RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
VPS36-202ENST00000462289 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
VPS36-202ENST00000462289 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
VPS36-202ENST00000462289 DCAF1Q9Y4B6 1507 aa11.79□□□□□ -0.52
VPS36-202ENST00000462289 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
VPS36-202ENST00000462289 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
VPS36-202ENST00000462289 NACADO15069 1562 aa11.76□□□□□ -0.53
VPS36-202ENST00000462289 RASEFQ8IZ41 740 aa11.76□□□□□ -0.53
VPS36-202ENST00000462289 LHX8Q68G74 356 aa11.75□□□□□ -0.53
VPS36-202ENST00000462289 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
VPS36-202ENST00000462289 NUBP1P53384 320 aa11.72□□□□□ -0.53
VPS36-202ENST00000462289 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.53
VPS36-202ENST00000462289 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
VPS36-202ENST00000462289 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
VPS36-202ENST00000462289 MAP3K13O43283 966 aa11.62□□□□□ -0.55
VPS36-202ENST00000462289 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
VPS36-202ENST00000462289 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
VPS36-202ENST00000462289 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
VPS36-202ENST00000462289 FAM212AQ96EL1 285 aa11.59□□□□□ -0.55
VPS36-202ENST00000462289 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
VPS36-202ENST00000462289 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
VPS36-202ENST00000462289 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
VPS36-202ENST00000462289 TIE1P35590 1138 aa11.54□□□□□ -0.56
VPS36-202ENST00000462289 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
VPS36-202ENST00000462289 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
VPS36-202ENST00000462289 SLC39A7Q92504 469 aa11.53□□□□□ -0.56
VPS36-202ENST00000462289 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
VPS36-202ENST00000462289 C7P10643 843 aa11.52□□□□□ -0.57
VPS36-202ENST00000462289 METRNQ9UJH8 293 aa11.51□□□□□ -0.57
VPS36-202ENST00000462289 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
VPS36-202ENST00000462289 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
VPS36-202ENST00000462289 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
VPS36-202ENST00000462289 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
VPS36-202ENST00000462289 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
VPS36-202ENST00000462289 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
VPS36-202ENST00000462289 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
VPS36-202ENST00000462289 OTUD5Q96G74 571 aa11.44□□□□□ -0.58
VPS36-202ENST00000462289 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
VPS36-202ENST00000462289 PYGBP11216 843 aa11.42□□□□□ -0.58
VPS36-202ENST00000462289 GSE1Q14687 1217 aa11.42□□□□□ -0.58
VPS36-202ENST00000462289 POTEFA5A3E0 1075 aa11.4□□□□□ -0.58
VPS36-202ENST00000462289 DCAF8L2P0C7V8 631 aa11.39□□□□□ -0.59
VPS36-202ENST00000462289 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
VPS36-202ENST00000462289 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
VPS36-202ENST00000462289 SHROOM4Q9ULL8 1493 aa11.38□□□□□ -0.59
VPS36-202ENST00000462289 CHRM1P11229 460 aaPredicted RBP11.36□□□□□ -0.59
VPS36-202ENST00000462289 IER5LQ5T953 404 aa11.36□□□□□ -0.59
VPS36-202ENST00000462289 SPOCK2Q92563 424 aa11.36□□□□□ -0.59
VPS36-202ENST00000462289 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
VPS36-202ENST00000462289 SCRIBQ14160 1630 aa11.33□□□□□ -0.6
VPS36-202ENST00000462289 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
VPS36-202ENST00000462289 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
VPS36-202ENST00000462289 PCDHB8Q9UN66 801 aa11.31□□□□□ -0.6
VPS36-202ENST00000462289 ZNF467Q7Z7K2 595 aaPredicted RBP11.29□□□□□ -0.6
VPS36-202ENST00000462289 SEC24BO95487 1268 aa11.28□□□□□ -0.6
VPS36-202ENST00000462289 IRX5P78411 483 aaPredicted RBP11.24□□□□□ -0.61
VPS36-202ENST00000462289 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
VPS36-202ENST00000462289 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
VPS36-202ENST00000462289 PLCG2P16885 1265 aa11.18□□□□□ -0.62
VPS36-202ENST00000462289 PSEN1P49768 467 aa11.17□□□□□ -0.62
VPS36-202ENST00000462289 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
VPS36-202ENST00000462289 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
VPS36-202ENST00000462289 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
VPS36-202ENST00000462289 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
VPS36-202ENST00000462289 GOLGA2Q08379 1002 aa11.09□□□□□ -0.63
VPS36-202ENST00000462289 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
VPS36-202ENST00000462289 ILDR1Q86SU0 546 aaPredicted RBP11.09□□□□□ -0.63
VPS36-202ENST00000462289 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
VPS36-202ENST00000462289 EIF4G1Q04637 1599 aaKnown RBP11.07□□□□□ -0.64
VPS36-202ENST00000462289 POTEMA6NI47 508 aa11.04□□□□□ -0.64
VPS36-202ENST00000462289 SLAIN1Q8ND83 568 aa11.02□□□□□ -0.65
VPS36-202ENST00000462289 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
VPS36-202ENST00000462289 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
VPS36-202ENST00000462289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.02□□□□□ -0.656e-7■□□□□ 8.1
VPS36-202ENST00000462289 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
VPS36-202ENST00000462289 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
VPS36-202ENST00000462289 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
VPS36-202ENST00000462289 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
VPS36-202ENST00000462289 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
VPS36-202ENST00000462289 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
VPS36-202ENST00000462289 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
VPS36-202ENST00000462289 CECR2Q9BXF3 1484 aa10.94□□□□□ -0.66
VPS36-202ENST00000462289 VGFO15240 615 aaPredicted RBP10.94□□□□□ -0.66
VPS36-202ENST00000462289 PEG3Q9GZU2 1588 aa10.94□□□□□ -0.66
VPS36-202ENST00000462289 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
VPS36-202ENST00000462289 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
VPS36-202ENST00000462289 EFCAB3Q8N7B9 438 aa10.92□□□□□ -0.66
VPS36-202ENST00000462289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.91□□□□□ -0.66
VPS36-202ENST00000462289 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
VPS36-202ENST00000462289 ZFP91Q96JP5 570 aaPredicted RBP10.91□□□□□ -0.66
VPS36-202ENST00000462289 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
VPS36-202ENST00000462289 ST18O60284 1047 aa10.88□□□□□ -0.67
VPS36-202ENST00000462289 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
VPS36-202ENST00000462289 SNPHO15079 494 aa10.86□□□□□ -0.67
VPS36-202ENST00000462289 SOX12O15370 315 aa10.86□□□□□ -0.67
VPS36-202ENST00000462289 TMEM121BQ9BXQ6 578 aaPredicted RBP10.86□□□□□ -0.67
VPS36-202ENST00000462289 NCAPD3P42695 1498 aa10.86□□□□□ -0.67
VPS36-202ENST00000462289 PKD2Q13563 968 aa10.85□□□□□ -0.67
VPS36-202ENST00000462289 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
VPS36-202ENST00000462289 MROH2BQ7Z745 1585 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms