RNA–Protein interactions for RNA: ENST00000470441.1

IFRD1-212, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2

Gene IFRD1, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-212ENST00000470441 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
IFRD1-212ENST00000470441 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
IFRD1-212ENST00000470441 LHX8Q68G74 356 aa14.4□□□□□ -0.1
IFRD1-212ENST00000470441 NUBP1P53384 320 aa14.37□□□□□ -0.11
IFRD1-212ENST00000470441 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
IFRD1-212ENST00000470441 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
IFRD1-212ENST00000470441 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
IFRD1-212ENST00000470441 MAP3K13O43283 966 aa14.29□□□□□ -0.12
IFRD1-212ENST00000470441 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
IFRD1-212ENST00000470441 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
IFRD1-212ENST00000470441 ATMINO43313 823 aaPredicted RBP14.24□□□□□ -0.13
IFRD1-212ENST00000470441 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
IFRD1-212ENST00000470441 DCAF8Q5TAQ9 597 aa14.21□□□□□ -0.13
IFRD1-212ENST00000470441 TRPC6Q9Y210 931 aa14.19□□□□□ -0.14
IFRD1-212ENST00000470441 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
IFRD1-212ENST00000470441 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
IFRD1-212ENST00000470441 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
IFRD1-212ENST00000470441 TIE1P35590 1138 aa14.16□□□□□ -0.14
IFRD1-212ENST00000470441 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
IFRD1-212ENST00000470441 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
IFRD1-212ENST00000470441 METRNQ9UJH8 293 aa14.15□□□□□ -0.14
IFRD1-212ENST00000470441 C7P10643 843 aa14.12□□□□□ -0.15
IFRD1-212ENST00000470441 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
IFRD1-212ENST00000470441 PYGBP11216 843 aa14.09□□□□□ -0.15
IFRD1-212ENST00000470441 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
IFRD1-212ENST00000470441 GSE1Q14687 1217 aa14.08□□□□□ -0.16
IFRD1-212ENST00000470441 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
IFRD1-212ENST00000470441 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
IFRD1-212ENST00000470441 SPOCK2Q92563 424 aa14.04□□□□□ -0.16
IFRD1-212ENST00000470441 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
IFRD1-212ENST00000470441 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
IFRD1-212ENST00000470441 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
IFRD1-212ENST00000470441 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
IFRD1-212ENST00000470441 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
IFRD1-212ENST00000470441 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
IFRD1-212ENST00000470441 SEC24BO95487 1268 aa13.92□□□□□ -0.18
IFRD1-212ENST00000470441 IER5LQ5T953 404 aa13.92□□□□□ -0.18
IFRD1-212ENST00000470441 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
IFRD1-212ENST00000470441 CHRM1P11229 460 aaPredicted RBP13.91□□□□□ -0.18
IFRD1-212ENST00000470441 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
IFRD1-212ENST00000470441 MAMSTRQ6ZN01 415 aa13.89□□□□□ -0.19
IFRD1-212ENST00000470441 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
IFRD1-212ENST00000470441 SCUBE2Q9NQ36 999 aa13.84□□□□□ -0.19
IFRD1-212ENST00000470441 PLCG2P16885 1265 aa13.8□□□□□ -0.2
IFRD1-212ENST00000470441 PSEN1P49768 467 aa13.77□□□□□ -0.21
IFRD1-212ENST00000470441 IRX5P78411 483 aaPredicted RBP13.77□□□□□ -0.21
IFRD1-212ENST00000470441 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
IFRD1-212ENST00000470441 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
IFRD1-212ENST00000470441 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
IFRD1-212ENST00000470441 OCEL1Q9H607 264 aa13.72□□□□□ -0.21
IFRD1-212ENST00000470441 MKRN3Q13064 507 aaKnown RBP13.7□□□□□ -0.22
IFRD1-212ENST00000470441 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
IFRD1-212ENST00000470441 PDCD7Q8N8D1 485 aaKnown RBP13.6□□□□□ -0.23
IFRD1-212ENST00000470441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■□□□□ 11.3
IFRD1-212ENST00000470441 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
IFRD1-212ENST00000470441 FAM163AQ96GL9 167 aaPredicted RBP13.56□□□□□ -0.24
IFRD1-212ENST00000470441 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
IFRD1-212ENST00000470441 POTEMA6NI47 508 aa13.54□□□□□ -0.24
IFRD1-212ENST00000470441 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
IFRD1-212ENST00000470441 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
IFRD1-212ENST00000470441 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
IFRD1-212ENST00000470441 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
IFRD1-212ENST00000470441 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
IFRD1-212ENST00000470441 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
IFRD1-212ENST00000470441 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
IFRD1-212ENST00000470441 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
IFRD1-212ENST00000470441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
IFRD1-212ENST00000470441 EFCAB3Q8N7B9 438 aa13.46□□□□□ -0.25
IFRD1-212ENST00000470441 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
IFRD1-212ENST00000470441 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
IFRD1-212ENST00000470441 G3V3G9 751 aa13.42□□□□□ -0.26
IFRD1-212ENST00000470441 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
IFRD1-212ENST00000470441 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
IFRD1-212ENST00000470441 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
IFRD1-212ENST00000470441 SNPHO15079 494 aa13.36□□□□□ -0.27
IFRD1-212ENST00000470441 PKD2Q13563 968 aa13.36□□□□□ -0.27
IFRD1-212ENST00000470441 SOX12O15370 315 aa13.35□□□□□ -0.27
IFRD1-212ENST00000470441 ST18O60284 1047 aa13.34□□□□□ -0.27
IFRD1-212ENST00000470441 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
IFRD1-212ENST00000470441 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
IFRD1-212ENST00000470441 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
IFRD1-212ENST00000470441 PLSCR2Q9NRY7 297 aa13.3□□□□□ -0.28
IFRD1-212ENST00000470441 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
IFRD1-212ENST00000470441 RGL2O15211 777 aa13.29□□□□□ -0.28
IFRD1-212ENST00000470441 STK25O00506 426 aa13.28□□□□□ -0.28
IFRD1-212ENST00000470441 MS4A4AQ96JQ5 239 aa13.26□□□□□ -0.29
IFRD1-212ENST00000470441 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
IFRD1-212ENST00000470441 NLRP6P59044 892 aa13.23□□□□□ -0.29
IFRD1-212ENST00000470441 MICALL2Q8IY33 904 aa13.23□□□□□ -0.29
IFRD1-212ENST00000470441 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
IFRD1-212ENST00000470441 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
IFRD1-212ENST00000470441 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
IFRD1-212ENST00000470441 MFRPQ9BY79 579 aa13.16□□□□□ -0.3
IFRD1-212ENST00000470441 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
IFRD1-212ENST00000470441 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
IFRD1-212ENST00000470441 EMP3P54852 163 aa13.11□□□□□ -0.31
IFRD1-212ENST00000470441 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
IFRD1-212ENST00000470441 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
IFRD1-212ENST00000470441 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
IFRD1-212ENST00000470441 HS6ST3Q8IZP7 471 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms