RNA–Protein interactions for RNA: ENST00000466189.5

PHC3-202, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-202ENST00000466189 PRDM2Q13029 1718 aa10.54□□□□□ -0.72
PHC3-202ENST00000466189 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
PHC3-202ENST00000466189 CEP164Q9UPV0 1460 aa10.51□□□□□ -0.73
PHC3-202ENST00000466189 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
PHC3-202ENST00000466189 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
PHC3-202ENST00000466189 URB2Q14146 1524 aaKnown RBP10.48□□□□□ -0.73
PHC3-202ENST00000466189 AKT1S1Q96B36 256 aa10.47□□□□□ -0.73
PHC3-202ENST00000466189 REM2Q8IYK8 340 aaPredicted RBP10.4□□□□□ -0.74
PHC3-202ENST00000466189 PROM2Q8N271 834 aa10.36□□□□□ -0.75
PHC3-202ENST00000466189 TOPBP1Q92547 1522 aa10.36□□□□□ -0.75
PHC3-202ENST00000466189 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
PHC3-202ENST00000466189 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
PHC3-202ENST00000466189 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
PHC3-202ENST00000466189 DNMBPQ6XZF7 1577 aa10.31□□□□□ -0.76
PHC3-202ENST00000466189 IFT140Q96RY7 1462 aa10.31□□□□□ -0.76
PHC3-202ENST00000466189 TARBP1Q13395 1621 aaKnown RBP10.31□□□□□ -0.76
PHC3-202ENST00000466189 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
PHC3-202ENST00000466189 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
PHC3-202ENST00000466189 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
PHC3-202ENST00000466189 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
PHC3-202ENST00000466189 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
PHC3-202ENST00000466189 CHD1O14646 1710 aa10.24□□□□□ -0.77
PHC3-202ENST00000466189 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.771e-7■■■■■ 32.3
PHC3-202ENST00000466189 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
PHC3-202ENST00000466189 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
PHC3-202ENST00000466189 CUX1P39880 1505 aa10.22□□□□□ -0.77
PHC3-202ENST00000466189 POTEHQ6S545 545 aa10.21□□□□□ -0.77
PHC3-202ENST00000466189 RIMBP3CA6NJZ7 1639 aa10.21□□□□□ -0.78
PHC3-202ENST00000466189 RIMBP3BA6NNM3 1639 aa10.21□□□□□ -0.78
PHC3-202ENST00000466189 RIMBP3Q9UFD9 1639 aa10.21□□□□□ -0.78
PHC3-202ENST00000466189 SOGA1O94964 1423 aa10.19□□□□□ -0.78
PHC3-202ENST00000466189 FGD5Q6ZNL6 1462 aa10.18□□□□□ -0.78
PHC3-202ENST00000466189 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
PHC3-202ENST00000466189 STAG3Q9UJ98 1225 aa10.18□□□□□ -0.78
PHC3-202ENST00000466189 WDR97A6NE52 1622 aa10.18□□□□□ -0.78
PHC3-202ENST00000466189 TDRD9Q8NDG6 1382 aaKnown RBP10.17□□□□□ -0.78
PHC3-202ENST00000466189 SUPT5HO00267 1087 aaKnown RBP10.17□□□□□ -0.78
PHC3-202ENST00000466189 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
PHC3-202ENST00000466189 ARHGEF11O15085 1522 aa10.15□□□□□ -0.78
PHC3-202ENST00000466189 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
PHC3-202ENST00000466189 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
PHC3-202ENST00000466189 VASPP50552 380 aaPredicted RBP10.11□□□□□ -0.79
PHC3-202ENST00000466189 MIER1Q8N108 512 aa10.11□□□□□ -0.79
PHC3-202ENST00000466189 SNAPC4Q5SXM2 1469 aa10.1□□□□□ -0.79
PHC3-202ENST00000466189 BIVM-ERCC5R4GMW8 1640 aa10.09□□□□□ -0.79
PHC3-202ENST00000466189 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
PHC3-202ENST00000466189 CLASP1Q7Z460 1538 aa10.08□□□□□ -0.8
PHC3-202ENST00000466189 ABCA5Q8WWZ7 1642 aa10.08□□□□□ -0.8
PHC3-202ENST00000466189 GRIN2BQ13224 1484 aa10.08□□□□□ -0.8
PHC3-202ENST00000466189 MAGI1Q96QZ7 1491 aaPredicted RBP10.08□□□□□ -0.8
PHC3-202ENST00000466189 ABCA10Q8WWZ4 1543 aa10.07□□□□□ -0.8
PHC3-202ENST00000466189 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
PHC3-202ENST00000466189 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
PHC3-202ENST00000466189 TOP2BQ02880 1626 aa10.07□□□□□ -0.8
PHC3-202ENST00000466189 SYNJ1O43426 1573 aa10.06□□□□□ -0.8
PHC3-202ENST00000466189 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
PHC3-202ENST00000466189 CYB5RLQ6IPT4 315 aa10.06□□□□□ -0.8
PHC3-202ENST00000466189 SYNJ2O15056 1496 aa10.05□□□□□ -0.8
PHC3-202ENST00000466189 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
PHC3-202ENST00000466189 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
PHC3-202ENST00000466189 FXR2P51116 673 aaKnown RBP eCLIP10.05□□□□□ -0.8
PHC3-202ENST00000466189 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
PHC3-202ENST00000466189 IFNLR1Q8IU57 520 aaPredicted RBP10.02□□□□□ -0.81
PHC3-202ENST00000466189 WRNQ14191 1432 aaPredicted RBP eCLIP10.01□□□□□ -0.81
PHC3-202ENST00000466189 KLHL34Q8N239 644 aa10□□□□□ -0.81
PHC3-202ENST00000466189 ADAMTS12P58397 1594 aa9.97□□□□□ -0.81
PHC3-202ENST00000466189 GRIN2AQ12879 1464 aa9.97□□□□□ -0.81
PHC3-202ENST00000466189 CEP170Q5SW79 1584 aa9.97□□□□□ -0.81
PHC3-202ENST00000466189 ERCC6L2Q5T890 1561 aa9.96□□□□□ -0.82
PHC3-202ENST00000466189 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
PHC3-202ENST00000466189 SHROOM2Q13796 1616 aa9.94□□□□□ -0.82
PHC3-202ENST00000466189 NUP160Q12769 1436 aa9.94□□□□□ -0.82
PHC3-202ENST00000466189 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
PHC3-202ENST00000466189 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
PHC3-202ENST00000466189 FHAD1B1AJZ9 1412 aa9.93□□□□□ -0.82
PHC3-202ENST00000466189 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
PHC3-202ENST00000466189 IGF1RP08069 1367 aa9.87□□□□□ -0.83
PHC3-202ENST00000466189 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
PHC3-202ENST00000466189 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
PHC3-202ENST00000466189 RUSC2Q8N2Y8 1516 aa9.83□□□□□ -0.84
PHC3-202ENST00000466189 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
PHC3-202ENST00000466189 KIF13AQ9H1H9 1805 aa9.83□□□□□ -0.84
PHC3-202ENST00000466189 PRG4Q92954 1404 aaPredicted RBP9.82□□□□□ -0.84
PHC3-202ENST00000466189 HAX1O00165 279 aa9.82□□□□□ -0.84
PHC3-202ENST00000466189 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
PHC3-202ENST00000466189 NUBP1P53384 320 aa9.82□□□□□ -0.84
PHC3-202ENST00000466189 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
PHC3-202ENST00000466189 CUL7Q14999 1698 aa9.82□□□□□ -0.84
PHC3-202ENST00000466189 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
PHC3-202ENST00000466189 KIF27Q86VH2 1401 aa9.81□□□□□ -0.84
PHC3-202ENST00000466189 KIAA0586Q9BVV6 1533 aa9.79□□□□□ -0.84
PHC3-202ENST00000466189 CIZ1Q9ULV3 898 aaPredicted RBP9.78□□□□□ -0.84
PHC3-202ENST00000466189 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
PHC3-202ENST00000466189 EVX2Q03828 476 aa9.76□□□□□ -0.85
PHC3-202ENST00000466189 CARMIL1Q5VZK9 1371 aa9.75□□□□□ -0.85
PHC3-202ENST00000466189 ADCY10Q96PN6 1610 aa9.75□□□□□ -0.85
PHC3-202ENST00000466189 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
PHC3-202ENST00000466189 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
PHC3-202ENST00000466189 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
PHC3-202ENST00000466189 C19orf67A6NJJ6 358 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms