RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 CDK11BP21127 795 aaKnown RBP16.43■□□□□ 0.22
NEDD4L-208ENST00000456173 BECN1Q14457 450 aa16.42■□□□□ 0.22
NEDD4L-208ENST00000456173 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
NEDD4L-208ENST00000456173 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-208ENST00000456173 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-208ENST00000456173 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.38■□□□□ 0.21
NEDD4L-208ENST00000456173 DNTTIP2Q5QJE6 756 aaKnown RBP16.36■□□□□ 0.21
NEDD4L-208ENST00000456173 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
NEDD4L-208ENST00000456173 ARID3AQ99856 593 aa16.32■□□□□ 0.2
NEDD4L-208ENST00000456173 NCLP19338 710 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-208ENST00000456173 PNNQ9H307 717 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-208ENST00000456173 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-208ENST00000456173 TIMELESSQ9UNS1 1208 aa16.28■□□□□ 0.2
NEDD4L-208ENST00000456173 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
NEDD4L-208ENST00000456173 HSP90AA2PQ14568 343 aaPredicted RBP16.25■□□□□ 0.19
NEDD4L-208ENST00000456173 GOLGA6L22H0YM25 854 aa16.25■□□□□ 0.19
NEDD4L-208ENST00000456173 L1TD1Q5T7N2 865 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-208ENST00000456173 RGS3P49796 1198 aa16.24■□□□□ 0.19
NEDD4L-208ENST00000456173 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
NEDD4L-208ENST00000456173 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-208ENST00000456173 PKNOX2Q96KN3 472 aa16.18■□□□□ 0.18
NEDD4L-208ENST00000456173 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
NEDD4L-208ENST00000456173 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
NEDD4L-208ENST00000456173 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
NEDD4L-208ENST00000456173 WDR43Q15061 677 aaKnown RBP eCLIP16.14■□□□□ 0.17
NEDD4L-208ENST00000456173 GZF1Q9H116 711 aaPredicted RBP16.14■□□□□ 0.17
NEDD4L-208ENST00000456173 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
NEDD4L-208ENST00000456173 SPRYD3Q8NCJ5 442 aa16.12■□□□□ 0.17
NEDD4L-208ENST00000456173 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
NEDD4L-208ENST00000456173 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
NEDD4L-208ENST00000456173 ARID3CA6NKF2 412 aa16.1■□□□□ 0.17
NEDD4L-208ENST00000456173 PLCB2Q00722 1185 aa16.09■□□□□ 0.17
NEDD4L-208ENST00000456173 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
NEDD4L-208ENST00000456173 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
NEDD4L-208ENST00000456173 CCER2I3L3R5 266 aa16.06■□□□□ 0.16
NEDD4L-208ENST00000456173 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
NEDD4L-208ENST00000456173 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
NEDD4L-208ENST00000456173 IL27Q8NEV9 243 aa16.05■□□□□ 0.16
NEDD4L-208ENST00000456173 GSE1Q14687 1217 aa16.05■□□□□ 0.16
NEDD4L-208ENST00000456173 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
NEDD4L-208ENST00000456173 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
NEDD4L-208ENST00000456173 USP35Q9P2H5 1018 aa16.02■□□□□ 0.16
NEDD4L-208ENST00000456173 GOLGA6L3A6NEY3 463 aa16.01■□□□□ 0.15
NEDD4L-208ENST00000456173 HSP90AB1P08238 724 aaKnown RBP15.99■□□□□ 0.15
NEDD4L-208ENST00000456173 KDM2AQ9Y2K7 1162 aa15.99■□□□□ 0.15
NEDD4L-208ENST00000456173 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
NEDD4L-208ENST00000456173 CEP162Q5TB80 1403 aa15.98■□□□□ 0.15
NEDD4L-208ENST00000456173 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
NEDD4L-208ENST00000456173 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
NEDD4L-208ENST00000456173 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
NEDD4L-208ENST00000456173 SLC4A3P48751 1232 aa15.95■□□□□ 0.14
NEDD4L-208ENST00000456173 TNNT3P45378 269 aaPredicted RBP15.94■□□□□ 0.14
NEDD4L-208ENST00000456173 CLIP1P30622 1438 aa15.93■□□□□ 0.14
NEDD4L-208ENST00000456173 HSCBQ8IWL3 235 aa15.92■□□□□ 0.14
NEDD4L-208ENST00000456173 MYH16Q9H6N6 1097 aa15.92■□□□□ 0.14
NEDD4L-208ENST00000456173 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
NEDD4L-208ENST00000456173 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
NEDD4L-208ENST00000456173 NACADO15069 1562 aa15.86■□□□□ 0.13
NEDD4L-208ENST00000456173 RRP7BPQ9NSQ0 103 aa15.85■□□□□ 0.13
NEDD4L-208ENST00000456173 FTSJ3Q8IY81 847 aaKnown RBP15.83■□□□□ 0.12
NEDD4L-208ENST00000456173 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
NEDD4L-208ENST00000456173 PDE4AP27815 886 aa15.82■□□□□ 0.12
NEDD4L-208ENST00000456173 KIAA2012Q0VF49 1180 aa15.82■□□□□ 0.12
NEDD4L-208ENST00000456173 NEUROD2Q15784 382 aa15.82■□□□□ 0.12
NEDD4L-208ENST00000456173 GBP4Q96PP9 640 aa15.81■□□□□ 0.12
NEDD4L-208ENST00000456173 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
NEDD4L-208ENST00000456173 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
NEDD4L-208ENST00000456173 FBLN2P98095 1184 aa15.78■□□□□ 0.12
NEDD4L-208ENST00000456173 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
NEDD4L-208ENST00000456173 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
NEDD4L-208ENST00000456173 NUDCQ9Y266 331 aa15.75■□□□□ 0.11
NEDD4L-208ENST00000456173 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
NEDD4L-208ENST00000456173 CASC1Q6TDU7 716 aa15.75■□□□□ 0.11
NEDD4L-208ENST00000456173 UBE2Q2Q8WVN8 375 aa15.73■□□□□ 0.11
NEDD4L-208ENST00000456173 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
NEDD4L-208ENST00000456173 HSPA5P11021 654 aaKnown RBP15.72■□□□□ 0.11
NEDD4L-208ENST00000456173 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
NEDD4L-208ENST00000456173 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
NEDD4L-208ENST00000456173 TNIKQ9UKE5 1360 aa15.71■□□□□ 0.1
NEDD4L-208ENST00000456173 MSH5O43196 834 aa15.7■□□□□ 0.1
NEDD4L-208ENST00000456173 ZNF771Q7L3S4 317 aaPredicted RBP15.7■□□□□ 0.1
NEDD4L-208ENST00000456173 CARD11Q9BXL7 1154 aa15.7■□□□□ 0.1
NEDD4L-208ENST00000456173 GOLGA6L6A8MZA4 724 aa15.69■□□□□ 0.1
NEDD4L-208ENST00000456173 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
NEDD4L-208ENST00000456173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.19e-7■■□□□ 14
NEDD4L-208ENST00000456173 FAM43AQ8N2R8 423 aa15.69■□□□□ 0.1
NEDD4L-208ENST00000456173 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
NEDD4L-208ENST00000456173 BAZ1BQ9UIG0 1483 aaKnown RBP15.68■□□□□ 0.1
NEDD4L-208ENST00000456173 KNSTRNQ9Y448 316 aa15.68■□□□□ 0.1
NEDD4L-208ENST00000456173 PTMSP20962 102 aa15.68■□□□□ 0.1
NEDD4L-208ENST00000456173 MFAP1P55081 439 aaKnown RBP15.67■□□□□ 0.1
NEDD4L-208ENST00000456173 NRDCO43847 1150 aa15.67■□□□□ 0.1
NEDD4L-208ENST00000456173 MTUS2Q5JR59 1369 aa15.67■□□□□ 0.1
NEDD4L-208ENST00000456173 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
NEDD4L-208ENST00000456173 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
NEDD4L-208ENST00000456173 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
NEDD4L-208ENST00000456173 EXOC6Q8TAG9 804 aa15.64■□□□□ 0.09
NEDD4L-208ENST00000456173 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
NEDD4L-208ENST00000456173 FAM161AQ3B820 660 aa15.61■□□□□ 0.09
NEDD4L-208ENST00000456173 DDX11L8A8MPP1 907 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms