RNA–Protein interactions for RNA: ENST00000476502.1

TRBV1-201, Transcript of T cell receptor beta variable 1 (pseudogene), humanhuman

BASIC

Gene TRBV1, Length 284 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV1-201ENST00000476502 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
TRBV1-201ENST00000476502 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
TRBV1-201ENST00000476502 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
TRBV1-201ENST00000476502 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
TRBV1-201ENST00000476502 FOXD1Q16676 465 aa16.58■□□□□ 0.24
TRBV1-201ENST00000476502 POTEDQ86YR6 584 aa15.9■□□□□ 0.14
TRBV1-201ENST00000476502 MSH5O43196 834 aa15.72■□□□□ 0.11
TRBV1-201ENST00000476502 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
TRBV1-201ENST00000476502 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
TRBV1-201ENST00000476502 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
TRBV1-201ENST00000476502 ADRA2BP18089 450 aa15.15■□□□□ 0.02
TRBV1-201ENST00000476502 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
TRBV1-201ENST00000476502 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
TRBV1-201ENST00000476502 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
TRBV1-201ENST00000476502 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
TRBV1-201ENST00000476502 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
TRBV1-201ENST00000476502 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
TRBV1-201ENST00000476502 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
TRBV1-201ENST00000476502 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
TRBV1-201ENST00000476502 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
TRBV1-201ENST00000476502 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
TRBV1-201ENST00000476502 C1QBPQ07021 282 aaKnown RBP13.17□□□□□ -0.3
TRBV1-201ENST00000476502 DNAJC5BQ9UF47 199 aa13.02□□□□□ -0.33
TRBV1-201ENST00000476502 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
TRBV1-201ENST00000476502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRBV1-201ENST00000476502 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
TRBV1-201ENST00000476502 POTEHQ6S545 545 aa12.42□□□□□ -0.42
TRBV1-201ENST00000476502 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
TRBV1-201ENST00000476502 CAPN15O75808 1086 aa12.4□□□□□ -0.42
TRBV1-201ENST00000476502 DSG3P32926 999 aa12.37□□□□□ -0.43
TRBV1-201ENST00000476502 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
TRBV1-201ENST00000476502 APLP2Q06481 763 aa12.15□□□□□ -0.46
TRBV1-201ENST00000476502 TRHP20396 242 aaPredicted RBP12.1□□□□□ -0.47
TRBV1-201ENST00000476502 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
TRBV1-201ENST00000476502 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
TRBV1-201ENST00000476502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.04□□□□□ -0.48
TRBV1-201ENST00000476502 HNRNPUL2Q1KMD3 747 aaKnown RBP12.04□□□□□ -0.48
TRBV1-201ENST00000476502 ABCB7O75027 752 aa12.03□□□□□ -0.48
TRBV1-201ENST00000476502 KCNA4P22459 653 aa11.98□□□□□ -0.49
TRBV1-201ENST00000476502 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
TRBV1-201ENST00000476502 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
TRBV1-201ENST00000476502 CHRDL2Q6WN34 429 aa11.72□□□□□ -0.53
TRBV1-201ENST00000476502 POLA2Q14181 598 aa11.69□□□□□ -0.54
TRBV1-201ENST00000476502 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
TRBV1-201ENST00000476502 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
TRBV1-201ENST00000476502 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
TRBV1-201ENST00000476502 SP7Q8TDD2 431 aaPredicted RBP11.47□□□□□ -0.57
TRBV1-201ENST00000476502 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
TRBV1-201ENST00000476502 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
TRBV1-201ENST00000476502 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
TRBV1-201ENST00000476502 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
TRBV1-201ENST00000476502 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
TRBV1-201ENST00000476502 HAX1O00165 279 aa11.29□□□□□ -0.6
TRBV1-201ENST00000476502 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
TRBV1-201ENST00000476502 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
TRBV1-201ENST00000476502 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRBV1-201ENST00000476502 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
TRBV1-201ENST00000476502 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
TRBV1-201ENST00000476502 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
TRBV1-201ENST00000476502 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
TRBV1-201ENST00000476502 FBLN2P98095 1184 aa11.03□□□□□ -0.64
TRBV1-201ENST00000476502 EVX2Q03828 476 aa11.02□□□□□ -0.65
TRBV1-201ENST00000476502 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
TRBV1-201ENST00000476502 SPDYE1Q8NFV5 336 aaPredicted RBP10.97□□□□□ -0.65
TRBV1-201ENST00000476502 ZBTB22O15209 634 aa10.96□□□□□ -0.65
TRBV1-201ENST00000476502 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
TRBV1-201ENST00000476502 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
TRBV1-201ENST00000476502 C19orf67A6NJJ6 358 aa10.87□□□□□ -0.67
TRBV1-201ENST00000476502 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
TRBV1-201ENST00000476502 GABBR2O75899 941 aa10.8□□□□□ -0.68
TRBV1-201ENST00000476502 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
TRBV1-201ENST00000476502 LHX8Q68G74 356 aa10.76□□□□□ -0.69
TRBV1-201ENST00000476502 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
TRBV1-201ENST00000476502 CHADLQ6NUI6 762 aa10.74□□□□□ -0.69
TRBV1-201ENST00000476502 PABPN1Q86U42 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRBV1-201ENST00000476502 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
TRBV1-201ENST00000476502 CLCN6P51797 869 aa10.6□□□□□ -0.71
TRBV1-201ENST00000476502 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
TRBV1-201ENST00000476502 POTEIP0CG38 1075 aa10.53□□□□□ -0.72
TRBV1-201ENST00000476502 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
TRBV1-201ENST00000476502 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
TRBV1-201ENST00000476502 CSRNP3Q8WYN3 585 aa10.45□□□□□ -0.74
TRBV1-201ENST00000476502 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
TRBV1-201ENST00000476502 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
TRBV1-201ENST00000476502 PLSCR2Q9NRY7 297 aa10.39□□□□□ -0.75
TRBV1-201ENST00000476502 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
TRBV1-201ENST00000476502 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
TRBV1-201ENST00000476502 PAK3O75914 559 aaPredicted RBP10.3□□□□□ -0.76
TRBV1-201ENST00000476502 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
TRBV1-201ENST00000476502 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
TRBV1-201ENST00000476502 NPM1P06748 294 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRBV1-201ENST00000476502 PHF12Q96QT6 1004 aa10.19□□□□□ -0.78
TRBV1-201ENST00000476502 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
TRBV1-201ENST00000476502 POTEB2H3BUK9 544 aa10.18□□□□□ -0.78
TRBV1-201ENST00000476502 POTEMA6NI47 508 aa10.15□□□□□ -0.78
TRBV1-201ENST00000476502 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
TRBV1-201ENST00000476502 PELP1Q8IZL8 1130 aaKnown RBP10.1□□□□□ -0.79
TRBV1-201ENST00000476502 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
TRBV1-201ENST00000476502 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
TRBV1-201ENST00000476502 C7P10643 843 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms