RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.46
CDKN3-205ENST00000458126 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
CDKN3-205ENST00000458126 DISP3Q9P2K9 1392 aa12.14□□□□□ -0.47
CDKN3-205ENST00000458126 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
CDKN3-205ENST00000458126 PROM2Q8N271 834 aa12.1□□□□□ -0.47
CDKN3-205ENST00000458126 KDM4FA0A1W2PPD8 638 aa12.08□□□□□ -0.48
CDKN3-205ENST00000458126 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
CDKN3-205ENST00000458126 EVX2Q03828 476 aa12.04□□□□□ -0.48
CDKN3-205ENST00000458126 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
CDKN3-205ENST00000458126 NESP48681 1621 aa12.03□□□□□ -0.48
CDKN3-205ENST00000458126 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
CDKN3-205ENST00000458126 ARAP1Q96P48 1450 aa12.02□□□□□ -0.49
CDKN3-205ENST00000458126 CREBZFQ9NS37 354 aa12□□□□□ -0.49
CDKN3-205ENST00000458126 HECW2Q9P2P5 1572 aa11.96□□□□□ -0.5
CDKN3-205ENST00000458126 SMARCA2P51531 1590 aa11.95□□□□□ -0.5
CDKN3-205ENST00000458126 MYO15BQ96JP2 1530 aa11.93□□□□□ -0.5
CDKN3-205ENST00000458126 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
CDKN3-205ENST00000458126 FKBP8Q14318 412 aa11.86□□□□□ -0.51
CDKN3-205ENST00000458126 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDKN3-205ENST00000458126 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
CDKN3-205ENST00000458126 CLCN6P51797 869 aa11.84□□□□□ -0.51
CDKN3-205ENST00000458126 GABBR2O75899 941 aa11.83□□□□□ -0.52
CDKN3-205ENST00000458126 SPATA31D1Q6ZQQ2 1576 aa11.83□□□□□ -0.52
CDKN3-205ENST00000458126 SYNJ2O15056 1496 aa11.8□□□□□ -0.52
CDKN3-205ENST00000458126 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
CDKN3-205ENST00000458126 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
CDKN3-205ENST00000458126 ZRANB1Q9UGI0 708 aa11.76□□□□□ -0.53
CDKN3-205ENST00000458126 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
CDKN3-205ENST00000458126 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
CDKN3-205ENST00000458126 WDR62O43379 1518 aa11.74□□□□□ -0.53
CDKN3-205ENST00000458126 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
CDKN3-205ENST00000458126 MIER1Q8N108 512 aa11.73□□□□□ -0.53
CDKN3-205ENST00000458126 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
CDKN3-205ENST00000458126 LAMC3Q9Y6N6 1575 aa11.69□□□□□ -0.54
CDKN3-205ENST00000458126 MRC2Q9UBG0 1479 aa11.69□□□□□ -0.54
CDKN3-205ENST00000458126 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
CDKN3-205ENST00000458126 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
CDKN3-205ENST00000458126 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
CDKN3-205ENST00000458126 PLCD3Q8N3E9 789 aa11.65□□□□□ -0.54
CDKN3-205ENST00000458126 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
CDKN3-205ENST00000458126 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
CDKN3-205ENST00000458126 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
CDKN3-205ENST00000458126 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
CDKN3-205ENST00000458126 DCBLD2Q96PD2 775 aa11.55□□□□□ -0.56
CDKN3-205ENST00000458126 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
CDKN3-205ENST00000458126 ADGRL1O94910 1474 aa11.54□□□□□ -0.56
CDKN3-205ENST00000458126 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
CDKN3-205ENST00000458126 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
CDKN3-205ENST00000458126 NUBP1P53384 320 aa11.49□□□□□ -0.57
CDKN3-205ENST00000458126 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
CDKN3-205ENST00000458126 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
CDKN3-205ENST00000458126 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
CDKN3-205ENST00000458126 HMGXB3Q12766 1538 aa11.44□□□□□ -0.58
CDKN3-205ENST00000458126 LHX8Q68G74 356 aa11.42□□□□□ -0.58
CDKN3-205ENST00000458126 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
CDKN3-205ENST00000458126 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
CDKN3-205ENST00000458126 ATAD2BQ9ULI0 1458 aa11.39□□□□□ -0.59
CDKN3-205ENST00000458126 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
CDKN3-205ENST00000458126 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
CDKN3-205ENST00000458126 KDM6BO15054 1643 aa11.38□□□□□ -0.59
CDKN3-205ENST00000458126 MAP3K13O43283 966 aa11.37□□□□□ -0.59
CDKN3-205ENST00000458126 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
CDKN3-205ENST00000458126 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
CDKN3-205ENST00000458126 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
CDKN3-205ENST00000458126 CHD1O14646 1710 aa11.32□□□□□ -0.6
CDKN3-205ENST00000458126 DCAF8Q5TAQ9 597 aa11.31□□□□□ -0.6
CDKN3-205ENST00000458126 TIE1P35590 1138 aa11.3□□□□□ -0.6
CDKN3-205ENST00000458126 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
CDKN3-205ENST00000458126 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
CDKN3-205ENST00000458126 C7P10643 843 aa11.28□□□□□ -0.6
CDKN3-205ENST00000458126 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
CDKN3-205ENST00000458126 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.61
CDKN3-205ENST00000458126 GSE1Q14687 1217 aa11.27□□□□□ -0.61
CDKN3-205ENST00000458126 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
CDKN3-205ENST00000458126 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
CDKN3-205ENST00000458126 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
CDKN3-205ENST00000458126 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
CDKN3-205ENST00000458126 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
CDKN3-205ENST00000458126 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
CDKN3-205ENST00000458126 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
CDKN3-205ENST00000458126 CADPSQ9ULU8 1353 aa11.24□□□□□ -0.61
CDKN3-205ENST00000458126 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
CDKN3-205ENST00000458126 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
CDKN3-205ENST00000458126 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
CDKN3-205ENST00000458126 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
CDKN3-205ENST00000458126 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.61
CDKN3-205ENST00000458126 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
CDKN3-205ENST00000458126 PYGBP11216 843 aa11.2□□□□□ -0.62
CDKN3-205ENST00000458126 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
CDKN3-205ENST00000458126 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
CDKN3-205ENST00000458126 FAM69CQ0P6D2 419 aa11.15□□□□□ -0.62
CDKN3-205ENST00000458126 BAZ1BQ9UIG0 1483 aaKnown RBP11.14□□□□□ -0.63
CDKN3-205ENST00000458126 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
CDKN3-205ENST00000458126 IER5LQ5T953 404 aa11.13□□□□□ -0.63
CDKN3-205ENST00000458126 TMEM106CQ9BVX2 250 aa11.13□□□□□ -0.63
CDKN3-205ENST00000458126 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
CDKN3-205ENST00000458126 ZNF467Q7Z7K2 595 aaPredicted RBP11.12□□□□□ -0.63
CDKN3-205ENST00000458126 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
CDKN3-205ENST00000458126 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
CDKN3-205ENST00000458126 TOP2BQ02880 1626 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms