RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 LHX8Q68G74 356 aa14.46□□□□□ -0.09
THUMPD3-207ENST00000461636 RASEFQ8IZ41 740 aa14.45□□□□□ -0.1
THUMPD3-207ENST00000461636 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
THUMPD3-207ENST00000461636 KIF12Q96FN5 646 aa14.37□□□□□ -0.11
THUMPD3-207ENST00000461636 NUBP1P53384 320 aa14.36□□□□□ -0.11
THUMPD3-207ENST00000461636 FAM212AQ96EL1 285 aa14.35□□□□□ -0.11
THUMPD3-207ENST00000461636 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
THUMPD3-207ENST00000461636 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
THUMPD3-207ENST00000461636 MAP3K13O43283 966 aa14.29□□□□□ -0.12
THUMPD3-207ENST00000461636 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
THUMPD3-207ENST00000461636 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
THUMPD3-207ENST00000461636 SGIP1Q9BQI5 828 aa14.23□□□□□ -0.13
THUMPD3-207ENST00000461636 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
THUMPD3-207ENST00000461636 SLC39A7Q92504 469 aa14.22□□□□□ -0.13
THUMPD3-207ENST00000461636 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
THUMPD3-207ENST00000461636 TIE1P35590 1138 aa14.2□□□□□ -0.14
THUMPD3-207ENST00000461636 C7P10643 843 aa14.19□□□□□ -0.14
THUMPD3-207ENST00000461636 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
THUMPD3-207ENST00000461636 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
THUMPD3-207ENST00000461636 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
THUMPD3-207ENST00000461636 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
THUMPD3-207ENST00000461636 TRPC6Q9Y210 931 aa14.16□□□□□ -0.14
THUMPD3-207ENST00000461636 GSE1Q14687 1217 aa14.11□□□□□ -0.15
THUMPD3-207ENST00000461636 TTLL13PA6NNM8 815 aa14.1□□□□□ -0.15
THUMPD3-207ENST00000461636 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
THUMPD3-207ENST00000461636 PYGBP11216 843 aa14.08□□□□□ -0.16
THUMPD3-207ENST00000461636 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
THUMPD3-207ENST00000461636 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
THUMPD3-207ENST00000461636 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
THUMPD3-207ENST00000461636 OTUD5Q96G74 571 aa14.02□□□□□ -0.17
THUMPD3-207ENST00000461636 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.17
THUMPD3-207ENST00000461636 TMEM106CQ9BVX2 250 aa14.01□□□□□ -0.17
THUMPD3-207ENST00000461636 IER5LQ5T953 404 aa13.99□□□□□ -0.17
THUMPD3-207ENST00000461636 MAMSTRQ6ZN01 415 aa13.99□□□□□ -0.17
THUMPD3-207ENST00000461636 SEC24BO95487 1268 aa13.98□□□□□ -0.17
THUMPD3-207ENST00000461636 ZNF467Q7Z7K2 595 aaPredicted RBP13.95□□□□□ -0.18
THUMPD3-207ENST00000461636 PCDHB8Q9UN66 801 aa13.93□□□□□ -0.18
THUMPD3-207ENST00000461636 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
THUMPD3-207ENST00000461636 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
THUMPD3-207ENST00000461636 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
THUMPD3-207ENST00000461636 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
THUMPD3-207ENST00000461636 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
THUMPD3-207ENST00000461636 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
THUMPD3-207ENST00000461636 PLCG2P16885 1265 aa13.85□□□□□ -0.19
THUMPD3-207ENST00000461636 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
THUMPD3-207ENST00000461636 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
THUMPD3-207ENST00000461636 PSEN1P49768 467 aa13.78□□□□□ -0.2
THUMPD3-207ENST00000461636 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
THUMPD3-207ENST00000461636 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
THUMPD3-207ENST00000461636 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
THUMPD3-207ENST00000461636 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
THUMPD3-207ENST00000461636 SLAIN1Q8ND83 568 aa13.62□□□□□ -0.23
THUMPD3-207ENST00000461636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.233e-6■■□□□ 13.5
THUMPD3-207ENST00000461636 PDCD7Q8N8D1 485 aaKnown RBP13.61□□□□□ -0.23
THUMPD3-207ENST00000461636 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
THUMPD3-207ENST00000461636 POTEMA6NI47 508 aa13.6□□□□□ -0.23
THUMPD3-207ENST00000461636 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
THUMPD3-207ENST00000461636 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
THUMPD3-207ENST00000461636 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-207ENST00000461636 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
THUMPD3-207ENST00000461636 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
THUMPD3-207ENST00000461636 C3orf67Q6ZVT6 689 aa13.54□□□□□ -0.24
THUMPD3-207ENST00000461636 ILDR1Q86SU0 546 aaPredicted RBP13.51□□□□□ -0.25
THUMPD3-207ENST00000461636 VGFO15240 615 aaPredicted RBP13.49□□□□□ -0.25
THUMPD3-207ENST00000461636 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
THUMPD3-207ENST00000461636 G3V3G9 751 aa13.48□□□□□ -0.25
THUMPD3-207ENST00000461636 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
THUMPD3-207ENST00000461636 TAOK2Q9UL54 1235 aa13.47□□□□□ -0.25
THUMPD3-207ENST00000461636 SNPHO15079 494 aa13.45□□□□□ -0.26
THUMPD3-207ENST00000461636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
THUMPD3-207ENST00000461636 EFCAB3Q8N7B9 438 aa13.44□□□□□ -0.26
THUMPD3-207ENST00000461636 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
THUMPD3-207ENST00000461636 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
THUMPD3-207ENST00000461636 DPY19L2Q6NUT2 758 aa13.41□□□□□ -0.26
THUMPD3-207ENST00000461636 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
THUMPD3-207ENST00000461636 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
THUMPD3-207ENST00000461636 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
THUMPD3-207ENST00000461636 ST18O60284 1047 aa13.37□□□□□ -0.27
THUMPD3-207ENST00000461636 SOX12O15370 315 aa13.36□□□□□ -0.27
THUMPD3-207ENST00000461636 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
THUMPD3-207ENST00000461636 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-207ENST00000461636 PKD2Q13563 968 aa13.29□□□□□ -0.28
THUMPD3-207ENST00000461636 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
THUMPD3-207ENST00000461636 STK25O00506 426 aa13.27□□□□□ -0.29
THUMPD3-207ENST00000461636 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.29
THUMPD3-207ENST00000461636 NLRP6P59044 892 aa13.24□□□□□ -0.29
THUMPD3-207ENST00000461636 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
THUMPD3-207ENST00000461636 RGL2O15211 777 aa13.23□□□□□ -0.29
THUMPD3-207ENST00000461636 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
THUMPD3-207ENST00000461636 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
THUMPD3-207ENST00000461636 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
THUMPD3-207ENST00000461636 EMP3P54852 163 aa13.16□□□□□ -0.3
THUMPD3-207ENST00000461636 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
THUMPD3-207ENST00000461636 FBXO22Q8NEZ5 403 aa13.15□□□□□ -0.3
THUMPD3-207ENST00000461636 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
THUMPD3-207ENST00000461636 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
THUMPD3-207ENST00000461636 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
THUMPD3-207ENST00000461636 NISCHQ9Y2I1 1504 aa13.12□□□□□ -0.31
THUMPD3-207ENST00000461636 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
THUMPD3-207ENST00000461636 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms