RNA–Protein interactions for RNA: ENST00000464787.1

UBP1-206, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-206ENST00000464787 PRKAR2AP13861 404 aaKnown RBP9.8□□□□□ -0.84
UBP1-206ENST00000464787 ZNF692Q9BU19 519 aaPredicted RBP9.8□□□□□ -0.84
UBP1-206ENST00000464787 SPDYE1Q8NFV5 336 aaPredicted RBP9.76□□□□□ -0.85
UBP1-206ENST00000464787 SSUH2Q9Y2M2 353 aa9.76□□□□□ -0.85
UBP1-206ENST00000464787 TOP2AP11388 1531 aaKnown RBP9.74□□□□□ -0.85
UBP1-206ENST00000464787 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
UBP1-206ENST00000464787 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
UBP1-206ENST00000464787 LAMC3Q9Y6N6 1575 aa9.71□□□□□ -0.86
UBP1-206ENST00000464787 CADPSQ9ULU8 1353 aa9.7□□□□□ -0.86
UBP1-206ENST00000464787 KIF21AQ7Z4S6 1674 aa9.67□□□□□ -0.86
UBP1-206ENST00000464787 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
UBP1-206ENST00000464787 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
UBP1-206ENST00000464787 CFTRP13569 1480 aa9.64□□□□□ -0.87
UBP1-206ENST00000464787 PDS5BQ9NTI5 1447 aa9.64□□□□□ -0.87
UBP1-206ENST00000464787 THOC2Q8NI27 1593 aaKnown RBP9.63□□□□□ -0.87
UBP1-206ENST00000464787 CUX2O14529 1486 aa9.61□□□□□ -0.87
UBP1-206ENST00000464787 PRR29P0C7W0 189 aa9.61□□□□□ -0.87
UBP1-206ENST00000464787 SUPT5HO00267 1087 aaKnown RBP9.6□□□□□ -0.87
UBP1-206ENST00000464787 GABBR2O75899 941 aa9.59□□□□□ -0.87
UBP1-206ENST00000464787 FANCD2Q9BXW9 1451 aa9.59□□□□□ -0.87
UBP1-206ENST00000464787 MRC2Q9UBG0 1479 aa9.56□□□□□ -0.88
UBP1-206ENST00000464787 CEP164Q9UPV0 1460 aa9.56□□□□□ -0.88
UBP1-206ENST00000464787 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
UBP1-206ENST00000464787 WDR62O43379 1518 aa9.54□□□□□ -0.88
UBP1-206ENST00000464787 PRDM2Q13029 1718 aa9.53□□□□□ -0.88
UBP1-206ENST00000464787 URB2Q14146 1524 aaKnown RBP9.51□□□□□ -0.89
UBP1-206ENST00000464787 CD44P16070 742 aaKnown RBP9.47□□□□□ -0.89
UBP1-206ENST00000464787 LHX8Q68G74 356 aa9.47□□□□□ -0.89
UBP1-206ENST00000464787 FARP1Q9Y4F1 1045 aaPredicted RBP9.47□□□□□ -0.89
UBP1-206ENST00000464787 SPDYE4A6NLX3 237 aa9.44□□□□□ -0.9
UBP1-206ENST00000464787 TOPBP1Q92547 1522 aa9.44□□□□□ -0.9
UBP1-206ENST00000464787 POTEIP0CG38 1075 aa9.42□□□□□ -0.9
UBP1-206ENST00000464787 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
UBP1-206ENST00000464787 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.9
UBP1-206ENST00000464787 ZNF608Q9ULD9 1512 aaPredicted RBP9.38□□□□□ -0.91
UBP1-206ENST00000464787 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
UBP1-206ENST00000464787 CUX1P39880 1505 aa9.37□□□□□ -0.91
UBP1-206ENST00000464787 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
UBP1-206ENST00000464787 POLA1P09884 1462 aaPredicted RBP9.36□□□□□ -0.91
UBP1-206ENST00000464787 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
UBP1-206ENST00000464787 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
UBP1-206ENST00000464787 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
UBP1-206ENST00000464787 PLSCR2Q9NRY7 297 aa9.33□□□□□ -0.92
UBP1-206ENST00000464787 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
UBP1-206ENST00000464787 FGD5Q6ZNL6 1462 aa9.33□□□□□ -0.92
UBP1-206ENST00000464787 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
UBP1-206ENST00000464787 AQRO60306 1485 aaKnown RBP eCLIP9.31□□□□□ -0.92
UBP1-206ENST00000464787 SOGA1O94964 1423 aa9.31□□□□□ -0.92
UBP1-206ENST00000464787 EIF4G3O43432 1585 aaKnown RBP9.3□□□□□ -0.92
UBP1-206ENST00000464787 TDRD9Q8NDG6 1382 aaKnown RBP9.29□□□□□ -0.92
UBP1-206ENST00000464787 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
UBP1-206ENST00000464787 SYNJ1O43426 1573 aa9.28□□□□□ -0.92
UBP1-206ENST00000464787 ZNF579Q8NAF0 562 aaKnown RBP9.27□□□□□ -0.93
UBP1-206ENST00000464787 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
UBP1-206ENST00000464787 WRNQ14191 1432 aaPredicted RBP eCLIP9.27□□□□□ -0.93
UBP1-206ENST00000464787 GALR2O43603 387 aaPredicted RBP9.26□□□□□ -0.93
UBP1-206ENST00000464787 TOP2BQ02880 1626 aa9.26□□□□□ -0.93
UBP1-206ENST00000464787 WDR97A6NE52 1622 aa9.25□□□□□ -0.93
UBP1-206ENST00000464787 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
UBP1-206ENST00000464787 HAP1P54257 671 aaPredicted RBP9.25□□□□□ -0.93
UBP1-206ENST00000464787 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
UBP1-206ENST00000464787 PHF12Q96QT6 1004 aa9.23□□□□□ -0.93
UBP1-206ENST00000464787 ABCA10Q8WWZ4 1543 aa9.22□□□□□ -0.93
UBP1-206ENST00000464787 PROM2Q8N271 834 aa9.22□□□□□ -0.93
UBP1-206ENST00000464787 SNAPC4Q5SXM2 1469 aa9.21□□□□□ -0.94
UBP1-206ENST00000464787 CHD1O14646 1710 aa9.2□□□□□ -0.94
UBP1-206ENST00000464787 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
UBP1-206ENST00000464787 GAPVD1Q14C86 1478 aa9.2□□□□□ -0.94
UBP1-206ENST00000464787 ABCA5Q8WWZ7 1642 aa9.2□□□□□ -0.94
UBP1-206ENST00000464787 GRIN2BQ13224 1484 aa9.19□□□□□ -0.94
UBP1-206ENST00000464787 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
UBP1-206ENST00000464787 CLCN6P51797 869 aa9.18□□□□□ -0.94
UBP1-206ENST00000464787 PBRM1Q86U86 1689 aa9.18□□□□□ -0.94
UBP1-206ENST00000464787 MAGI1Q96QZ7 1491 aaPredicted RBP9.15□□□□□ -0.94
UBP1-206ENST00000464787 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
UBP1-206ENST00000464787 PAK3O75914 559 aaPredicted RBP9.14□□□□□ -0.95
UBP1-206ENST00000464787 CHMP7Q8WUX9 453 aaPredicted RBP9.14□□□□□ -0.95
UBP1-206ENST00000464787 SYNJ2O15056 1496 aa9.14□□□□□ -0.95
UBP1-206ENST00000464787 POTEB2H3BUK9 544 aa9.13□□□□□ -0.95
UBP1-206ENST00000464787 PELP1Q8IZL8 1130 aaKnown RBP9.11□□□□□ -0.95
UBP1-206ENST00000464787 BCANQ96GW7 911 aa9.11□□□□□ -0.95
UBP1-206ENST00000464787 ADAMTS12P58397 1594 aa9.11□□□□□ -0.95
UBP1-206ENST00000464787 RIMBP3CA6NJZ7 1639 aa9.1□□□□□ -0.95
UBP1-206ENST00000464787 RIMBP3BA6NNM3 1639 aa9.1□□□□□ -0.95
UBP1-206ENST00000464787 RIMBP3Q9UFD9 1639 aa9.1□□□□□ -0.95
UBP1-206ENST00000464787 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
UBP1-206ENST00000464787 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.1□□□□□ -0.95
UBP1-206ENST00000464787 ARHGEF11O15085 1522 aa9.1□□□□□ -0.95
UBP1-206ENST00000464787 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
UBP1-206ENST00000464787 PKD2Q13563 968 aa9.09□□□□□ -0.95
UBP1-206ENST00000464787 TRIM41Q8WV44 630 aa9.09□□□□□ -0.95
UBP1-206ENST00000464787 OTUD5Q96G74 571 aa9.09□□□□□ -0.95
UBP1-206ENST00000464787 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
UBP1-206ENST00000464787 GRIN2AQ12879 1464 aa9.08□□□□□ -0.96
UBP1-206ENST00000464787 FHAD1B1AJZ9 1412 aa9.08□□□□□ -0.96
UBP1-206ENST00000464787 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
UBP1-206ENST00000464787 IGF1RP08069 1367 aa9.08□□□□□ -0.96
UBP1-206ENST00000464787 SPOCK2Q92563 424 aa9.07□□□□□ -0.96
UBP1-206ENST00000464787 MS4A3Q96HJ5 214 aa9.07□□□□□ -0.96
UBP1-206ENST00000464787 KIF27Q86VH2 1401 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms