RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
KDM3A-208ENST00000463013 PELP1Q8IZL8 1130 aaKnown RBP12.27□□□□□ -0.45
KDM3A-208ENST00000463013 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.45
KDM3A-208ENST00000463013 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
KDM3A-208ENST00000463013 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
KDM3A-208ENST00000463013 POTEGQ6S5H5 508 aa12.24□□□□□ -0.45
KDM3A-208ENST00000463013 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
KDM3A-208ENST00000463013 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
KDM3A-208ENST00000463013 SCUBE2Q9NQ36 999 aa12.18□□□□□ -0.46
KDM3A-208ENST00000463013 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
KDM3A-208ENST00000463013 PROM2Q8N271 834 aa12.1□□□□□ -0.47
KDM3A-208ENST00000463013 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
KDM3A-208ENST00000463013 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
KDM3A-208ENST00000463013 FAM163AQ96GL9 167 aaPredicted RBP12.07□□□□□ -0.48
KDM3A-208ENST00000463013 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
KDM3A-208ENST00000463013 TIE1P35590 1138 aa12.05□□□□□ -0.48
KDM3A-208ENST00000463013 MIER1Q8N108 512 aa12.05□□□□□ -0.48
KDM3A-208ENST00000463013 SEC24BO95487 1268 aa12.01□□□□□ -0.49
KDM3A-208ENST00000463013 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
KDM3A-208ENST00000463013 MAP3K13O43283 966 aa11.99□□□□□ -0.49
KDM3A-208ENST00000463013 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
KDM3A-208ENST00000463013 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
KDM3A-208ENST00000463013 IER5LQ5T953 404 aa11.93□□□□□ -0.5
KDM3A-208ENST00000463013 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
KDM3A-208ENST00000463013 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
KDM3A-208ENST00000463013 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
KDM3A-208ENST00000463013 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
KDM3A-208ENST00000463013 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
KDM3A-208ENST00000463013 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
KDM3A-208ENST00000463013 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
KDM3A-208ENST00000463013 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
KDM3A-208ENST00000463013 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
KDM3A-208ENST00000463013 FKBP8Q14318 412 aa11.83□□□□□ -0.52
KDM3A-208ENST00000463013 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
KDM3A-208ENST00000463013 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
KDM3A-208ENST00000463013 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
KDM3A-208ENST00000463013 PLCG2P16885 1265 aa11.77□□□□□ -0.53
KDM3A-208ENST00000463013 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
KDM3A-208ENST00000463013 NUBP1P53384 320 aa11.74□□□□□ -0.53
KDM3A-208ENST00000463013 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
KDM3A-208ENST00000463013 SNPHO15079 494 aa11.7□□□□□ -0.54
KDM3A-208ENST00000463013 ST18O60284 1047 aa11.69□□□□□ -0.54
KDM3A-208ENST00000463013 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
KDM3A-208ENST00000463013 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
KDM3A-208ENST00000463013 IRX5P78411 483 aaPredicted RBP11.64□□□□□ -0.55
KDM3A-208ENST00000463013 DCAF8Q5TAQ9 597 aa11.63□□□□□ -0.55
KDM3A-208ENST00000463013 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
KDM3A-208ENST00000463013 PYGBP11216 843 aa11.54□□□□□ -0.56
KDM3A-208ENST00000463013 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
KDM3A-208ENST00000463013 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
KDM3A-208ENST00000463013 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
KDM3A-208ENST00000463013 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
KDM3A-208ENST00000463013 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
KDM3A-208ENST00000463013 SPNS2Q8IVW8 549 aa11.49□□□□□ -0.57
KDM3A-208ENST00000463013 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
KDM3A-208ENST00000463013 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
KDM3A-208ENST00000463013 ZNF467Q7Z7K2 595 aaPredicted RBP11.48□□□□□ -0.57
KDM3A-208ENST00000463013 GSE1Q14687 1217 aa11.47□□□□□ -0.57
KDM3A-208ENST00000463013 MARVELD3Q96A59 401 aa11.44□□□□□ -0.58
KDM3A-208ENST00000463013 EMP3P54852 163 aa11.41□□□□□ -0.58
KDM3A-208ENST00000463013 KLHL34Q8N239 644 aa11.41□□□□□ -0.58
KDM3A-208ENST00000463013 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
KDM3A-208ENST00000463013 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
KDM3A-208ENST00000463013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.598e-8■■□□□ 12
KDM3A-208ENST00000463013 G3V3G9 751 aa11.35□□□□□ -0.59
KDM3A-208ENST00000463013 PSEN1P49768 467 aa11.33□□□□□ -0.6
KDM3A-208ENST00000463013 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
KDM3A-208ENST00000463013 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
KDM3A-208ENST00000463013 PDAP1Q13442 181 aaKnown RBP11.27□□□□□ -0.61
KDM3A-208ENST00000463013 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
KDM3A-208ENST00000463013 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
KDM3A-208ENST00000463013 ZNF710Q8N1W2 664 aa11.22□□□□□ -0.61
KDM3A-208ENST00000463013 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
KDM3A-208ENST00000463013 KRTAP3-3Q9BYR6 98 aa11.2□□□□□ -0.62
KDM3A-208ENST00000463013 KRTAP3-2Q9BYR7 98 aa11.2□□□□□ -0.62
KDM3A-208ENST00000463013 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
KDM3A-208ENST00000463013 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
KDM3A-208ENST00000463013 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
KDM3A-208ENST00000463013 POTEB3A0JP26 581 aa11.16□□□□□ -0.62
KDM3A-208ENST00000463013 POTEBQ6S5H4 581 aa11.16□□□□□ -0.62
KDM3A-208ENST00000463013 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
KDM3A-208ENST00000463013 ERBB3P21860 1342 aa11.14□□□□□ -0.63
KDM3A-208ENST00000463013 DPY19L2Q6NUT2 758 aa11.14□□□□□ -0.63
KDM3A-208ENST00000463013 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
KDM3A-208ENST00000463013 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
KDM3A-208ENST00000463013 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
KDM3A-208ENST00000463013 IFNLR1Q8IU57 520 aaPredicted RBP11.1□□□□□ -0.63
KDM3A-208ENST00000463013 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
KDM3A-208ENST00000463013 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
KDM3A-208ENST00000463013 RNF166Q96A37 237 aaPredicted RBP11.04□□□□□ -0.64
KDM3A-208ENST00000463013 PTGER2P43116 358 aa11□□□□□ -0.65
KDM3A-208ENST00000463013 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
KDM3A-208ENST00000463013 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
KDM3A-208ENST00000463013 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
KDM3A-208ENST00000463013 EFCAB3Q8N7B9 438 aa10.97□□□□□ -0.65
KDM3A-208ENST00000463013 SOX12O15370 315 aa10.95□□□□□ -0.66
KDM3A-208ENST00000463013 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
KDM3A-208ENST00000463013 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
KDM3A-208ENST00000463013 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
KDM3A-208ENST00000463013 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms