RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
SMC4-213ENST00000472282 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
SMC4-213ENST00000472282 CHD1O14646 1710 aa16.42■□□□□ 0.22
SMC4-213ENST00000472282 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
SMC4-213ENST00000472282 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.222e-8■■■■■ 155.3
SMC4-213ENST00000472282 CUX1P39880 1505 aa16.4■□□□□ 0.22
SMC4-213ENST00000472282 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
SMC4-213ENST00000472282 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
SMC4-213ENST00000472282 SP7Q8TDD2 431 aaPredicted RBP16.37■□□□□ 0.21
SMC4-213ENST00000472282 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
SMC4-213ENST00000472282 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
SMC4-213ENST00000472282 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
SMC4-213ENST00000472282 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
SMC4-213ENST00000472282 SOGA1O94964 1423 aa16.33■□□□□ 0.2
SMC4-213ENST00000472282 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
SMC4-213ENST00000472282 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
SMC4-213ENST00000472282 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
SMC4-213ENST00000472282 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
SMC4-213ENST00000472282 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
SMC4-213ENST00000472282 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
SMC4-213ENST00000472282 ZBTB22O15209 634 aa16.24■□□□□ 0.19
SMC4-213ENST00000472282 ABCA5Q8WWZ7 1642 aa16.2■□□□□ 0.18
SMC4-213ENST00000472282 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
SMC4-213ENST00000472282 FBLN2P98095 1184 aa16.2■□□□□ 0.18
SMC4-213ENST00000472282 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
SMC4-213ENST00000472282 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
SMC4-213ENST00000472282 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
SMC4-213ENST00000472282 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
SMC4-213ENST00000472282 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
SMC4-213ENST00000472282 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
SMC4-213ENST00000472282 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
SMC4-213ENST00000472282 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
SMC4-213ENST00000472282 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
SMC4-213ENST00000472282 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
SMC4-213ENST00000472282 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
SMC4-213ENST00000472282 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
SMC4-213ENST00000472282 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
SMC4-213ENST00000472282 ADAMTS12P58397 1594 aa16.05■□□□□ 0.16
SMC4-213ENST00000472282 AKT1S1Q96B36 256 aa16.02■□□□□ 0.16
SMC4-213ENST00000472282 GRIN2AQ12879 1464 aa16■□□□□ 0.15
SMC4-213ENST00000472282 CEP170Q5SW79 1584 aa16■□□□□ 0.15
SMC4-213ENST00000472282 PIP4P2Q8N4L2 257 aa15.97■□□□□ 0.15
SMC4-213ENST00000472282 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
SMC4-213ENST00000472282 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
SMC4-213ENST00000472282 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
SMC4-213ENST00000472282 NUP160Q12769 1436 aa15.93■□□□□ 0.14
SMC4-213ENST00000472282 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
SMC4-213ENST00000472282 HAX1O00165 279 aa15.87■□□□□ 0.13
SMC4-213ENST00000472282 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
SMC4-213ENST00000472282 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
SMC4-213ENST00000472282 CUL7Q14999 1698 aa15.79■□□□□ 0.12
SMC4-213ENST00000472282 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
SMC4-213ENST00000472282 IGF1RP08069 1367 aa15.76■□□□□ 0.11
SMC4-213ENST00000472282 EVX2Q03828 476 aa15.76■□□□□ 0.11
SMC4-213ENST00000472282 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
SMC4-213ENST00000472282 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
SMC4-213ENST00000472282 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
SMC4-213ENST00000472282 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
SMC4-213ENST00000472282 FXR2P51116 673 aaKnown RBP eCLIP15.72■□□□□ 0.112e-10■■■■■ 37.2
SMC4-213ENST00000472282 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
SMC4-213ENST00000472282 KIF13AQ9H1H9 1805 aa15.69■□□□□ 0.1
SMC4-213ENST00000472282 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
SMC4-213ENST00000472282 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
SMC4-213ENST00000472282 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
SMC4-213ENST00000472282 ADCY10Q96PN6 1610 aa15.64■□□□□ 0.09
SMC4-213ENST00000472282 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
SMC4-213ENST00000472282 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
SMC4-213ENST00000472282 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
SMC4-213ENST00000472282 CTTNBP2Q8WZ74 1663 aa15.54■□□□□ 0.08
SMC4-213ENST00000472282 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
SMC4-213ENST00000472282 MAPKBP1O60336 1514 aa15.53■□□□□ 0.08
SMC4-213ENST00000472282 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
SMC4-213ENST00000472282 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
SMC4-213ENST00000472282 DISP1Q96F81 1524 aa15.51■□□□□ 0.07
SMC4-213ENST00000472282 TTBK1Q5TCY1 1321 aaPredicted RBP15.49■□□□□ 0.07
SMC4-213ENST00000472282 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
SMC4-213ENST00000472282 PTPRGP23470 1445 aa15.49■□□□□ 0.07
SMC4-213ENST00000472282 UGGT2Q9NYU1 1516 aa15.48■□□□□ 0.07
SMC4-213ENST00000472282 TSPOAP1O95153 1857 aa15.48■□□□□ 0.07
SMC4-213ENST00000472282 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
SMC4-213ENST00000472282 CARMIL2Q6F5E8 1435 aa15.47■□□□□ 0.07
SMC4-213ENST00000472282 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
SMC4-213ENST00000472282 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
SMC4-213ENST00000472282 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMC4-213ENST00000472282 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
SMC4-213ENST00000472282 FAM69CQ0P6D2 419 aa15.43■□□□□ 0.06
SMC4-213ENST00000472282 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
SMC4-213ENST00000472282 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
SMC4-213ENST00000472282 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
SMC4-213ENST00000472282 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
SMC4-213ENST00000472282 ZCCHC11Q5TAX3 1644 aaKnown RBP15.39■□□□□ 0.05
SMC4-213ENST00000472282 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
SMC4-213ENST00000472282 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
SMC4-213ENST00000472282 UACAQ9BZF9 1416 aa15.39■□□□□ 0.05
SMC4-213ENST00000472282 ASXL2Q76L83 1435 aa15.36■□□□□ 0.05
SMC4-213ENST00000472282 KDM5BQ9UGL1 1544 aa15.35■□□□□ 0.05
SMC4-213ENST00000472282 LHX8Q68G74 356 aa15.35■□□□□ 0.05
SMC4-213ENST00000472282 KDM6BO15054 1643 aa15.34■□□□□ 0.05
SMC4-213ENST00000472282 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.05
SMC4-213ENST00000472282 GLI2P10070 1586 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms