RNA–Protein interactions for RNA: ENST00000472420.5

LRPPRC-208, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-208ENST00000472420 GRIN2BQ13224 1484 aa14.45□□□□□ -0.1
LRPPRC-208ENST00000472420 TSPOAP1O95153 1857 aa14.45□□□□□ -0.1
LRPPRC-208ENST00000472420 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
LRPPRC-208ENST00000472420 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
LRPPRC-208ENST00000472420 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
LRPPRC-208ENST00000472420 SOGA1O94964 1423 aa14.41□□□□□ -0.1
LRPPRC-208ENST00000472420 SHROOM2Q13796 1616 aa14.36□□□□□ -0.11
LRPPRC-208ENST00000472420 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
LRPPRC-208ENST00000472420 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
LRPPRC-208ENST00000472420 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
LRPPRC-208ENST00000472420 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
LRPPRC-208ENST00000472420 GRIN2AQ12879 1464 aa14.27□□□□□ -0.12
LRPPRC-208ENST00000472420 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
LRPPRC-208ENST00000472420 NUP160Q12769 1436 aa14.26□□□□□ -0.13
LRPPRC-208ENST00000472420 CCDC88BA6NC98 1476 aa14.24□□□□□ -0.13
LRPPRC-208ENST00000472420 PPRC1Q5VV67 1664 aaKnown RBP14.23□□□□□ -0.13
LRPPRC-208ENST00000472420 ADCY10Q96PN6 1610 aa14.23□□□□□ -0.13
LRPPRC-208ENST00000472420 PRG4Q92954 1404 aaPredicted RBP14.2□□□□□ -0.14
LRPPRC-208ENST00000472420 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
LRPPRC-208ENST00000472420 CERKQ8TCT0 537 aa14.18□□□□□ -0.14
LRPPRC-208ENST00000472420 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
LRPPRC-208ENST00000472420 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
LRPPRC-208ENST00000472420 PCF11O94913 1555 aaKnown RBP14.11□□□□□ -0.15
LRPPRC-208ENST00000472420 GLI2P10070 1586 aa14.11□□□□□ -0.15
LRPPRC-208ENST00000472420 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
LRPPRC-208ENST00000472420 CUX1P39880 1505 aa14.06□□□□□ -0.16
LRPPRC-208ENST00000472420 PTPRMP28827 1452 aa14.05□□□□□ -0.16
LRPPRC-208ENST00000472420 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
LRPPRC-208ENST00000472420 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
LRPPRC-208ENST00000472420 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
LRPPRC-208ENST00000472420 KIF21BO75037 1637 aa14.01□□□□□ -0.17
LRPPRC-208ENST00000472420 PLB1Q6P1J6 1458 aa14□□□□□ -0.17
LRPPRC-208ENST00000472420 MAP3K4Q9Y6R4 1608 aa14□□□□□ -0.17
LRPPRC-208ENST00000472420 ASXL2Q76L83 1435 aa13.98□□□□□ -0.17
LRPPRC-208ENST00000472420 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
LRPPRC-208ENST00000472420 ADAMTSL3P82987 1691 aa13.98□□□□□ -0.17
LRPPRC-208ENST00000472420 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
LRPPRC-208ENST00000472420 ABCC2Q92887 1545 aa13.93□□□□□ -0.18
LRPPRC-208ENST00000472420 KIAA0586Q9BVV6 1533 aa13.92□□□□□ -0.18
LRPPRC-208ENST00000472420 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.18
LRPPRC-208ENST00000472420 HSPA2P54652 639 aa13.9□□□□□ -0.18
LRPPRC-208ENST00000472420 CUL7Q14999 1698 aa13.88□□□□□ -0.19
LRPPRC-208ENST00000472420 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
LRPPRC-208ENST00000472420 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
LRPPRC-208ENST00000472420 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
LRPPRC-208ENST00000472420 PTPRGP23470 1445 aa13.82□□□□□ -0.2
LRPPRC-208ENST00000472420 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
LRPPRC-208ENST00000472420 UHRF1BP1LA0JNW5 1464 aa13.78□□□□□ -0.2
LRPPRC-208ENST00000472420 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
LRPPRC-208ENST00000472420 MAGI3Q5TCQ9 1506 aa13.76□□□□□ -0.21
LRPPRC-208ENST00000472420 WRNQ14191 1432 aaPredicted RBP eCLIP13.75□□□□□ -0.21
LRPPRC-208ENST00000472420 IQSEC2Q5JU85 1478 aa13.74□□□□□ -0.21
LRPPRC-208ENST00000472420 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
LRPPRC-208ENST00000472420 KDM5BQ9UGL1 1544 aa13.72□□□□□ -0.21
LRPPRC-208ENST00000472420 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
LRPPRC-208ENST00000472420 MED1Q15648 1581 aaPredicted RBP13.71□□□□□ -0.21
LRPPRC-208ENST00000472420 DMRT2Q9Y5R5 561 aa13.71□□□□□ -0.21
LRPPRC-208ENST00000472420 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
LRPPRC-208ENST00000472420 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
LRPPRC-208ENST00000472420 ZCCHC11Q5TAX3 1644 aaKnown RBP13.69□□□□□ -0.22
LRPPRC-208ENST00000472420 UACAQ9BZF9 1416 aa13.69□□□□□ -0.22
LRPPRC-208ENST00000472420 YEATS2Q9ULM3 1422 aa13.69□□□□□ -0.22
LRPPRC-208ENST00000472420 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
LRPPRC-208ENST00000472420 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
LRPPRC-208ENST00000472420 WDR7Q9Y4E6 1490 aa13.67□□□□□ -0.22
LRPPRC-208ENST00000472420 ARID4BQ4LE39 1312 aaPredicted RBP13.66□□□□□ -0.22
LRPPRC-208ENST00000472420 LTBP4Q8N2S1 1624 aa13.64□□□□□ -0.23
LRPPRC-208ENST00000472420 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
LRPPRC-208ENST00000472420 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
LRPPRC-208ENST00000472420 PREX1Q8TCU6 1659 aa13.61□□□□□ -0.23
LRPPRC-208ENST00000472420 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
LRPPRC-208ENST00000472420 PTPRTO14522 1441 aa13.59□□□□□ -0.23
LRPPRC-208ENST00000472420 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
LRPPRC-208ENST00000472420 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
LRPPRC-208ENST00000472420 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
LRPPRC-208ENST00000472420 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
LRPPRC-208ENST00000472420 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
LRPPRC-208ENST00000472420 POGZQ7Z3K3 1410 aa13.52□□□□□ -0.25
LRPPRC-208ENST00000472420 ARHGEF40Q8TER5 1519 aa13.52□□□□□ -0.25
LRPPRC-208ENST00000472420 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
LRPPRC-208ENST00000472420 RAPGEF3O95398 923 aa13.51□□□□□ -0.25
LRPPRC-208ENST00000472420 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
LRPPRC-208ENST00000472420 FRMPD1Q5SYB0 1578 aa13.5□□□□□ -0.25
LRPPRC-208ENST00000472420 FANCAO15360 1455 aa13.48□□□□□ -0.25
LRPPRC-208ENST00000472420 HSPA1LP34931 641 aa13.47□□□□□ -0.25
LRPPRC-208ENST00000472420 DISP1Q96F81 1524 aa13.46□□□□□ -0.25
LRPPRC-208ENST00000472420 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
LRPPRC-208ENST00000472420 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
LRPPRC-208ENST00000472420 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
LRPPRC-208ENST00000472420 NEO1Q92859 1461 aa13.42□□□□□ -0.26
LRPPRC-208ENST00000472420 SIGLEC1Q9BZZ2 1709 aa13.42□□□□□ -0.26
LRPPRC-208ENST00000472420 KCNA4P22459 653 aa13.41□□□□□ -0.26
LRPPRC-208ENST00000472420 AKNAQ7Z591 1439 aa13.39□□□□□ -0.27
LRPPRC-208ENST00000472420 ABCA9Q8IUA7 1624 aa13.38□□□□□ -0.27
LRPPRC-208ENST00000472420 MLECQ14165 292 aa13.37□□□□□ -0.27
LRPPRC-208ENST00000472420 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
LRPPRC-208ENST00000472420 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
LRPPRC-208ENST00000472420 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
LRPPRC-208ENST00000472420 IGF1RP08069 1367 aa13.35□□□□□ -0.27
LRPPRC-208ENST00000472420 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms