RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 HAP1P54257 671 aaPredicted RBP6.31□□□□□ -1.4
CCNL1-215ENST00000474539 HMGB2P26583 209 aaKnown RBP6.3□□□□□ -1.4
CCNL1-215ENST00000474539 ZNF326Q5BKZ1 582 aaKnown RBP6.3□□□□□ -1.4
CCNL1-215ENST00000474539 ANP32CO43423 234 aa6.3□□□□□ -1.4
CCNL1-215ENST00000474539 EIF4G2P78344 907 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCNL1-215ENST00000474539 KCNH8Q96L42 1107 aa6.3□□□□□ -1.4
CCNL1-215ENST00000474539 CHMP4AQ9BY43 222 aa6.3□□□□□ -1.4
CCNL1-215ENST00000474539 SMARCA4P51532 1647 aa6.29□□□□□ -1.4
CCNL1-215ENST00000474539 YTHDC1Q96MU7 727 aaKnown RBP6.29□□□□□ -1.4
CCNL1-215ENST00000474539 TNIKQ9UKE5 1360 aa6.28□□□□□ -1.4
CCNL1-215ENST00000474539 FANCD2Q9BXW9 1451 aa6.28□□□□□ -1.4
CCNL1-215ENST00000474539 HMGXB3Q12766 1538 aa6.28□□□□□ -1.4
CCNL1-215ENST00000474539 PNNQ9H307 717 aaKnown RBP6.27□□□□□ -1.4
CCNL1-215ENST00000474539 EIF4G1Q04637 1599 aaKnown RBP6.27□□□□□ -1.41
CCNL1-215ENST00000474539 IFT140Q96RY7 1462 aa6.26□□□□□ -1.41
CCNL1-215ENST00000474539 MRC2Q9UBG0 1479 aa6.25□□□□□ -1.41
CCNL1-215ENST00000474539 ARID3CA6NKF2 412 aa6.25□□□□□ -1.41
CCNL1-215ENST00000474539 EID1Q9Y6B2 187 aa6.25□□□□□ -1.41
CCNL1-215ENST00000474539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.25□□□□□ -1.417e-8■■■□□ 15.2
CCNL1-215ENST00000474539 CANXP27824 592 aaKnown RBP6.25□□□□□ -1.41
CCNL1-215ENST00000474539 CFAP53Q96M91 514 aa6.25□□□□□ -1.41
CCNL1-215ENST00000474539 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
CCNL1-215ENST00000474539 CLSPNQ9HAW4 1339 aa6.24□□□□□ -1.41
CCNL1-215ENST00000474539 NEUROD1Q13562 356 aa6.23□□□□□ -1.41
CCNL1-215ENST00000474539 RAPGEF2Q9Y4G8 1499 aa6.23□□□□□ -1.41
CCNL1-215ENST00000474539 CCDC88BA6NC98 1476 aa6.23□□□□□ -1.41
CCNL1-215ENST00000474539 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.23□□□□□ -1.41
CCNL1-215ENST00000474539 ANO8Q9HCE9 1232 aaPredicted RBP6.22□□□□□ -1.41
CCNL1-215ENST00000474539 CHMP4BQ9H444 224 aaKnown RBP6.22□□□□□ -1.41
CCNL1-215ENST00000474539 MROH2BQ7Z745 1585 aa6.22□□□□□ -1.41
CCNL1-215ENST00000474539 LOC105371045A0A1W2PR82 267 aa6.22□□□□□ -1.41
CCNL1-215ENST00000474539 PTPRGP23470 1445 aa6.21□□□□□ -1.41
CCNL1-215ENST00000474539 PLPPR3Q6T4P5 718 aa6.21□□□□□ -1.41
CCNL1-215ENST00000474539 UACAQ9BZF9 1416 aa6.21□□□□□ -1.42
CCNL1-215ENST00000474539 TIMELESSQ9UNS1 1208 aa6.21□□□□□ -1.42
CCNL1-215ENST00000474539 STAC3Q96MF2 364 aa6.21□□□□□ -1.42
CCNL1-215ENST00000474539 GRIN2BQ13224 1484 aa6.21□□□□□ -1.42
CCNL1-215ENST00000474539 POGZQ7Z3K3 1410 aa6.2□□□□□ -1.42
CCNL1-215ENST00000474539 ANKRD30AQ9BXX3 1397 aa6.2□□□□□ -1.42
CCNL1-215ENST00000474539 JPH4Q96JJ6 628 aa6.2□□□□□ -1.42
CCNL1-215ENST00000474539 LAMC3Q9Y6N6 1575 aa6.2□□□□□ -1.42
CCNL1-215ENST00000474539 SCAF1Q9H7N4 1312 aaKnown RBP6.19□□□□□ -1.42
CCNL1-215ENST00000474539 POGKQ9P215 609 aa6.19□□□□□ -1.42
CCNL1-215ENST00000474539 NUDCQ9Y266 331 aa6.19□□□□□ -1.42
CCNL1-215ENST00000474539 PPARGC1BQ86YN6 1023 aaKnown RBP6.18□□□□□ -1.42
CCNL1-215ENST00000474539 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.18□□□□□ -1.42
CCNL1-215ENST00000474539 EIF3AQ14152 1382 aaKnown RBP6.18□□□□□ -1.42
CCNL1-215ENST00000474539 GAPVD1Q14C86 1478 aa6.18□□□□□ -1.42
CCNL1-215ENST00000474539 WDR43Q15061 677 aaKnown RBP eCLIP6.18□□□□□ -1.42
CCNL1-215ENST00000474539 ARHGAP35Q9NRY4 1499 aa6.17□□□□□ -1.42
CCNL1-215ENST00000474539 ZNF316A6NFI3 1004 aaPredicted RBP6.17□□□□□ -1.42
CCNL1-215ENST00000474539 DCAF8L1A6NGE4 600 aa6.17□□□□□ -1.42
CCNL1-215ENST00000474539 PLEKHH2Q8IVE3 1493 aa6.16□□□□□ -1.42
CCNL1-215ENST00000474539 SPAG9O60271 1321 aaKnown RBP6.16□□□□□ -1.42
CCNL1-215ENST00000474539 TDRD9Q8NDG6 1382 aaKnown RBP6.16□□□□□ -1.42
CCNL1-215ENST00000474539 MYH16Q9H6N6 1097 aa6.15□□□□□ -1.42
CCNL1-215ENST00000474539 TMX4Q9H1E5 349 aaPredicted RBP6.15□□□□□ -1.43
CCNL1-215ENST00000474539 CC2D2AQ9P2K1 1620 aa6.15□□□□□ -1.43
CCNL1-215ENST00000474539 MS4A1P11836 297 aa6.15□□□□□ -1.43
CCNL1-215ENST00000474539 HDAC5Q9UQL6 1122 aa6.15□□□□□ -1.43
CCNL1-215ENST00000474539 SETD5Q9C0A6 1442 aa6.14□□□□□ -1.43
CCNL1-215ENST00000474539 WASHC2AQ641Q2 1341 aa6.14□□□□□ -1.43
CCNL1-215ENST00000474539 CHIC2Q9UKJ5 165 aa6.14□□□□□ -1.43
CCNL1-215ENST00000474539 HDGFL2Q7Z4V5 671 aaPredicted RBP6.13□□□□□ -1.43
CCNL1-215ENST00000474539 CFTRP13569 1480 aa6.13□□□□□ -1.43
CCNL1-215ENST00000474539 CALD1Q05682 793 aaKnown RBP6.12□□□□□ -1.43
CCNL1-215ENST00000474539 SYNJ2O15056 1496 aa6.11□□□□□ -1.43
CCNL1-215ENST00000474539 CFAP44Q96MT7 982 aa6.11□□□□□ -1.43
CCNL1-215ENST00000474539 KNSTRNQ9Y448 316 aa6.11□□□□□ -1.43
CCNL1-215ENST00000474539 HRCP23327 699 aa6.11□□□□□ -1.43
CCNL1-215ENST00000474539 DMRT2Q9Y5R5 561 aa6.11□□□□□ -1.43
CCNL1-215ENST00000474539 CYB5RLQ6IPT4 315 aa6.11□□□□□ -1.43
CCNL1-215ENST00000474539 UPF2Q9HAU5 1272 aaKnown RBP6.11□□□□□ -1.43
CCNL1-215ENST00000474539 VPS8Q8N3P4 1428 aa6.1□□□□□ -1.43
CCNL1-215ENST00000474539 TMF1P82094 1093 aa6.1□□□□□ -1.43
CCNL1-215ENST00000474539 PHLDB1Q86UU1 1377 aa6.1□□□□□ -1.43
CCNL1-215ENST00000474539 MAPK8IP3Q9UPT6 1336 aa6.1□□□□□ -1.43
CCNL1-215ENST00000474539 WASHC2CQ9Y4E1 1318 aa6.1□□□□□ -1.43
CCNL1-215ENST00000474539 FGD5Q6ZNL6 1462 aa6.1□□□□□ -1.43
CCNL1-215ENST00000474539 DNMBPQ6XZF7 1577 aa6.09□□□□□ -1.43
CCNL1-215ENST00000474539 NPHP1O15259 732 aa6.09□□□□□ -1.43
CCNL1-215ENST00000474539 TMC1Q8TDI8 760 aa6.09□□□□□ -1.43
CCNL1-215ENST00000474539 CUX1P39880 1505 aa6.09□□□□□ -1.43
CCNL1-215ENST00000474539 FAM69CQ0P6D2 419 aa6.09□□□□□ -1.43
CCNL1-215ENST00000474539 MAGI1Q96QZ7 1491 aaPredicted RBP6.09□□□□□ -1.44
CCNL1-215ENST00000474539 A0A0G2JS52 829 aa6.09□□□□□ -1.44
CCNL1-215ENST00000474539 GGT6Q6P531 493 aa6.09□□□□□ -1.44
CCNL1-215ENST00000474539 SYNJ1O43426 1573 aa6.08□□□□□ -1.44
CCNL1-215ENST00000474539 VGFO15240 615 aaPredicted RBP6.08□□□□□ -1.44
CCNL1-215ENST00000474539 MYT1Q01538 1121 aa6.08□□□□□ -1.44
CCNL1-215ENST00000474539 PPP6R1Q9UPN7 881 aa6.08□□□□□ -1.44
CCNL1-215ENST00000474539 MLECQ14165 292 aa6.08□□□□□ -1.44
CCNL1-215ENST00000474539 EFCAB5A4FU69 1503 aa6.08□□□□□ -1.44
CCNL1-215ENST00000474539 RRP7BPQ9NSQ0 103 aa6.08□□□□□ -1.44
CCNL1-215ENST00000474539 WIZO95785 1651 aa6.08□□□□□ -1.44
CCNL1-215ENST00000474539 TERF2IPQ9NYB0 399 aa6.07□□□□□ -1.44
CCNL1-215ENST00000474539 DIEXFQ68CQ4 756 aaKnown RBP6.06□□□□□ -1.44
CCNL1-215ENST00000474539 WWC1Q8IX03 1113 aa6.06□□□□□ -1.44
CCNL1-215ENST00000474539 KDM2AQ9Y2K7 1162 aa6.06□□□□□ -1.44
CCNL1-215ENST00000474539 CARD11Q9BXL7 1154 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms