RNA–Protein interactions for RNA: ENST00000454516.6

CNOT10-206, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2 BASIC

Gene CNOT10, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-206ENST00000454516 LOC105371045A0A1W2PR82 267 aa6.08□□□□□ -1.44
CNOT10-206ENST00000454516 UBTFP17480 764 aaKnown RBP6.07□□□□□ -1.44
CNOT10-206ENST00000454516 SOCS7O14512 581 aa6.06□□□□□ -1.44
CNOT10-206ENST00000454516 NCAPD3P42695 1498 aa6.05□□□□□ -1.44
CNOT10-206ENST00000454516 HMGXB3Q12766 1538 aa6.05□□□□□ -1.44
CNOT10-206ENST00000454516 CCDC88BA6NC98 1476 aa6.04□□□□□ -1.44
CNOT10-206ENST00000454516 BAZ1BQ9UIG0 1483 aaKnown RBP6.04□□□□□ -1.44
CNOT10-206ENST00000454516 LMTK3Q96Q04 1460 aa6.01□□□□□ -1.45
CNOT10-206ENST00000454516 ANP32EQ9BTT0 268 aa6□□□□□ -1.45
CNOT10-206ENST00000454516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.98□□□□□ -1.458e-6■□□□□ 8.2
CNOT10-206ENST00000454516 ANO8Q9HCE9 1232 aaPredicted RBP5.97□□□□□ -1.45
CNOT10-206ENST00000454516 RNF39Q9H2S5 420 aa5.97□□□□□ -1.45
CNOT10-206ENST00000454516 FOXD4L1Q9NU39 408 aa5.96□□□□□ -1.45
CNOT10-206ENST00000454516 YTHDC1Q96MU7 727 aaKnown RBP5.95□□□□□ -1.46
CNOT10-206ENST00000454516 ABCC8Q09428 1581 aa5.94□□□□□ -1.46
CNOT10-206ENST00000454516 SLC4A2P04920 1241 aa5.93□□□□□ -1.46
CNOT10-206ENST00000454516 ERCC6Q03468 1493 aa5.93□□□□□ -1.46
CNOT10-206ENST00000454516 PRDM2Q13029 1718 aa5.93□□□□□ -1.46
CNOT10-206ENST00000454516 NBR1Q14596 966 aa5.92□□□□□ -1.46
CNOT10-206ENST00000454516 PDIA4P13667 645 aaKnown RBP5.91□□□□□ -1.46
CNOT10-206ENST00000454516 CFTRP13569 1480 aa5.91□□□□□ -1.46
CNOT10-206ENST00000454516 CCDC136Q96JN2 1154 aa5.9□□□□□ -1.46
CNOT10-206ENST00000454516 TRHP20396 242 aaPredicted RBP5.9□□□□□ -1.47
CNOT10-206ENST00000454516 C1QBPQ07021 282 aaKnown RBP5.89□□□□□ -1.47
CNOT10-206ENST00000454516 CHMP4AQ9BY43 222 aa5.89□□□□□ -1.47
CNOT10-206ENST00000454516 ZEB1P37275 1124 aaPredicted RBP5.89□□□□□ -1.47
CNOT10-206ENST00000454516 FBXO41Q8TF61 875 aa5.89□□□□□ -1.47
CNOT10-206ENST00000454516 CDK11BP21127 795 aaKnown RBP5.89□□□□□ -1.47
CNOT10-206ENST00000454516 CDK11AQ9UQ88 783 aaPredicted RBP5.89□□□□□ -1.47
CNOT10-206ENST00000454516 U3KPZ7 1027 aaPredicted RBP5.88□□□□□ -1.47
CNOT10-206ENST00000454516 PAXIP1Q6ZW49 1069 aaPredicted RBP5.88□□□□□ -1.47
CNOT10-206ENST00000454516 CCDC9Q9Y3X0 531 aaKnown RBP5.88□□□□□ -1.47
CNOT10-206ENST00000454516 NESP48681 1621 aa5.87□□□□□ -1.47
CNOT10-206ENST00000454516 SAMD1Q6SPF0 538 aaPredicted RBP5.87□□□□□ -1.47
CNOT10-206ENST00000454516 CADPSQ9ULU8 1353 aa5.87□□□□□ -1.47
CNOT10-206ENST00000454516 IGSF3O75054 1194 aa5.87□□□□□ -1.47
CNOT10-206ENST00000454516 CACNB1Q02641 598 aaPredicted RBP5.86□□□□□ -1.47
CNOT10-206ENST00000454516 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.86□□□□□ -1.47
CNOT10-206ENST00000454516 SYNJ1O43426 1573 aa5.86□□□□□ -1.47
CNOT10-206ENST00000454516 BBXQ8WY36 941 aaPredicted RBP5.86□□□□□ -1.47
CNOT10-206ENST00000454516 BIVM-ERCC5R4GMW8 1640 aa5.86□□□□□ -1.47
CNOT10-206ENST00000454516 WRNQ14191 1432 aaPredicted RBP eCLIP5.85□□□□□ -1.47
CNOT10-206ENST00000454516 HMGB1P09429 215 aaKnown RBP5.85□□□□□ -1.47
CNOT10-206ENST00000454516 TSHZ2Q9NRE2 1034 aa5.85□□□□□ -1.47
CNOT10-206ENST00000454516 UBE2Q2Q8WVN8 375 aa5.85□□□□□ -1.47
CNOT10-206ENST00000454516 TOP2BQ02880 1626 aa5.85□□□□□ -1.47
CNOT10-206ENST00000454516 RUSC2Q8N2Y8 1516 aa5.85□□□□□ -1.47
CNOT10-206ENST00000454516 CFAP44Q96MT7 982 aa5.84□□□□□ -1.47
CNOT10-206ENST00000454516 LAMC3Q9Y6N6 1575 aa5.84□□□□□ -1.47
CNOT10-206ENST00000454516 HSP90B1P14625 803 aaKnown RBP5.84□□□□□ -1.48
CNOT10-206ENST00000454516 SALL2Q9Y467 1007 aaPredicted RBP5.84□□□□□ -1.48
CNOT10-206ENST00000454516 RIMBP3CA6NJZ7 1639 aa5.83□□□□□ -1.48
CNOT10-206ENST00000454516 RIMBP3BA6NNM3 1639 aa5.83□□□□□ -1.48
CNOT10-206ENST00000454516 RIMBP3Q9UFD9 1639 aa5.83□□□□□ -1.48
CNOT10-206ENST00000454516 ERCC6L2Q5T890 1561 aa5.83□□□□□ -1.48
CNOT10-206ENST00000454516 SOGA1O94964 1423 aa5.83□□□□□ -1.48
CNOT10-206ENST00000454516 DIEXFQ68CQ4 756 aaKnown RBP5.83□□□□□ -1.48
CNOT10-206ENST00000454516 CUX1P39880 1505 aa5.82□□□□□ -1.48
CNOT10-206ENST00000454516 ILDR2Q71H61 639 aa5.82□□□□□ -1.48
CNOT10-206ENST00000454516 FANCD2Q9BXW9 1451 aa5.8□□□□□ -1.48
CNOT10-206ENST00000454516 MYCNP04198 464 aaPredicted RBP5.8□□□□□ -1.48
CNOT10-206ENST00000454516 BRD2P25440 801 aaKnown RBP5.8□□□□□ -1.48
CNOT10-206ENST00000454516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.79□□□□□ -1.48
CNOT10-206ENST00000454516 PKD2Q13563 968 aa5.79□□□□□ -1.48
CNOT10-206ENST00000454516 HNRNPUL2Q1KMD3 747 aaKnown RBP5.79□□□□□ -1.48
CNOT10-206ENST00000454516 OSCARQ8IYS5 282 aa5.79□□□□□ -1.48
CNOT10-206ENST00000454516 NPM1P06748 294 aaKnown RBP eCLIP5.79□□□□□ -1.48
CNOT10-206ENST00000454516 EEA1Q15075 1411 aa5.79□□□□□ -1.48
CNOT10-206ENST00000454516 P3H3Q8IVL6 736 aa5.78□□□□□ -1.48
CNOT10-206ENST00000454516 PUS7Q96PZ0 661 aaKnown RBP5.78□□□□□ -1.48
CNOT10-206ENST00000454516 KIF21AQ7Z4S6 1674 aa5.77□□□□□ -1.49
CNOT10-206ENST00000454516 DNMBPQ6XZF7 1577 aa5.77□□□□□ -1.49
CNOT10-206ENST00000454516 ZBTB7CA1YPR0 619 aa5.77□□□□□ -1.49
CNOT10-206ENST00000454516 ARID3CA6NKF2 412 aa5.77□□□□□ -1.49
CNOT10-206ENST00000454516 PDS5BQ9NTI5 1447 aa5.76□□□□□ -1.49
CNOT10-206ENST00000454516 ATP1B4Q9UN42 357 aaPredicted RBP5.76□□□□□ -1.49
CNOT10-206ENST00000454516 CEP164Q9UPV0 1460 aa5.76□□□□□ -1.49
CNOT10-206ENST00000454516 DHX37Q8IY37 1157 aaKnown RBP5.75□□□□□ -1.49
CNOT10-206ENST00000454516 TOPBP1Q92547 1522 aa5.75□□□□□ -1.49
CNOT10-206ENST00000454516 NECTIN2Q92692 538 aa5.75□□□□□ -1.49
CNOT10-206ENST00000454516 URB2Q14146 1524 aaKnown RBP5.74□□□□□ -1.49
CNOT10-206ENST00000454516 FGD5Q6ZNL6 1462 aa5.74□□□□□ -1.49
CNOT10-206ENST00000454516 DISP3Q9P2K9 1392 aa5.74□□□□□ -1.49
CNOT10-206ENST00000454516 KIF21BO75037 1637 aa5.74□□□□□ -1.49
CNOT10-206ENST00000454516 BRPF1P55201 1214 aaPredicted RBP5.73□□□□□ -1.49
CNOT10-206ENST00000454516 PDE4CQ08493 712 aa5.73□□□□□ -1.49
CNOT10-206ENST00000454516 SPINK5Q9NQ38 1064 aaPredicted RBP5.73□□□□□ -1.49
CNOT10-206ENST00000454516 RAD54L2Q9Y4B4 1467 aa5.73□□□□□ -1.49
CNOT10-206ENST00000454516 SPRYD3Q8NCJ5 442 aa5.72□□□□□ -1.49
CNOT10-206ENST00000454516 WDR97A6NE52 1622 aa5.72□□□□□ -1.49
CNOT10-206ENST00000454516 THOC2Q8NI27 1593 aaKnown RBP5.72□□□□□ -1.49
CNOT10-206ENST00000454516 TDRD9Q8NDG6 1382 aaKnown RBP5.72□□□□□ -1.49
CNOT10-206ENST00000454516 SUPT16HQ9Y5B9 1047 aaKnown RBP5.72□□□□□ -1.49
CNOT10-206ENST00000454516 CAPN15O75808 1086 aa5.72□□□□□ -1.49
CNOT10-206ENST00000454516 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
CNOT10-206ENST00000454516 POLA1P09884 1462 aaPredicted RBP5.71□□□□□ -1.5
CNOT10-206ENST00000454516 ARHGEF11O15085 1522 aa5.71□□□□□ -1.5
CNOT10-206ENST00000454516 ABCA10Q8WWZ4 1543 aa5.71□□□□□ -1.5
CNOT10-206ENST00000454516 KIF27Q86VH2 1401 aa5.71□□□□□ -1.5
CNOT10-206ENST00000454516 MRC2Q9UBG0 1479 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms