RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
HMGB3P30-201ENST00000457863 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
HMGB3P30-201ENST00000457863 NUBP1P53384 320 aa9.01□□□□□ -0.97
HMGB3P30-201ENST00000457863 LHX8Q68G74 356 aa9□□□□□ -0.97
HMGB3P30-201ENST00000457863 KIF12Q96FN5 646 aa8.99□□□□□ -0.97
HMGB3P30-201ENST00000457863 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.98
HMGB3P30-201ENST00000457863 ASTLQ6HA08 431 aaPredicted RBP8.96□□□□□ -0.98
HMGB3P30-201ENST00000457863 FAM212AQ96EL1 285 aa8.95□□□□□ -0.98
HMGB3P30-201ENST00000457863 MAP3K13O43283 966 aa8.92□□□□□ -0.98
HMGB3P30-201ENST00000457863 ATMINO43313 823 aaPredicted RBP8.92□□□□□ -0.98
HMGB3P30-201ENST00000457863 SGIP1Q9BQI5 828 aa8.92□□□□□ -0.98
HMGB3P30-201ENST00000457863 PELP1Q8IZL8 1130 aaKnown RBP8.89□□□□□ -0.99
HMGB3P30-201ENST00000457863 TIE1P35590 1138 aa8.88□□□□□ -0.99
HMGB3P30-201ENST00000457863 BMP2KQ9NSY1 1161 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P30-201ENST00000457863 SLC39A7Q92504 469 aa8.86□□□□□ -0.99
HMGB3P30-201ENST00000457863 TRPC6Q9Y210 931 aa8.86□□□□□ -0.99
HMGB3P30-201ENST00000457863 C7P10643 843 aa8.85□□□□□ -0.99
HMGB3P30-201ENST00000457863 ATN1P54259 1190 aaPredicted RBP8.85□□□□□ -0.99
HMGB3P30-201ENST00000457863 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
HMGB3P30-201ENST00000457863 PCDHB13Q9Y5F0 798 aa8.85□□□□□ -0.99
HMGB3P30-201ENST00000457863 KLHL34Q8N239 644 aa8.83□□□□□ -1
HMGB3P30-201ENST00000457863 TTLL13PA6NNM8 815 aa8.82□□□□□ -1
HMGB3P30-201ENST00000457863 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
HMGB3P30-201ENST00000457863 IFNL1Q8IU54 200 aa8.81□□□□□ -1
HMGB3P30-201ENST00000457863 POTEB2H3BUK9 544 aa8.8□□□□□ -1
HMGB3P30-201ENST00000457863 GSE1Q14687 1217 aa8.8□□□□□ -1
HMGB3P30-201ENST00000457863 IFNLR1Q8IU57 520 aaPredicted RBP8.79□□□□□ -1
HMGB3P30-201ENST00000457863 PYGBP11216 843 aa8.77□□□□□ -1.01
HMGB3P30-201ENST00000457863 IER5LQ5T953 404 aa8.76□□□□□ -1.01
HMGB3P30-201ENST00000457863 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
HMGB3P30-201ENST00000457863 OTUD5Q96G74 571 aa8.76□□□□□ -1.01
HMGB3P30-201ENST00000457863 TRIM35Q9UPQ4 493 aa8.75□□□□□ -1.01
HMGB3P30-201ENST00000457863 POTEFA5A3E0 1075 aa8.73□□□□□ -1.01
HMGB3P30-201ENST00000457863 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
HMGB3P30-201ENST00000457863 TMEM106CQ9BVX2 250 aa8.72□□□□□ -1.01
HMGB3P30-201ENST00000457863 POTEJP0CG39 1038 aa8.71□□□□□ -1.02
HMGB3P30-201ENST00000457863 ZNF467Q7Z7K2 595 aaPredicted RBP8.71□□□□□ -1.02
HMGB3P30-201ENST00000457863 MAMSTRQ6ZN01 415 aa8.7□□□□□ -1.02
HMGB3P30-201ENST00000457863 PCDHB8Q9UN66 801 aa8.69□□□□□ -1.02
HMGB3P30-201ENST00000457863 COLQQ9Y215 455 aaPredicted RBP8.68□□□□□ -1.02
HMGB3P30-201ENST00000457863 SLC24A1O60721 1099 aa8.67□□□□□ -1.02
HMGB3P30-201ENST00000457863 SEC24BO95487 1268 aa8.66□□□□□ -1.02
HMGB3P30-201ENST00000457863 SCUBE2Q9NQ36 999 aa8.65□□□□□ -1.02
HMGB3P30-201ENST00000457863 IRX5P78411 483 aaPredicted RBP8.64□□□□□ -1.03
HMGB3P30-201ENST00000457863 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
HMGB3P30-201ENST00000457863 CIZ1Q9ULV3 898 aaPredicted RBP8.63□□□□□ -1.03
HMGB3P30-201ENST00000457863 PLCG2P16885 1265 aa8.61□□□□□ -1.03
HMGB3P30-201ENST00000457863 PSEN1P49768 467 aa8.59□□□□□ -1.03
HMGB3P30-201ENST00000457863 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
HMGB3P30-201ENST00000457863 OCEL1Q9H607 264 aa8.58□□□□□ -1.04
HMGB3P30-201ENST00000457863 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
HMGB3P30-201ENST00000457863 MKRN3Q13064 507 aaKnown RBP8.53□□□□□ -1.04
HMGB3P30-201ENST00000457863 ILDR1Q86SU0 546 aaPredicted RBP8.53□□□□□ -1.04
HMGB3P30-201ENST00000457863 PDCD7Q8N8D1 485 aaKnown RBP8.53□□□□□ -1.04
HMGB3P30-201ENST00000457863 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P30-201ENST00000457863 RNF25Q96BH1 459 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P30-201ENST00000457863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGB3P30-201ENST00000457863 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
HMGB3P30-201ENST00000457863 CABP2Q9NPB3 220 aa8.47□□□□□ -1.05
HMGB3P30-201ENST00000457863 POTEMA6NI47 508 aa8.46□□□□□ -1.06
HMGB3P30-201ENST00000457863 SLAIN1Q8ND83 568 aa8.46□□□□□ -1.06
HMGB3P30-201ENST00000457863 POTEGQ6S5H5 508 aa8.45□□□□□ -1.06
HMGB3P30-201ENST00000457863 L3MBTL3Q96JM7 780 aaPredicted RBP8.45□□□□□ -1.06
HMGB3P30-201ENST00000457863 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P30-201ENST00000457863 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.43□□□□□ -1.06
HMGB3P30-201ENST00000457863 C3orf67Q6ZVT6 689 aa8.42□□□□□ -1.06
HMGB3P30-201ENST00000457863 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P30-201ENST00000457863 FAM163AQ96GL9 167 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P30-201ENST00000457863 ZFP91Q96JP5 570 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P30-201ENST00000457863 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
HMGB3P30-201ENST00000457863 TAOK2Q9UL54 1235 aa8.38□□□□□ -1.07
HMGB3P30-201ENST00000457863 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
HMGB3P30-201ENST00000457863 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
HMGB3P30-201ENST00000457863 BOLA1Q9Y3E2 137 aa8.36□□□□□ -1.07
HMGB3P30-201ENST00000457863 SNPHO15079 494 aa8.35□□□□□ -1.07
HMGB3P30-201ENST00000457863 SOX12O15370 315 aa8.35□□□□□ -1.07
HMGB3P30-201ENST00000457863 PKD2Q13563 968 aa8.35□□□□□ -1.07
HMGB3P30-201ENST00000457863 ST18O60284 1047 aa8.34□□□□□ -1.07
HMGB3P30-201ENST00000457863 ECM2O94769 699 aaPredicted RBP8.34□□□□□ -1.07
HMGB3P30-201ENST00000457863 TMEM121BQ9BXQ6 578 aaPredicted RBP8.34□□□□□ -1.07
HMGB3P30-201ENST00000457863 G3V3G9 751 aa8.33□□□□□ -1.08
HMGB3P30-201ENST00000457863 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P30-201ENST00000457863 MS4A4AQ96JQ5 239 aa8.3□□□□□ -1.08
HMGB3P30-201ENST00000457863 RGL2O15211 777 aa8.28□□□□□ -1.08
HMGB3P30-201ENST00000457863 MICALL2Q8IY33 904 aa8.28□□□□□ -1.08
HMGB3P30-201ENST00000457863 PHF8Q9UPP1 1060 aa8.28□□□□□ -1.08
HMGB3P30-201ENST00000457863 STK25O00506 426 aa8.27□□□□□ -1.09
HMGB3P30-201ENST00000457863 STK24Q9Y6E0 443 aa8.27□□□□□ -1.09
HMGB3P30-201ENST00000457863 NLRP6P59044 892 aa8.26□□□□□ -1.09
HMGB3P30-201ENST00000457863 FBXO22Q8NEZ5 403 aa8.26□□□□□ -1.09
HMGB3P30-201ENST00000457863 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
HMGB3P30-201ENST00000457863 MFRPQ9BY79 579 aa8.23□□□□□ -1.09
HMGB3P30-201ENST00000457863 HOXB3P14651 431 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P30-201ENST00000457863 TMEM92Q6UXU6 159 aa8.21□□□□□ -1.1
HMGB3P30-201ENST00000457863 CDAN1Q8IWY9 1227 aa8.21□□□□□ -1.1
HMGB3P30-201ENST00000457863 DOK7Q18PE1 504 aa8.19□□□□□ -1.1
HMGB3P30-201ENST00000457863 MARVELD3Q96A59 401 aa8.19□□□□□ -1.1
HMGB3P30-201ENST00000457863 EMP3P54852 163 aa8.18□□□□□ -1.1
HMGB3P30-201ENST00000457863 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
HMGB3P30-201ENST00000457863 HOXB1P14653 301 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms