RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
VPS45-205ENST00000462852 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
VPS45-205ENST00000462852 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
VPS45-205ENST00000462852 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
VPS45-205ENST00000462852 FOXD1Q16676 465 aa22.83■■□□□ 1.25
VPS45-205ENST00000462852 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
VPS45-205ENST00000462852 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
VPS45-205ENST00000462852 ADRA2BP18089 450 aa21.56■■□□□ 1.04
VPS45-205ENST00000462852 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
VPS45-205ENST00000462852 MSH5O43196 834 aa21.17■□□□□ 0.98
VPS45-205ENST00000462852 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
VPS45-205ENST00000462852 NISCHQ9Y2I1 1504 aa20.02■□□□□ 0.8
VPS45-205ENST00000462852 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
VPS45-205ENST00000462852 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
VPS45-205ENST00000462852 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
VPS45-205ENST00000462852 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
VPS45-205ENST00000462852 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
VPS45-205ENST00000462852 HOXD11P31277 338 aaPredicted RBP18.92■□□□□ 0.62
VPS45-205ENST00000462852 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
VPS45-205ENST00000462852 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
VPS45-205ENST00000462852 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
VPS45-205ENST00000462852 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
VPS45-205ENST00000462852 KCNA4P22459 653 aa18.62■□□□□ 0.57
VPS45-205ENST00000462852 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
VPS45-205ENST00000462852 RNF39Q9H2S5 420 aa18.14■□□□□ 0.49
VPS45-205ENST00000462852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.47
VPS45-205ENST00000462852 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
VPS45-205ENST00000462852 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
VPS45-205ENST00000462852 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
VPS45-205ENST00000462852 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
VPS45-205ENST00000462852 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
VPS45-205ENST00000462852 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
VPS45-205ENST00000462852 ABCC9O60706 1549 aa17.46■□□□□ 0.39
VPS45-205ENST00000462852 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
VPS45-205ENST00000462852 CAPN15O75808 1086 aa17.24■□□□□ 0.35
VPS45-205ENST00000462852 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
VPS45-205ENST00000462852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
VPS45-205ENST00000462852 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
VPS45-205ENST00000462852 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
VPS45-205ENST00000462852 ZBTB22O15209 634 aa17.16■□□□□ 0.34
VPS45-205ENST00000462852 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
VPS45-205ENST00000462852 APLP2Q06481 763 aa17.13■□□□□ 0.33
VPS45-205ENST00000462852 DSG3P32926 999 aa17.1■□□□□ 0.33
VPS45-205ENST00000462852 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
VPS45-205ENST00000462852 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
VPS45-205ENST00000462852 ABCB7O75027 752 aa16.9■□□□□ 0.3
VPS45-205ENST00000462852 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
VPS45-205ENST00000462852 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
VPS45-205ENST00000462852 POLA2Q14181 598 aa16.69■□□□□ 0.26
VPS45-205ENST00000462852 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
VPS45-205ENST00000462852 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
VPS45-205ENST00000462852 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
VPS45-205ENST00000462852 EHMT2Q96KQ7 1210 aa16.58■□□□□ 0.24
VPS45-205ENST00000462852 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.24
VPS45-205ENST00000462852 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
VPS45-205ENST00000462852 NACADO15069 1562 aa16.43■□□□□ 0.22
VPS45-205ENST00000462852 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
VPS45-205ENST00000462852 DCAF8L2P0C7V8 631 aa16.28■□□□□ 0.2
VPS45-205ENST00000462852 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
VPS45-205ENST00000462852 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
VPS45-205ENST00000462852 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
VPS45-205ENST00000462852 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
VPS45-205ENST00000462852 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
VPS45-205ENST00000462852 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
VPS45-205ENST00000462852 FBLN2P98095 1184 aa16.08■□□□□ 0.16
VPS45-205ENST00000462852 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
VPS45-205ENST00000462852 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
VPS45-205ENST00000462852 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
VPS45-205ENST00000462852 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
VPS45-205ENST00000462852 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
VPS45-205ENST00000462852 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
VPS45-205ENST00000462852 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
VPS45-205ENST00000462852 POTEHQ6S545 545 aa15.83■□□□□ 0.12
VPS45-205ENST00000462852 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
VPS45-205ENST00000462852 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
VPS45-205ENST00000462852 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
VPS45-205ENST00000462852 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
VPS45-205ENST00000462852 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
VPS45-205ENST00000462852 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
VPS45-205ENST00000462852 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
VPS45-205ENST00000462852 PIP4P2Q8N4L2 257 aa15.51■□□□□ 0.07
VPS45-205ENST00000462852 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
VPS45-205ENST00000462852 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
VPS45-205ENST00000462852 FXR2P51116 673 aaKnown RBP eCLIP15.47■□□□□ 0.07
VPS45-205ENST00000462852 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
VPS45-205ENST00000462852 BAZ1AQ9NRL2 1556 aaPredicted RBP15.47■□□□□ 0.07
VPS45-205ENST00000462852 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
VPS45-205ENST00000462852 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
VPS45-205ENST00000462852 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
VPS45-205ENST00000462852 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.05
VPS45-205ENST00000462852 WIZO95785 1651 aa15.35■□□□□ 0.05
VPS45-205ENST00000462852 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
VPS45-205ENST00000462852 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
VPS45-205ENST00000462852 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
VPS45-205ENST00000462852 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
VPS45-205ENST00000462852 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
VPS45-205ENST00000462852 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
VPS45-205ENST00000462852 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
VPS45-205ENST00000462852 PROM2Q8N271 834 aa15.18■□□□□ 0.02
VPS45-205ENST00000462852 CUX2O14529 1486 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms