RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
VPS45-205ENST00000462852 NCAPD3P42695 1498 aa15.16■□□□□ 0.02
VPS45-205ENST00000462852 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
VPS45-205ENST00000462852 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
VPS45-205ENST00000462852 HAX1O00165 279 aa15.1■□□□□ 0.01
VPS45-205ENST00000462852 SUPT5HO00267 1087 aaKnown RBP15.08■□□□□ 0
VPS45-205ENST00000462852 FKBP8Q14318 412 aa15.05■□□□□ -0
VPS45-205ENST00000462852 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
VPS45-205ENST00000462852 EVX2Q03828 476 aa15.02■□□□□ -0
VPS45-205ENST00000462852 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
VPS45-205ENST00000462852 SP7Q8TDD2 431 aaPredicted RBP14.99□□□□□ -0.01
VPS45-205ENST00000462852 FARP1Q9Y4F1 1045 aaPredicted RBP14.98□□□□□ -0.01
VPS45-205ENST00000462852 C19orf67A6NJJ6 358 aa14.96□□□□□ -0.01
VPS45-205ENST00000462852 CCDC88BA6NC98 1476 aa14.94□□□□□ -0.02
VPS45-205ENST00000462852 NESP48681 1621 aa14.92□□□□□ -0.02
VPS45-205ENST00000462852 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
VPS45-205ENST00000462852 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
VPS45-205ENST00000462852 THOC2Q8NI27 1593 aaKnown RBP14.82□□□□□ -0.04
VPS45-205ENST00000462852 MNX1P50219 401 aaPredicted RBP14.82□□□□□ -0.04
VPS45-205ENST00000462852 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
VPS45-205ENST00000462852 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
VPS45-205ENST00000462852 CFTRP13569 1480 aa14.72□□□□□ -0.05
VPS45-205ENST00000462852 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.06
VPS45-205ENST00000462852 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
VPS45-205ENST00000462852 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS45-205ENST00000462852 MIER1Q8N108 512 aa14.68□□□□□ -0.06
VPS45-205ENST00000462852 MRC2Q9UBG0 1479 aa14.66□□□□□ -0.06
VPS45-205ENST00000462852 GABBR2O75899 941 aa14.66□□□□□ -0.06
VPS45-205ENST00000462852 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
VPS45-205ENST00000462852 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
VPS45-205ENST00000462852 WDR62O43379 1518 aa14.61□□□□□ -0.07
VPS45-205ENST00000462852 PLCD3Q8N3E9 789 aa14.6□□□□□ -0.07
VPS45-205ENST00000462852 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
VPS45-205ENST00000462852 PLEKHG5O94827 1062 aa14.58□□□□□ -0.08
VPS45-205ENST00000462852 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
VPS45-205ENST00000462852 FBXO3Q9UK99 471 aa14.58□□□□□ -0.08
VPS45-205ENST00000462852 SYNJ1O43426 1573 aa14.58□□□□□ -0.08
VPS45-205ENST00000462852 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
VPS45-205ENST00000462852 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
VPS45-205ENST00000462852 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
VPS45-205ENST00000462852 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
VPS45-205ENST00000462852 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
VPS45-205ENST00000462852 CUX1P39880 1505 aa14.5□□□□□ -0.09
VPS45-205ENST00000462852 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
VPS45-205ENST00000462852 CLCN6P51797 869 aa14.47□□□□□ -0.09
VPS45-205ENST00000462852 RASEFQ8IZ41 740 aa14.46□□□□□ -0.09
VPS45-205ENST00000462852 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
VPS45-205ENST00000462852 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
VPS45-205ENST00000462852 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
VPS45-205ENST00000462852 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
VPS45-205ENST00000462852 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
VPS45-205ENST00000462852 GALR2O43603 387 aaPredicted RBP14.41□□□□□ -0.1
VPS45-205ENST00000462852 NUBP1P53384 320 aa14.41□□□□□ -0.1
VPS45-205ENST00000462852 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
VPS45-205ENST00000462852 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
VPS45-205ENST00000462852 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
VPS45-205ENST00000462852 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
VPS45-205ENST00000462852 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
VPS45-205ENST00000462852 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
VPS45-205ENST00000462852 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
VPS45-205ENST00000462852 KIF12Q96FN5 646 aa14.29□□□□□ -0.12
VPS45-205ENST00000462852 DCBLD2Q96PD2 775 aa14.29□□□□□ -0.12
VPS45-205ENST00000462852 POLA1P09884 1462 aaPredicted RBP14.29□□□□□ -0.12
VPS45-205ENST00000462852 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
VPS45-205ENST00000462852 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.12
VPS45-205ENST00000462852 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
VPS45-205ENST00000462852 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
VPS45-205ENST00000462852 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
VPS45-205ENST00000462852 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
VPS45-205ENST00000462852 MAP3K13O43283 966 aa14.23□□□□□ -0.13
VPS45-205ENST00000462852 ZNF608Q9ULD9 1512 aaPredicted RBP14.23□□□□□ -0.13
VPS45-205ENST00000462852 SOGA1O94964 1423 aa14.22□□□□□ -0.13
VPS45-205ENST00000462852 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
VPS45-205ENST00000462852 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
VPS45-205ENST00000462852 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
VPS45-205ENST00000462852 RUSC2Q8N2Y8 1516 aa14.21□□□□□ -0.13
VPS45-205ENST00000462852 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
VPS45-205ENST00000462852 ARHGEF11O15085 1522 aa14.19□□□□□ -0.14
VPS45-205ENST00000462852 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
VPS45-205ENST00000462852 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
VPS45-205ENST00000462852 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
VPS45-205ENST00000462852 TRPC6Q9Y210 931 aa14.15□□□□□ -0.14
VPS45-205ENST00000462852 EEA1Q15075 1411 aa14.14□□□□□ -0.15
VPS45-205ENST00000462852 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
VPS45-205ENST00000462852 KIF21BO75037 1637 aa14.13□□□□□ -0.15
VPS45-205ENST00000462852 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
VPS45-205ENST00000462852 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
VPS45-205ENST00000462852 PCDHB13Q9Y5F0 798 aa14.11□□□□□ -0.15
VPS45-205ENST00000462852 ATMINO43313 823 aaPredicted RBP14.1□□□□□ -0.15
VPS45-205ENST00000462852 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
VPS45-205ENST00000462852 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
VPS45-205ENST00000462852 SGIP1Q9BQI5 828 aa14.1□□□□□ -0.15
VPS45-205ENST00000462852 AQRO60306 1485 aaKnown RBP eCLIP14.08□□□□□ -0.167e-8■■■■□ 21.3
VPS45-205ENST00000462852 PYGBP11216 843 aa14.08□□□□□ -0.16
VPS45-205ENST00000462852 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
VPS45-205ENST00000462852 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
VPS45-205ENST00000462852 GSE1Q14687 1217 aa14.06□□□□□ -0.16
VPS45-205ENST00000462852 LHX8Q68G74 356 aa14.06□□□□□ -0.16
VPS45-205ENST00000462852 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
VPS45-205ENST00000462852 CUL7Q14999 1698 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms