RNA–Protein interactions for RNA: ENST00000461280.1

KCNH2-204, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

TSL 1 (best)

Gene KCNH2, Length 2,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-204ENST00000461280 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
KCNH2-204ENST00000461280 PHLDB1Q86UU1 1377 aa28.22■■■□□ 2.11
KCNH2-204ENST00000461280 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
KCNH2-204ENST00000461280 FHAD1B1AJZ9 1412 aa28.16■■■□□ 2.1
KCNH2-204ENST00000461280 MAPKBP1O60336 1514 aa28.16■■■□□ 2.1
KCNH2-204ENST00000461280 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
KCNH2-204ENST00000461280 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.09
KCNH2-204ENST00000461280 NESP48681 1621 aa28.13■■■□□ 2.09
KCNH2-204ENST00000461280 DNAJC5BQ9UF47 199 aa28.13■■■□□ 2.09
KCNH2-204ENST00000461280 ATP1B4Q9UN42 357 aaPredicted RBP28.13■■■□□ 2.09
KCNH2-204ENST00000461280 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
KCNH2-204ENST00000461280 TOPBP1Q92547 1522 aa28.12■■■□□ 2.09
KCNH2-204ENST00000461280 ABCA10Q8WWZ4 1543 aa28.12■■■□□ 2.09
KCNH2-204ENST00000461280 FAM50AQ14320 339 aaKnown RBP28.11■■■□□ 2.09
KCNH2-204ENST00000461280 CFAP43Q8NDM7 1665 aa28.11■■■□□ 2.09
KCNH2-204ENST00000461280 SETD5Q9C0A6 1442 aa28.1■■■□□ 2.09
KCNH2-204ENST00000461280 FYCO1Q9BQS8 1478 aa27.98■■■□□ 2.07
KCNH2-204ENST00000461280 EFCAB5A4FU69 1503 aa27.97■■■□□ 2.07
KCNH2-204ENST00000461280 SIN3AQ96ST3 1273 aa27.97■■■□□ 2.07
KCNH2-204ENST00000461280 CASKIN1Q8WXD9 1431 aa27.96■■■□□ 2.07
KCNH2-204ENST00000461280 CUL7Q14999 1698 aa27.96■■■□□ 2.07
KCNH2-204ENST00000461280 CTTNBP2Q8WZ74 1663 aa27.93■■■□□ 2.06
KCNH2-204ENST00000461280 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
KCNH2-204ENST00000461280 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.063e-7■■■■■ 30.2
KCNH2-204ENST00000461280 WDR97A6NE52 1622 aa27.88■■■□□ 2.05
KCNH2-204ENST00000461280 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
KCNH2-204ENST00000461280 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
KCNH2-204ENST00000461280 FMN1Q68DA7 1419 aa27.82■■■□□ 2.04
KCNH2-204ENST00000461280 KCNH8Q96L42 1107 aa27.81■■■□□ 2.04
KCNH2-204ENST00000461280 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
KCNH2-204ENST00000461280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.79■■■□□ 2.041e-6■■■□□ 18.7
KCNH2-204ENST00000461280 FGD6Q6ZV73 1430 aa27.79■■■□□ 2.04
KCNH2-204ENST00000461280 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
KCNH2-204ENST00000461280 MTUS2Q5JR59 1369 aa27.75■■■□□ 2.03
KCNH2-204ENST00000461280 GAPVD1Q14C86 1478 aa27.74■■■□□ 2.03
KCNH2-204ENST00000461280 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
KCNH2-204ENST00000461280 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
KCNH2-204ENST00000461280 DDX10Q13206 875 aaKnown RBP27.71■■■□□ 2.03
KCNH2-204ENST00000461280 PTPRKQ15262 1439 aa27.71■■■□□ 2.03
KCNH2-204ENST00000461280 SUPT16HQ9Y5B9 1047 aaKnown RBP27.69■■■□□ 2.02
KCNH2-204ENST00000461280 HIRIP3Q9BW71 556 aaPredicted RBP27.68■■■□□ 2.02
KCNH2-204ENST00000461280 TIMELESSQ9UNS1 1208 aa27.67■■■□□ 2.02
KCNH2-204ENST00000461280 PPP1R15AO75807 674 aaPredicted RBP27.67■■■□□ 2.02
KCNH2-204ENST00000461280 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
KCNH2-204ENST00000461280 CCDC18Q5T9S5 1454 aa27.65■■■□□ 2.02
KCNH2-204ENST00000461280 NCOA2Q15596 1464 aa27.64■■■□□ 2.01
KCNH2-204ENST00000461280 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
KCNH2-204ENST00000461280 HFM1A2PYH4 1435 aa27.61■■■□□ 2.01
KCNH2-204ENST00000461280 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
KCNH2-204ENST00000461280 MYOM3Q5VTT5 1437 aa27.59■■■□□ 2.01
KCNH2-204ENST00000461280 PTPN23Q9H3S7 1636 aa27.59■■■□□ 2.01
KCNH2-204ENST00000461280 UACAQ9BZF9 1416 aa27.55■■■□□ 2
KCNH2-204ENST00000461280 NAIPQ13075 1403 aa27.55■■■□□ 2
KCNH2-204ENST00000461280 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
KCNH2-204ENST00000461280 SUPT6HQ7KZ85 1726 aaKnown RBP27.53■■■□□ 2
KCNH2-204ENST00000461280 TARBP1Q13395 1621 aaKnown RBP27.53■■■□□ 2
KCNH2-204ENST00000461280 TONSLQ96HA7 1378 aa27.53■■■□□ 2
KCNH2-204ENST00000461280 MAGI3Q5TCQ9 1506 aa27.53■■■□□ 2
KCNH2-204ENST00000461280 EHBP1L1Q8N3D4 1523 aa27.53■■■□□ 2
KCNH2-204ENST00000461280 UGGT2Q9NYU1 1516 aa27.48■■□□□ 1.99
KCNH2-204ENST00000461280 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
KCNH2-204ENST00000461280 RRP7BPQ9NSQ0 103 aa27.42■■□□□ 1.98
KCNH2-204ENST00000461280 CHIC2Q9UKJ5 165 aa27.41■■□□□ 1.98
KCNH2-204ENST00000461280 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
KCNH2-204ENST00000461280 KDM5BQ9UGL1 1544 aa27.37■■□□□ 1.97
KCNH2-204ENST00000461280 ARID3CA6NKF2 412 aa27.37■■□□□ 1.97
KCNH2-204ENST00000461280 IQGAP2Q13576 1575 aa27.36■■□□□ 1.97
KCNH2-204ENST00000461280 HECW1Q76N89 1606 aa27.36■■□□□ 1.97
KCNH2-204ENST00000461280 ANP32CO43423 234 aa27.36■■□□□ 1.97
KCNH2-204ENST00000461280 EPRSP07814 1512 aaKnown RBP27.35■■□□□ 1.97
KCNH2-204ENST00000461280 TCOF1Q13428 1488 aaKnown RBP27.35■■□□□ 1.97
KCNH2-204ENST00000461280 CDK13Q14004 1512 aaKnown RBP27.34■■□□□ 1.97
KCNH2-204ENST00000461280 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
KCNH2-204ENST00000461280 CCER2I3L3R5 266 aa27.32■■□□□ 1.96
KCNH2-204ENST00000461280 DENND4BO75064 1496 aaPredicted RBP27.31■■□□□ 1.96
KCNH2-204ENST00000461280 KDM6BO15054 1643 aa27.3■■□□□ 1.96
KCNH2-204ENST00000461280 TRIM52Q96A61 297 aa27.28■■□□□ 1.96
KCNH2-204ENST00000461280 GCC2Q8IWJ2 1684 aa27.27■■□□□ 1.96
KCNH2-204ENST00000461280 BCANQ96GW7 911 aa27.27■■□□□ 1.96
KCNH2-204ENST00000461280 WDR62O43379 1518 aa27.26■■□□□ 1.95
KCNH2-204ENST00000461280 FKBP8Q14318 412 aa27.23■■□□□ 1.95
KCNH2-204ENST00000461280 TSHZ2Q9NRE2 1034 aa27.22■■□□□ 1.95
KCNH2-204ENST00000461280 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
KCNH2-204ENST00000461280 AKNAQ7Z591 1439 aa27.2■■□□□ 1.94
KCNH2-204ENST00000461280 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
KCNH2-204ENST00000461280 MIA2Q96PC5 1412 aa27.2■■□□□ 1.94
KCNH2-204ENST00000461280 FOXD1Q16676 465 aa27.17■■□□□ 1.94
KCNH2-204ENST00000461280 MPHOSPH9Q99550 1183 aa27.17■■□□□ 1.94
KCNH2-204ENST00000461280 HSPA5P11021 654 aaKnown RBP27.15■■□□□ 1.94
KCNH2-204ENST00000461280 WASHC2AQ641Q2 1341 aa27.12■■□□□ 1.93
KCNH2-204ENST00000461280 DISP1Q96F81 1524 aa27.1■■□□□ 1.93
KCNH2-204ENST00000461280 ZNF644Q9H582 1327 aaPredicted RBP27.09■■□□□ 1.93
KCNH2-204ENST00000461280 L3MBTL2Q969R5 705 aa27.08■■□□□ 1.93
KCNH2-204ENST00000461280 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
KCNH2-204ENST00000461280 DAPK1P53355 1430 aa27.08■■□□□ 1.93
KCNH2-204ENST00000461280 MYT1Q01538 1121 aa27.08■■□□□ 1.93
KCNH2-204ENST00000461280 IFT140Q96RY7 1462 aa27.07■■□□□ 1.92
KCNH2-204ENST00000461280 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
KCNH2-204ENST00000461280 KIAA0586Q9BVV6 1533 aa27.06■■□□□ 1.92
KCNH2-204ENST00000461280 ABCC5O15440 1437 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms