RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
GPCPD1-204ENST00000473797 NUBP1P53384 320 aa13.29□□□□□ -0.28
GPCPD1-204ENST00000473797 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
GPCPD1-204ENST00000473797 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
GPCPD1-204ENST00000473797 LHX8Q68G74 356 aa13.24□□□□□ -0.29
GPCPD1-204ENST00000473797 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
GPCPD1-204ENST00000473797 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
GPCPD1-204ENST00000473797 MAP3K13O43283 966 aa13.16□□□□□ -0.3
GPCPD1-204ENST00000473797 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
GPCPD1-204ENST00000473797 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
GPCPD1-204ENST00000473797 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
GPCPD1-204ENST00000473797 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
GPCPD1-204ENST00000473797 TIE1P35590 1138 aa13.07□□□□□ -0.32
GPCPD1-204ENST00000473797 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
GPCPD1-204ENST00000473797 C7P10643 843 aa13.04□□□□□ -0.32
GPCPD1-204ENST00000473797 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
GPCPD1-204ENST00000473797 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
GPCPD1-204ENST00000473797 SLC39A7Q92504 469 aa13.04□□□□□ -0.32
GPCPD1-204ENST00000473797 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
GPCPD1-204ENST00000473797 ATN1P54259 1190 aaPredicted RBP13.03□□□□□ -0.32
GPCPD1-204ENST00000473797 PCDHB13Q9Y5F0 798 aa13.03□□□□□ -0.32
GPCPD1-204ENST00000473797 POTEB2H3BUK9 544 aa13□□□□□ -0.33
GPCPD1-204ENST00000473797 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
GPCPD1-204ENST00000473797 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
GPCPD1-204ENST00000473797 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
GPCPD1-204ENST00000473797 GSE1Q14687 1217 aa12.98□□□□□ -0.33
GPCPD1-204ENST00000473797 TTLL13PA6NNM8 815 aa12.97□□□□□ -0.33
GPCPD1-204ENST00000473797 PYGBP11216 843 aa12.93□□□□□ -0.34
GPCPD1-204ENST00000473797 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
GPCPD1-204ENST00000473797 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
GPCPD1-204ENST00000473797 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
GPCPD1-204ENST00000473797 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
GPCPD1-204ENST00000473797 IER5LQ5T953 404 aa12.87□□□□□ -0.35
GPCPD1-204ENST00000473797 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
GPCPD1-204ENST00000473797 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
GPCPD1-204ENST00000473797 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
GPCPD1-204ENST00000473797 ZNF467Q7Z7K2 595 aaPredicted RBP12.82□□□□□ -0.36
GPCPD1-204ENST00000473797 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
GPCPD1-204ENST00000473797 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
GPCPD1-204ENST00000473797 COLQQ9Y215 455 aaPredicted RBP12.79□□□□□ -0.36
GPCPD1-204ENST00000473797 SEC24BO95487 1268 aa12.75□□□□□ -0.37
GPCPD1-204ENST00000473797 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
GPCPD1-204ENST00000473797 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
GPCPD1-204ENST00000473797 TRIM41Q8WV44 630 aa12.71□□□□□ -0.37
GPCPD1-204ENST00000473797 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
GPCPD1-204ENST00000473797 PSEN1P49768 467 aa12.67□□□□□ -0.38
GPCPD1-204ENST00000473797 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
GPCPD1-204ENST00000473797 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
GPCPD1-204ENST00000473797 PLCG2P16885 1265 aa12.64□□□□□ -0.39
GPCPD1-204ENST00000473797 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
GPCPD1-204ENST00000473797 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
GPCPD1-204ENST00000473797 PDCD7Q8N8D1 485 aaKnown RBP12.56□□□□□ -0.4
GPCPD1-204ENST00000473797 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
GPCPD1-204ENST00000473797 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
GPCPD1-204ENST00000473797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.41
GPCPD1-204ENST00000473797 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
GPCPD1-204ENST00000473797 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
GPCPD1-204ENST00000473797 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
GPCPD1-204ENST00000473797 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
GPCPD1-204ENST00000473797 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
GPCPD1-204ENST00000473797 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
GPCPD1-204ENST00000473797 POTEMA6NI47 508 aa12.42□□□□□ -0.42
GPCPD1-204ENST00000473797 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
GPCPD1-204ENST00000473797 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
GPCPD1-204ENST00000473797 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
GPCPD1-204ENST00000473797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.38□□□□□ -0.43
GPCPD1-204ENST00000473797 EFCAB3Q8N7B9 438 aa12.38□□□□□ -0.43
GPCPD1-204ENST00000473797 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
GPCPD1-204ENST00000473797 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
GPCPD1-204ENST00000473797 PKD2Q13563 968 aa12.36□□□□□ -0.43
GPCPD1-204ENST00000473797 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
GPCPD1-204ENST00000473797 SOX12O15370 315 aa12.34□□□□□ -0.43
GPCPD1-204ENST00000473797 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
GPCPD1-204ENST00000473797 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
GPCPD1-204ENST00000473797 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
GPCPD1-204ENST00000473797 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
GPCPD1-204ENST00000473797 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
GPCPD1-204ENST00000473797 SNPHO15079 494 aa12.3□□□□□ -0.44
GPCPD1-204ENST00000473797 ST18O60284 1047 aa12.28□□□□□ -0.44
GPCPD1-204ENST00000473797 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
GPCPD1-204ENST00000473797 G3V3G9 751 aa12.24□□□□□ -0.45
GPCPD1-204ENST00000473797 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
GPCPD1-204ENST00000473797 RGL2O15211 777 aa12.23□□□□□ -0.45
GPCPD1-204ENST00000473797 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
GPCPD1-204ENST00000473797 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
GPCPD1-204ENST00000473797 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
GPCPD1-204ENST00000473797 STK25O00506 426 aa12.18□□□□□ -0.46
GPCPD1-204ENST00000473797 NLRP6P59044 892 aa12.18□□□□□ -0.46
GPCPD1-204ENST00000473797 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
GPCPD1-204ENST00000473797 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
GPCPD1-204ENST00000473797 HOXB3P14651 431 aaPredicted RBP12.11□□□□□ -0.47
GPCPD1-204ENST00000473797 TMEM92Q6UXU6 159 aa12.1□□□□□ -0.47
GPCPD1-204ENST00000473797 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
GPCPD1-204ENST00000473797 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
GPCPD1-204ENST00000473797 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
GPCPD1-204ENST00000473797 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
GPCPD1-204ENST00000473797 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
GPCPD1-204ENST00000473797 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
GPCPD1-204ENST00000473797 EMP3P54852 163 aa11.99□□□□□ -0.49
GPCPD1-204ENST00000473797 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms