RNA–Protein interactions for RNA: ENST00000468472.1

AC006254.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC006254.1, Length 5,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006254.1-201ENST00000468472 UPF2Q9HAU5 1272 aaKnown RBP16.94■□□□□ 0.3
AC006254.1-201ENST00000468472 CEP162Q5TB80 1403 aa16.94■□□□□ 0.3
AC006254.1-201ENST00000468472 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.94■□□□□ 0.3
AC006254.1-201ENST00000468472 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
AC006254.1-201ENST00000468472 PPP1R15AO75807 674 aaPredicted RBP16.93■□□□□ 0.3
AC006254.1-201ENST00000468472 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
AC006254.1-201ENST00000468472 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
AC006254.1-201ENST00000468472 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
AC006254.1-201ENST00000468472 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
AC006254.1-201ENST00000468472 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
AC006254.1-201ENST00000468472 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
AC006254.1-201ENST00000468472 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
AC006254.1-201ENST00000468472 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
AC006254.1-201ENST00000468472 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
AC006254.1-201ENST00000468472 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.28
AC006254.1-201ENST00000468472 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
AC006254.1-201ENST00000468472 A0A0G2JS52 829 aa16.82■□□□□ 0.28
AC006254.1-201ENST00000468472 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
AC006254.1-201ENST00000468472 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
AC006254.1-201ENST00000468472 MIER1Q8N108 512 aa16.8■□□□□ 0.28
AC006254.1-201ENST00000468472 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
AC006254.1-201ENST00000468472 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
AC006254.1-201ENST00000468472 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.27
AC006254.1-201ENST00000468472 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
AC006254.1-201ENST00000468472 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
AC006254.1-201ENST00000468472 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
AC006254.1-201ENST00000468472 CFAP53Q96M91 514 aa16.71■□□□□ 0.26
AC006254.1-201ENST00000468472 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
AC006254.1-201ENST00000468472 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
AC006254.1-201ENST00000468472 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
AC006254.1-201ENST00000468472 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
AC006254.1-201ENST00000468472 PPM1GO15355 546 aaPredicted RBP16.66■□□□□ 0.26
AC006254.1-201ENST00000468472 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
AC006254.1-201ENST00000468472 CUX2O14529 1486 aa16.64■□□□□ 0.25
AC006254.1-201ENST00000468472 CARMIL1Q5VZK9 1371 aa16.64■□□□□ 0.25
AC006254.1-201ENST00000468472 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
AC006254.1-201ENST00000468472 POGKQ9P215 609 aa16.63■□□□□ 0.25
AC006254.1-201ENST00000468472 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
AC006254.1-201ENST00000468472 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
AC006254.1-201ENST00000468472 NBR1Q14596 966 aa16.6■□□□□ 0.25
AC006254.1-201ENST00000468472 ARXQ96QS3 562 aa16.57■□□□□ 0.24
AC006254.1-201ENST00000468472 SOGA1O94964 1423 aa16.56■□□□□ 0.24
AC006254.1-201ENST00000468472 MAPK8IP3Q9UPT6 1336 aa16.56■□□□□ 0.24
AC006254.1-201ENST00000468472 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
AC006254.1-201ENST00000468472 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
AC006254.1-201ENST00000468472 KANK1Q14678 1352 aa16.54■□□□□ 0.24
AC006254.1-201ENST00000468472 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
AC006254.1-201ENST00000468472 LAS1LQ9Y4W2 734 aaKnown RBP16.54■□□□□ 0.24
AC006254.1-201ENST00000468472 TNNT2P45379 298 aaPredicted RBP16.52■□□□□ 0.24
AC006254.1-201ENST00000468472 FTSJ3Q8IY81 847 aaKnown RBP16.52■□□□□ 0.24
AC006254.1-201ENST00000468472 CC2D1BQ5T0F9 858 aaKnown RBP16.51■□□□□ 0.23
AC006254.1-201ENST00000468472 DCAF11Q8TEB1 546 aa16.51■□□□□ 0.23
AC006254.1-201ENST00000468472 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
AC006254.1-201ENST00000468472 MLECQ14165 292 aa16.5■□□□□ 0.23
AC006254.1-201ENST00000468472 BECN1Q14457 450 aa16.49■□□□□ 0.23
AC006254.1-201ENST00000468472 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
AC006254.1-201ENST00000468472 EIF5BO60841 1220 aaKnown RBP16.48■□□□□ 0.23
AC006254.1-201ENST00000468472 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
AC006254.1-201ENST00000468472 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
AC006254.1-201ENST00000468472 TMF1P82094 1093 aa16.47■□□□□ 0.23
AC006254.1-201ENST00000468472 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
AC006254.1-201ENST00000468472 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
AC006254.1-201ENST00000468472 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
AC006254.1-201ENST00000468472 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
AC006254.1-201ENST00000468472 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
AC006254.1-201ENST00000468472 HDGFP51858 240 aaKnown RBP16.44■□□□□ 0.22
AC006254.1-201ENST00000468472 CARMIL2Q6F5E8 1435 aa16.44■□□□□ 0.22
AC006254.1-201ENST00000468472 CASC1Q6TDU7 716 aa16.44■□□□□ 0.22
AC006254.1-201ENST00000468472 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
AC006254.1-201ENST00000468472 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
AC006254.1-201ENST00000468472 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
AC006254.1-201ENST00000468472 GGT6Q6P531 493 aa16.41■□□□□ 0.22
AC006254.1-201ENST00000468472 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
AC006254.1-201ENST00000468472 SETD5Q9C0A6 1442 aa16.4■□□□□ 0.22
AC006254.1-201ENST00000468472 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.22
AC006254.1-201ENST00000468472 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
AC006254.1-201ENST00000468472 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
AC006254.1-201ENST00000468472 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.21
AC006254.1-201ENST00000468472 GOLGA6L22H0YM25 854 aa16.38■□□□□ 0.21
AC006254.1-201ENST00000468472 PKD2Q13563 968 aa16.37■□□□□ 0.21
AC006254.1-201ENST00000468472 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
AC006254.1-201ENST00000468472 SOX12O15370 315 aa16.36■□□□□ 0.21
AC006254.1-201ENST00000468472 KANK4Q5T7N3 995 aaPredicted RBP16.36■□□□□ 0.21
AC006254.1-201ENST00000468472 TIMELESSQ9UNS1 1208 aa16.36■□□□□ 0.21
AC006254.1-201ENST00000468472 NPHP1O15259 732 aa16.34■□□□□ 0.21
AC006254.1-201ENST00000468472 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
AC006254.1-201ENST00000468472 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
AC006254.1-201ENST00000468472 FOXD1Q16676 465 aa16.33■□□□□ 0.21
AC006254.1-201ENST00000468472 STK26Q9P289 416 aa16.33■□□□□ 0.21
AC006254.1-201ENST00000468472 MS4A1P11836 297 aa16.33■□□□□ 0.2
AC006254.1-201ENST00000468472 RGS3P49796 1198 aa16.33■□□□□ 0.2
AC006254.1-201ENST00000468472 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
AC006254.1-201ENST00000468472 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
AC006254.1-201ENST00000468472 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
AC006254.1-201ENST00000468472 PPP4R2Q9NY27 417 aa16.32■□□□□ 0.2
AC006254.1-201ENST00000468472 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
AC006254.1-201ENST00000468472 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
AC006254.1-201ENST00000468472 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
AC006254.1-201ENST00000468472 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.2
AC006254.1-201ENST00000468472 NUP155O75694 1391 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms