RNA–Protein interactions for RNA: ENST00000473118.5

TARDBP-205, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-205ENST00000473118 DDX3XO00571 662 aaKnown RBP eCLIP8.19□□□□□ -1.11e-28■■■■■ 35.7
TARDBP-205ENST00000473118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.45□□□□□ -1.061e-28■■■■■ 32.6
TARDBP-205ENST00000473118 ZNF622Q969S3 477 aaKnown RBP eCLIP9.62□□□□□ -0.873e-23■□□□□ 9.1
TARDBP-205ENST00000473118 NCBP2P52298 156 aaKnown RBP eCLIP7.2□□□□□ -1.261e-12■■■□□ 17.9
TARDBP-205ENST00000473118 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.37□□□□□ -0.912e-12■□□□□ 8.7
TARDBP-205ENST00000473118 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.47□□□□□ -1.051e-11■■□□□ 11.7
TARDBP-205ENST00000473118 U2AF2P26368 475 aaKnown RBP eCLIP8.9□□□□□ -0.984e-10■■□□□ 12.2
TARDBP-205ENST00000473118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.342e-9■■□□□ 13.8
TARDBP-205ENST00000473118 G3BP1Q13283 466 aaKnown RBP eCLIP9.58□□□□□ -0.885e-9■□□□□ 10.1
TARDBP-205ENST00000473118 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.52□□□□□ -1.375e-9■■■■■ 33.2
TARDBP-205ENST00000473118 SMNDC1O75940 238 aaKnown RBP eCLIP8.86□□□□□ -0.992e-8■■■■■ 29.2
TARDBP-205ENST00000473118 RPS3P23396 243 aaKnown RBP eCLIP7.65□□□□□ -1.183e-8■□□□□ 11
TARDBP-205ENST00000473118 SRSF1Q07955 248 aaKnown RBP eCLIP6.87□□□□□ -1.315e-8■□□□□ 11.2
TARDBP-205ENST00000473118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.451e-7■■■■■ 34.9
TARDBP-205ENST00000473118 DDX6P26196 483 aaKnown RBP eCLIP8.11□□□□□ -1.111e-7■■■■□ 26.6
TARDBP-205ENST00000473118 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■□□□ 11.5
TARDBP-205ENST00000473118 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■□□□ 14.3
TARDBP-205ENST00000473118 RBM22Q9NW64 420 aaKnown RBP eCLIP7.85□□□□□ -1.152e-7■■■■■ 31.6
TARDBP-205ENST00000473118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.37□□□□□ -0.912e-7■■■■□ 23.7
TARDBP-205ENST00000473118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.09□□□□□ -0.314e-7■■□□□ 12.3
TARDBP-205ENST00000473118 SF3B4Q15427 424 aaKnown RBP eCLIP6.89□□□□□ -1.314e-7■□□□□ 10.3
TARDBP-205ENST00000473118 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.266e-7■□□□□ 11.3
TARDBP-205ENST00000473118 PPIGQ13427 754 aaKnown RBP eCLIP8.48□□□□□ -1.056e-7■□□□□ 8.8
TARDBP-205ENST00000473118 HNRNPMP52272 730 aaKnown RBP eCLIP11.91□□□□□ -0.57e-7■■□□□ 12.4
TARDBP-205ENST00000473118 RBM15Q96T37 977 aaKnown RBP eCLIP7.81□□□□□ -1.169e-7■■■□□ 18.3
TARDBP-205ENST00000473118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.03□□□□□ -0.481e-6■■■□□ 15.4
TARDBP-205ENST00000473118 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■□□□□ 9.5
TARDBP-205ENST00000473118 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.81□□□□□ -0.843e-6■■■■□ 21.6
Retrieved 28 of 28 RNA–protein pairs in 5.9 ms