RNA–Protein interactions for RNA: ENST00000473118.5

TARDBP-205, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-205ENST00000473118 POTEHQ6S545 545 aa14.34□□□□□ -0.11
TARDBP-205ENST00000473118 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
TARDBP-205ENST00000473118 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
TARDBP-205ENST00000473118 WIZO95785 1651 aa14.3□□□□□ -0.12
TARDBP-205ENST00000473118 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
TARDBP-205ENST00000473118 HMGXB3Q12766 1538 aa14.26□□□□□ -0.13
TARDBP-205ENST00000473118 NCAPD3P42695 1498 aa14.26□□□□□ -0.13
TARDBP-205ENST00000473118 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
TARDBP-205ENST00000473118 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
TARDBP-205ENST00000473118 ZBTB47Q9UFB7 747 aaPredicted RBP14.22□□□□□ -0.13
TARDBP-205ENST00000473118 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
TARDBP-205ENST00000473118 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
TARDBP-205ENST00000473118 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
TARDBP-205ENST00000473118 HAX1O00165 279 aa14.13□□□□□ -0.15
TARDBP-205ENST00000473118 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
TARDBP-205ENST00000473118 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
TARDBP-205ENST00000473118 SPOCK2Q92563 424 aa14.03□□□□□ -0.16
TARDBP-205ENST00000473118 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
TARDBP-205ENST00000473118 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.17
TARDBP-205ENST00000473118 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
TARDBP-205ENST00000473118 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
TARDBP-205ENST00000473118 NUBP1P53384 320 aa13.95□□□□□ -0.18
TARDBP-205ENST00000473118 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
TARDBP-205ENST00000473118 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
TARDBP-205ENST00000473118 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
TARDBP-205ENST00000473118 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
TARDBP-205ENST00000473118 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
TARDBP-205ENST00000473118 SUPT5HO00267 1087 aaKnown RBP13.92□□□□□ -0.18
TARDBP-205ENST00000473118 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
TARDBP-205ENST00000473118 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
TARDBP-205ENST00000473118 EVX2Q03828 476 aa13.88□□□□□ -0.19
TARDBP-205ENST00000473118 LAMC3Q9Y6N6 1575 aa13.87□□□□□ -0.19
TARDBP-205ENST00000473118 GSE1Q14687 1217 aa13.85□□□□□ -0.19
TARDBP-205ENST00000473118 CFTRP13569 1480 aa13.82□□□□□ -0.2
TARDBP-205ENST00000473118 NESP48681 1621 aa13.8□□□□□ -0.2
TARDBP-205ENST00000473118 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
TARDBP-205ENST00000473118 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
TARDBP-205ENST00000473118 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
TARDBP-205ENST00000473118 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
TARDBP-205ENST00000473118 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-205ENST00000473118 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
TARDBP-205ENST00000473118 PYGBP11216 843 aa13.73□□□□□ -0.21
TARDBP-205ENST00000473118 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
TARDBP-205ENST00000473118 CLCN6P51797 869 aa13.66□□□□□ -0.22
TARDBP-205ENST00000473118 MAP3K13O43283 966 aa13.65□□□□□ -0.22
TARDBP-205ENST00000473118 GABBR2O75899 941 aa13.65□□□□□ -0.22
TARDBP-205ENST00000473118 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
TARDBP-205ENST00000473118 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
TARDBP-205ENST00000473118 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
TARDBP-205ENST00000473118 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
TARDBP-205ENST00000473118 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
TARDBP-205ENST00000473118 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-205ENST00000473118 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
TARDBP-205ENST00000473118 CHRM1P11229 460 aaPredicted RBP13.59□□□□□ -0.23
TARDBP-205ENST00000473118 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
TARDBP-205ENST00000473118 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
TARDBP-205ENST00000473118 PKD2Q13563 968 aa13.58□□□□□ -0.24
TARDBP-205ENST00000473118 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
TARDBP-205ENST00000473118 WDR62O43379 1518 aa13.56□□□□□ -0.24
TARDBP-205ENST00000473118 SGIP1Q9BQI5 828 aa13.56□□□□□ -0.24
TARDBP-205ENST00000473118 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
TARDBP-205ENST00000473118 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
TARDBP-205ENST00000473118 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
TARDBP-205ENST00000473118 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
TARDBP-205ENST00000473118 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
TARDBP-205ENST00000473118 DNMBPQ6XZF7 1577 aa13.53□□□□□ -0.24
TARDBP-205ENST00000473118 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
TARDBP-205ENST00000473118 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
TARDBP-205ENST00000473118 CUX1P39880 1505 aa13.51□□□□□ -0.25
TARDBP-205ENST00000473118 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
TARDBP-205ENST00000473118 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
TARDBP-205ENST00000473118 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
TARDBP-205ENST00000473118 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
TARDBP-205ENST00000473118 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
TARDBP-205ENST00000473118 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
TARDBP-205ENST00000473118 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
TARDBP-205ENST00000473118 CUX2O14529 1486 aa13.44□□□□□ -0.26
TARDBP-205ENST00000473118 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.266e-7■□□□□ 11.3
TARDBP-205ENST00000473118 RGL2O15211 777 aa13.43□□□□□ -0.26
TARDBP-205ENST00000473118 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
TARDBP-205ENST00000473118 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
TARDBP-205ENST00000473118 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
TARDBP-205ENST00000473118 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-205ENST00000473118 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
TARDBP-205ENST00000473118 TIE1P35590 1138 aa13.39□□□□□ -0.27
TARDBP-205ENST00000473118 PSEN1P49768 467 aa13.39□□□□□ -0.27
TARDBP-205ENST00000473118 PDAP1Q13442 181 aaKnown RBP13.39□□□□□ -0.27
TARDBP-205ENST00000473118 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
TARDBP-205ENST00000473118 POLA1P09884 1462 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-205ENST00000473118 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
TARDBP-205ENST00000473118 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-205ENST00000473118 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-205ENST00000473118 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
TARDBP-205ENST00000473118 ATMINO43313 823 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-205ENST00000473118 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
TARDBP-205ENST00000473118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-205ENST00000473118 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-205ENST00000473118 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
TARDBP-205ENST00000473118 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-205ENST00000473118 ABCA10Q8WWZ4 1543 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms