RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 THOC2Q8NI27 1593 aaKnown RBP9.78□□□□□ -0.84
HDAC8-216ENST00000470998 PITPNM1O00562 1244 aa9.77□□□□□ -0.85
HDAC8-216ENST00000470998 CHRDL2Q6WN34 429 aa9.75□□□□□ -0.85
HDAC8-216ENST00000470998 MRC2Q9UBG0 1479 aa9.74□□□□□ -0.85
HDAC8-216ENST00000470998 TOP2AP11388 1531 aaKnown RBP9.74□□□□□ -0.85
HDAC8-216ENST00000470998 CFTRP13569 1480 aa9.73□□□□□ -0.85
HDAC8-216ENST00000470998 PROM2Q8N271 834 aa9.73□□□□□ -0.85
HDAC8-216ENST00000470998 PRR29P0C7W0 189 aa9.71□□□□□ -0.86
HDAC8-216ENST00000470998 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
HDAC8-216ENST00000470998 WDR62O43379 1518 aa9.71□□□□□ -0.86
HDAC8-216ENST00000470998 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.86
HDAC8-216ENST00000470998 FANCD2Q9BXW9 1451 aa9.7□□□□□ -0.86
HDAC8-216ENST00000470998 FBXO3Q9UK99 471 aa9.69□□□□□ -0.86
HDAC8-216ENST00000470998 SUPT5HO00267 1087 aaKnown RBP9.65□□□□□ -0.86
HDAC8-216ENST00000470998 CCDC88BA6NC98 1476 aa9.62□□□□□ -0.87
HDAC8-216ENST00000470998 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
HDAC8-216ENST00000470998 URB2Q14146 1524 aaKnown RBP9.59□□□□□ -0.87
HDAC8-216ENST00000470998 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
HDAC8-216ENST00000470998 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
HDAC8-216ENST00000470998 ABCC8Q09428 1581 aa9.57□□□□□ -0.88
HDAC8-216ENST00000470998 PRKAR2AP13861 404 aaKnown RBP9.56□□□□□ -0.88
HDAC8-216ENST00000470998 PLCD3Q8N3E9 789 aa9.56□□□□□ -0.88
HDAC8-216ENST00000470998 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
HDAC8-216ENST00000470998 MIER1Q8N108 512 aa9.54□□□□□ -0.88
HDAC8-216ENST00000470998 PRDM2Q13029 1718 aa9.53□□□□□ -0.88
HDAC8-216ENST00000470998 CHADLQ6NUI6 762 aa9.52□□□□□ -0.89
HDAC8-216ENST00000470998 POTEHQ6S545 545 aa9.52□□□□□ -0.89
HDAC8-216ENST00000470998 TOPBP1Q92547 1522 aa9.51□□□□□ -0.89
HDAC8-216ENST00000470998 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
HDAC8-216ENST00000470998 DNMBPQ6XZF7 1577 aa9.48□□□□□ -0.89
HDAC8-216ENST00000470998 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
HDAC8-216ENST00000470998 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
HDAC8-216ENST00000470998 ZNF608Q9ULD9 1512 aaPredicted RBP9.45□□□□□ -0.9
HDAC8-216ENST00000470998 NPM1P06748 294 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDAC8-216ENST00000470998 KLHL34Q8N239 644 aa9.43□□□□□ -0.9
HDAC8-216ENST00000470998 FARP1Q9Y4F1 1045 aaPredicted RBP9.43□□□□□ -0.9
HDAC8-216ENST00000470998 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
HDAC8-216ENST00000470998 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
HDAC8-216ENST00000470998 SOGA1O94964 1423 aa9.4□□□□□ -0.9
HDAC8-216ENST00000470998 WDR97A6NE52 1622 aa9.39□□□□□ -0.91
HDAC8-216ENST00000470998 TARBP1Q13395 1621 aaKnown RBP9.39□□□□□ -0.91
HDAC8-216ENST00000470998 EIF4G3O43432 1585 aaKnown RBP9.39□□□□□ -0.91
HDAC8-216ENST00000470998 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC8-216ENST00000470998 HAX1O00165 279 aa9.37□□□□□ -0.91
HDAC8-216ENST00000470998 FGD5Q6ZNL6 1462 aa9.36□□□□□ -0.91
HDAC8-216ENST00000470998 RAD54L2Q9Y4B4 1467 aa9.36□□□□□ -0.91
HDAC8-216ENST00000470998 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
HDAC8-216ENST00000470998 TDRD9Q8NDG6 1382 aaKnown RBP9.35□□□□□ -0.91
HDAC8-216ENST00000470998 CUX1P39880 1505 aa9.34□□□□□ -0.91
HDAC8-216ENST00000470998 GRIN2BQ13224 1484 aa9.33□□□□□ -0.92
HDAC8-216ENST00000470998 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
HDAC8-216ENST00000470998 ARHGEF11O15085 1522 aa9.32□□□□□ -0.92
HDAC8-216ENST00000470998 CHMP7Q8WUX9 453 aaPredicted RBP9.32□□□□□ -0.92
HDAC8-216ENST00000470998 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
HDAC8-216ENST00000470998 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
HDAC8-216ENST00000470998 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
HDAC8-216ENST00000470998 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
HDAC8-216ENST00000470998 SNAPC4Q5SXM2 1469 aa9.31□□□□□ -0.92
HDAC8-216ENST00000470998 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
HDAC8-216ENST00000470998 IFNLR1Q8IU57 520 aaPredicted RBP9.3□□□□□ -0.92
HDAC8-216ENST00000470998 SPOCK2Q92563 424 aa9.29□□□□□ -0.92
HDAC8-216ENST00000470998 ABCA10Q8WWZ4 1543 aa9.29□□□□□ -0.92
HDAC8-216ENST00000470998 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
HDAC8-216ENST00000470998 GAPVD1Q14C86 1478 aa9.28□□□□□ -0.92
HDAC8-216ENST00000470998 WRNQ14191 1432 aaPredicted RBP eCLIP9.28□□□□□ -0.92
HDAC8-216ENST00000470998 FAM212AQ96EL1 285 aa9.27□□□□□ -0.93
HDAC8-216ENST00000470998 CHD1O14646 1710 aa9.26□□□□□ -0.93
HDAC8-216ENST00000470998 SYNJ1O43426 1573 aa9.26□□□□□ -0.93
HDAC8-216ENST00000470998 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
HDAC8-216ENST00000470998 C19orf67A6NJJ6 358 aa9.25□□□□□ -0.93
HDAC8-216ENST00000470998 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
HDAC8-216ENST00000470998 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
HDAC8-216ENST00000470998 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
HDAC8-216ENST00000470998 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
HDAC8-216ENST00000470998 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
HDAC8-216ENST00000470998 DCAF8Q5TAQ9 597 aa9.22□□□□□ -0.93
HDAC8-216ENST00000470998 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
HDAC8-216ENST00000470998 RASEFQ8IZ41 740 aa9.21□□□□□ -0.94
HDAC8-216ENST00000470998 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
HDAC8-216ENST00000470998 NUBP1P53384 320 aa9.2□□□□□ -0.94
HDAC8-216ENST00000470998 GSE1Q14687 1217 aa9.2□□□□□ -0.94
HDAC8-216ENST00000470998 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
HDAC8-216ENST00000470998 FHAD1B1AJZ9 1412 aa9.2□□□□□ -0.94
HDAC8-216ENST00000470998 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
HDAC8-216ENST00000470998 ERICH3Q5RHP9 1530 aa9.18□□□□□ -0.94
HDAC8-216ENST00000470998 PBRM1Q86U86 1689 aa9.18□□□□□ -0.94
HDAC8-216ENST00000470998 NUP160Q12769 1436 aa9.17□□□□□ -0.94
HDAC8-216ENST00000470998 ADAMTS12P58397 1594 aa9.16□□□□□ -0.94
HDAC8-216ENST00000470998 EVX2Q03828 476 aa9.13□□□□□ -0.95
HDAC8-216ENST00000470998 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
HDAC8-216ENST00000470998 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
HDAC8-216ENST00000470998 PHF12Q96QT6 1004 aa9.11□□□□□ -0.95
HDAC8-216ENST00000470998 EEA1Q15075 1411 aa9.11□□□□□ -0.95
HDAC8-216ENST00000470998 CEP170Q5SW79 1584 aa9.11□□□□□ -0.95
HDAC8-216ENST00000470998 CLCN6P51797 869 aa9.1□□□□□ -0.95
HDAC8-216ENST00000470998 CCDC61Q9Y6R9 512 aa9.1□□□□□ -0.95
HDAC8-216ENST00000470998 KIF27Q86VH2 1401 aa9.1□□□□□ -0.95
HDAC8-216ENST00000470998 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
HDAC8-216ENST00000470998 SHROOM2Q13796 1616 aa9.08□□□□□ -0.96
HDAC8-216ENST00000470998 PYGBP11216 843 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms