RNA–Protein interactions for RNA: ENST00000470441.1

IFRD1-212, Transcript of interferon related developmental regulator 1, humanhuman

TSL 2

Gene IFRD1, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-212ENST00000470441 AEBP2Q6ZN18 517 aaPredicted RBP29.1■■■□□ 2.25
IFRD1-212ENST00000470441 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
IFRD1-212ENST00000470441 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
IFRD1-212ENST00000470441 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
IFRD1-212ENST00000470441 FOXD1Q16676 465 aa23.09■■□□□ 1.29
IFRD1-212ENST00000470441 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
IFRD1-212ENST00000470441 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
IFRD1-212ENST00000470441 ADRA2BP18089 450 aa21.7■■□□□ 1.06
IFRD1-212ENST00000470441 PIAS4Q8N2W9 510 aaPredicted RBP21.67■■□□□ 1.06
IFRD1-212ENST00000470441 MSH5O43196 834 aa21.57■■□□□ 1.04
IFRD1-212ENST00000470441 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
IFRD1-212ENST00000470441 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
IFRD1-212ENST00000470441 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
IFRD1-212ENST00000470441 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
IFRD1-212ENST00000470441 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
IFRD1-212ENST00000470441 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
IFRD1-212ENST00000470441 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
IFRD1-212ENST00000470441 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
IFRD1-212ENST00000470441 NCBP3Q53F19 620 aaKnown RBP18.96■□□□□ 0.63
IFRD1-212ENST00000470441 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
IFRD1-212ENST00000470441 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
IFRD1-212ENST00000470441 KCNA4P22459 653 aa18.48■□□□□ 0.55
IFRD1-212ENST00000470441 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
IFRD1-212ENST00000470441 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
IFRD1-212ENST00000470441 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
IFRD1-212ENST00000470441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
IFRD1-212ENST00000470441 C1QBPQ07021 282 aaKnown RBP18.15■□□□□ 0.5
IFRD1-212ENST00000470441 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
IFRD1-212ENST00000470441 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
IFRD1-212ENST00000470441 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
IFRD1-212ENST00000470441 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
IFRD1-212ENST00000470441 CAPN15O75808 1086 aa17.48■□□□□ 0.39
IFRD1-212ENST00000470441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
IFRD1-212ENST00000470441 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
IFRD1-212ENST00000470441 APLP2Q06481 763 aa17.39■□□□□ 0.37
IFRD1-212ENST00000470441 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
IFRD1-212ENST00000470441 DSG3P32926 999 aa17.3■□□□□ 0.36
IFRD1-212ENST00000470441 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
IFRD1-212ENST00000470441 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
IFRD1-212ENST00000470441 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
IFRD1-212ENST00000470441 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
IFRD1-212ENST00000470441 ABCB7O75027 752 aa17.09■□□□□ 0.33
IFRD1-212ENST00000470441 ZBTB22O15209 634 aa16.97■□□□□ 0.31
IFRD1-212ENST00000470441 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
IFRD1-212ENST00000470441 POLA2Q14181 598 aa16.81■□□□□ 0.28
IFRD1-212ENST00000470441 ATXN8OSP0DMR3 200 aa16.64■□□□□ 0.25
IFRD1-212ENST00000470441 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
IFRD1-212ENST00000470441 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.24
IFRD1-212ENST00000470441 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
IFRD1-212ENST00000470441 EHMT2Q96KQ7 1210 aa16.32■□□□□ 0.2
IFRD1-212ENST00000470441 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
IFRD1-212ENST00000470441 POTEHQ6S545 545 aa16.26■□□□□ 0.19
IFRD1-212ENST00000470441 FBLN2P98095 1184 aa16.21■□□□□ 0.19
IFRD1-212ENST00000470441 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
IFRD1-212ENST00000470441 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
IFRD1-212ENST00000470441 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
IFRD1-212ENST00000470441 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
IFRD1-212ENST00000470441 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
IFRD1-212ENST00000470441 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
IFRD1-212ENST00000470441 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
IFRD1-212ENST00000470441 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
IFRD1-212ENST00000470441 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
IFRD1-212ENST00000470441 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
IFRD1-212ENST00000470441 PIP4P2Q8N4L2 257 aa15.73■□□□□ 0.11
IFRD1-212ENST00000470441 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
IFRD1-212ENST00000470441 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
IFRD1-212ENST00000470441 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
IFRD1-212ENST00000470441 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
IFRD1-212ENST00000470441 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.07
IFRD1-212ENST00000470441 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
IFRD1-212ENST00000470441 PRR29P0C7W0 189 aa15.42■□□□□ 0.06
IFRD1-212ENST00000470441 HAX1O00165 279 aa15.41■□□□□ 0.06
IFRD1-212ENST00000470441 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
IFRD1-212ENST00000470441 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
IFRD1-212ENST00000470441 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
IFRD1-212ENST00000470441 EVX2Q03828 476 aa15.18■□□□□ 0.02
IFRD1-212ENST00000470441 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
IFRD1-212ENST00000470441 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
IFRD1-212ENST00000470441 CREBZFQ9NS37 354 aa15.07■□□□□ 0
IFRD1-212ENST00000470441 PROM2Q8N271 834 aa15.06■□□□□ 0
IFRD1-212ENST00000470441 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
IFRD1-212ENST00000470441 GABBR2O75899 941 aa14.89□□□□□ -0.03
IFRD1-212ENST00000470441 FKBP8Q14318 412 aa14.88□□□□□ -0.03
IFRD1-212ENST00000470441 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
IFRD1-212ENST00000470441 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
IFRD1-212ENST00000470441 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
IFRD1-212ENST00000470441 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
IFRD1-212ENST00000470441 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
IFRD1-212ENST00000470441 CLCN6P51797 869 aa14.74□□□□□ -0.05
IFRD1-212ENST00000470441 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
IFRD1-212ENST00000470441 MIER1Q8N108 512 aa14.71□□□□□ -0.05
IFRD1-212ENST00000470441 PLCD3Q8N3E9 789 aa14.64□□□□□ -0.07
IFRD1-212ENST00000470441 PHF12Q96QT6 1004 aa14.61□□□□□ -0.07
IFRD1-212ENST00000470441 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
IFRD1-212ENST00000470441 DCBLD2Q96PD2 775 aa14.56□□□□□ -0.08
IFRD1-212ENST00000470441 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
IFRD1-212ENST00000470441 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
IFRD1-212ENST00000470441 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
IFRD1-212ENST00000470441 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
IFRD1-212ENST00000470441 RASEFQ8IZ41 740 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms