RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 AEBP2Q6ZN18 517 aaPredicted RBP29.11■■■□□ 2.25
THUMPD3-207ENST00000461636 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.06
THUMPD3-207ENST00000461636 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
THUMPD3-207ENST00000461636 PHF23Q9BUL5 403 aaPredicted RBP24.57■■□□□ 1.52
THUMPD3-207ENST00000461636 FOXD1Q16676 465 aa23.13■■□□□ 1.29
THUMPD3-207ENST00000461636 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
THUMPD3-207ENST00000461636 PIAS4Q8N2W9 510 aaPredicted RBP21.73■■□□□ 1.07
THUMPD3-207ENST00000461636 PPP6R1Q9UPN7 881 aa21.71■■□□□ 1.07
THUMPD3-207ENST00000461636 MSH5O43196 834 aa21.69■■□□□ 1.06
THUMPD3-207ENST00000461636 ADRA2BP18089 450 aa21.68■■□□□ 1.06
THUMPD3-207ENST00000461636 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
THUMPD3-207ENST00000461636 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
THUMPD3-207ENST00000461636 MAPK8IP2Q13387 824 aaPredicted RBP19.84■□□□□ 0.77
THUMPD3-207ENST00000461636 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
THUMPD3-207ENST00000461636 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
THUMPD3-207ENST00000461636 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
THUMPD3-207ENST00000461636 HOXD11P31277 338 aaPredicted RBP19.1■□□□□ 0.65
THUMPD3-207ENST00000461636 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
THUMPD3-207ENST00000461636 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
THUMPD3-207ENST00000461636 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
THUMPD3-207ENST00000461636 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
THUMPD3-207ENST00000461636 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
THUMPD3-207ENST00000461636 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
THUMPD3-207ENST00000461636 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
THUMPD3-207ENST00000461636 KCNA4P22459 653 aa18.42■□□□□ 0.54
THUMPD3-207ENST00000461636 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
THUMPD3-207ENST00000461636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
THUMPD3-207ENST00000461636 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
THUMPD3-207ENST00000461636 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
THUMPD3-207ENST00000461636 CAPN15O75808 1086 aa17.53■□□□□ 0.4
THUMPD3-207ENST00000461636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
THUMPD3-207ENST00000461636 APLP2Q06481 763 aa17.5■□□□□ 0.39
THUMPD3-207ENST00000461636 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
THUMPD3-207ENST00000461636 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
THUMPD3-207ENST00000461636 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
THUMPD3-207ENST00000461636 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
THUMPD3-207ENST00000461636 DSG3P32926 999 aa17.33■□□□□ 0.36
THUMPD3-207ENST00000461636 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
THUMPD3-207ENST00000461636 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
THUMPD3-207ENST00000461636 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
THUMPD3-207ENST00000461636 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
THUMPD3-207ENST00000461636 ABCB7O75027 752 aa17.1■□□□□ 0.33
THUMPD3-207ENST00000461636 ZBTB22O15209 634 aa16.9■□□□□ 0.3
THUMPD3-207ENST00000461636 POLA2Q14181 598 aa16.83■□□□□ 0.28
THUMPD3-207ENST00000461636 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
THUMPD3-207ENST00000461636 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
THUMPD3-207ENST00000461636 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
THUMPD3-207ENST00000461636 ZBTB12Q9Y330 459 aaPredicted RBP16.62■□□□□ 0.25
THUMPD3-207ENST00000461636 POTEHQ6S545 545 aa16.36■□□□□ 0.21
THUMPD3-207ENST00000461636 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
THUMPD3-207ENST00000461636 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
THUMPD3-207ENST00000461636 FBLN2P98095 1184 aa16.26■□□□□ 0.19
THUMPD3-207ENST00000461636 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
THUMPD3-207ENST00000461636 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
THUMPD3-207ENST00000461636 CHRDL2Q6WN34 429 aa16.14■□□□□ 0.17
THUMPD3-207ENST00000461636 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
THUMPD3-207ENST00000461636 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
THUMPD3-207ENST00000461636 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
THUMPD3-207ENST00000461636 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
THUMPD3-207ENST00000461636 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
THUMPD3-207ENST00000461636 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
THUMPD3-207ENST00000461636 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
THUMPD3-207ENST00000461636 SSUH2Q9Y2M2 353 aa15.83■□□□□ 0.12
THUMPD3-207ENST00000461636 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
THUMPD3-207ENST00000461636 SPDYE1Q8NFV5 336 aaPredicted RBP15.75■□□□□ 0.11
THUMPD3-207ENST00000461636 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
THUMPD3-207ENST00000461636 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
THUMPD3-207ENST00000461636 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
THUMPD3-207ENST00000461636 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
THUMPD3-207ENST00000461636 HAX1O00165 279 aa15.47■□□□□ 0.07
THUMPD3-207ENST00000461636 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
THUMPD3-207ENST00000461636 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
THUMPD3-207ENST00000461636 SP7Q8TDD2 431 aaPredicted RBP15.42■□□□□ 0.06
THUMPD3-207ENST00000461636 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
THUMPD3-207ENST00000461636 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
THUMPD3-207ENST00000461636 C19orf67A6NJJ6 358 aa15.2■□□□□ 0.02
THUMPD3-207ENST00000461636 EVX2Q03828 476 aa15.17■□□□□ 0.02
THUMPD3-207ENST00000461636 FARP1Q9Y4F1 1045 aaPredicted RBP15.14■□□□□ 0.01
THUMPD3-207ENST00000461636 CREBZFQ9NS37 354 aa15.06■□□□□ 0
THUMPD3-207ENST00000461636 PROM2Q8N271 834 aa15.05■□□□□ -0
THUMPD3-207ENST00000461636 CD44P16070 742 aaKnown RBP15.03■□□□□ -0
THUMPD3-207ENST00000461636 GABBR2O75899 941 aa14.92□□□□□ -0.02
THUMPD3-207ENST00000461636 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
THUMPD3-207ENST00000461636 CLCN6P51797 869 aa14.86□□□□□ -0.03
THUMPD3-207ENST00000461636 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
THUMPD3-207ENST00000461636 FKBP8Q14318 412 aa14.83□□□□□ -0.04
THUMPD3-207ENST00000461636 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
THUMPD3-207ENST00000461636 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
THUMPD3-207ENST00000461636 ZNF579Q8NAF0 562 aaKnown RBP14.8□□□□□ -0.04
THUMPD3-207ENST00000461636 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
THUMPD3-207ENST00000461636 MIER1Q8N108 512 aa14.71□□□□□ -0.05
THUMPD3-207ENST00000461636 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
THUMPD3-207ENST00000461636 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
THUMPD3-207ENST00000461636 PHF12Q96QT6 1004 aa14.61□□□□□ -0.07
THUMPD3-207ENST00000461636 ZBTB47Q9UFB7 747 aaPredicted RBP14.58□□□□□ -0.08
THUMPD3-207ENST00000461636 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
THUMPD3-207ENST00000461636 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
THUMPD3-207ENST00000461636 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
THUMPD3-207ENST00000461636 FBXO3Q9UK99 471 aa14.55□□□□□ -0.08
THUMPD3-207ENST00000461636 CCDC61Q9Y6R9 512 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms