ENST00000476502 NUBP1P53384 320 aa9.57□□□□□ -0.88
TRBV1-201ENST00000476502 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
TRBV1-201ENST00000476502 TMEM121BQ9BXQ6 578 aaPredicted RBP9.54□□□□□ -0.88
TRBV1-201ENST00000476502 SNPHO15079 494 aa9.52□□□□□ -0.89
TRBV1-201ENST00000476502 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
TRBV1-201ENST00000476502 OCEL1Q9H607 264 aa9.51□□□□□ -0.89
TRBV1-201ENST00000476502 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
TRBV1-201ENST00000476502 MMRN1Q13201 1228 aa9.48□□□□□ -0.89
TRBV1-201ENST00000476502 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
TRBV1-201ENST00000476502 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
TRBV1-201ENST00000476502 PYGBP11216 843 aa9.42□□□□□ -0.9
TRBV1-201ENST00000476502 MARVELD3Q96A59 401 aa9.42□□□□□ -0.9
TRBV1-201ENST00000476502 FKBP8Q14318 412 aa9.39□□□□□ -0.91
TRBV1-201ENST00000476502 C3orf67Q6ZVT6 689 aa9.38□□□□□ -0.91
TRBV1-201ENST00000476502 PCDHB8Q9UN66 801 aa9.37□□□□□ -0.91
TRBV1-201ENST00000476502 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
TRBV1-201ENST00000476502 L3MBTL3Q96JM7 780 aaPredicted RBP9.35□□□□□ -0.91
TRBV1-201ENST00000476502 EMP3P54852 163 aa9.34□□□□□ -0.91
TRBV1-201ENST00000476502 MKRN3Q13064 507 aaKnown RBP9.33□□□□□ -0.92
TRBV1-201ENST00000476502 ZNF467Q7Z7K2 595 aaPredicted RBP9.31□□□□□ -0.92
TRBV1-201ENST00000476502 PDCD7Q8N8D1 485 aaKnown RBP9.31□□□□□ -0.92
TRBV1-201ENST00000476502 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
TRBV1-201ENST00000476502 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
TRBV1-201ENST00000476502 GSE1Q14687 1217 aa9.27□□□□□ -0.93
TRBV1-201ENST00000476502 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
TRBV1-201ENST00000476502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRBV1-201ENST00000476502 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
TRBV1-201ENST00000476502 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
TRBV1-201ENST00000476502 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
TRBV1-201ENST00000476502 POTEB3A0JP26 581 aa9.21□□□□□ -0.94
TRBV1-201ENST00000476502 CHRM1P11229 460 aaPredicted RBP9.21□□□□□ -0.94
TRBV1-201ENST00000476502 PSEN1P49768 467 aa9.21□□□□□ -0.94
TRBV1-201ENST00000476502 POTEBQ6S5H4 581 aa9.21□□□□□ -0.94
TRBV1-201ENST00000476502 G3V3G9 751 aa9.2□□□□□ -0.94
TRBV1-201ENST00000476502 ILDR1Q86SU0 546 aaPredicted RBP9.15□□□□□ -0.94
TRBV1-201ENST00000476502 ZNF710Q8N1W2 664 aa9.15□□□□□ -0.94
TRBV1-201ENST00000476502 PDAP1Q13442 181 aaKnown RBP9.14□□□□□ -0.95
TRBV1-201ENST00000476502 BOLA1Q9Y3E2 137 aa9.14□□□□□ -0.95
TRBV1-201ENST00000476502 VASPP50552 380 aaPredicted RBP9.12□□□□□ -0.95
TRBV1-201ENST00000476502 DPY19L2Q6NUT2 758 aa9.12□□□□□ -0.95
TRBV1-201ENST00000476502 ERBB3P21860 1342 aa9.11□□□□□ -0.95
TRBV1-201ENST00000476502 HOXB3P14651 431 aaPredicted RBP9.11□□□□□ -0.95
TRBV1-201ENST00000476502 HOXB1P14653 301 aaPredicted RBP9.11□□□□□ -0.95
TRBV1-201ENST00000476502 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
TRBV1-201ENST00000476502 CABP2Q9NPB3 220 aa9.1□□□□□ -0.95
TRBV1-201ENST00000476502 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
TRBV1-201ENST00000476502 RNF166Q96A37 237 aaPredicted RBP9.07□□□□□ -0.96
TRBV1-201ENST00000476502 VARS2Q5ST30 1063 aaKnown RBP9.02□□□□□ -0.97
TRBV1-201ENST00000476502 CIZ1Q9ULV3 898 aaPredicted RBP9.02□□□□□ -0.97
TRBV1-201ENST00000476502 MYT1LQ9UL68 1186 aa9.01□□□□□ -0.97
TRBV1-201ENST00000476502 SPOCK2Q92563 424 aa8.99□□□□□ -0.97
TRBV1-201ENST00000476502 ZSWIM6Q9HCJ5 1215 aa8.99□□□□□ -0.97
TRBV1-201ENST00000476502 ZNF687Q8N1G0 1237 aa8.97□□□□□ -0.97
TRBV1-201ENST00000476502 PTGER2P43116 358 aa8.96□□□□□ -0.98
TRBV1-201ENST00000476502 EFCAB3Q8N7B9 438 aa8.94□□□□□ -0.98
TRBV1-201ENST00000476502 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
TRBV1-201ENST00000476502 GPR153Q6NV75 609 aa8.9□□□□□ -0.98
TRBV1-201ENST00000476502 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
TRBV1-201ENST00000476502 TRIM41Q8WV44 630 aa8.89□□□□□ -0.99
TRBV1-201ENST00000476502 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
TRBV1-201ENST00000476502 ANKRD13DQ6ZTN6 518 aa8.87□□□□□ -0.99
TRBV1-201ENST00000476502 SOX12O15370 315 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms