RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CHIC2Q9UKJ5 165 aa19.11■□□□□ 0.65
UBE2D3-210ENST00000453744 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
UBE2D3-210ENST00000453744 SETD5Q9C0A6 1442 aa19.1■□□□□ 0.65
UBE2D3-210ENST00000453744 CCER2I3L3R5 266 aa19.1■□□□□ 0.65
UBE2D3-210ENST00000453744 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
UBE2D3-210ENST00000453744 ARID3CA6NKF2 412 aa19.09■□□□□ 0.65
UBE2D3-210ENST00000453744 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.65
UBE2D3-210ENST00000453744 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
UBE2D3-210ENST00000453744 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
UBE2D3-210ENST00000453744 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
UBE2D3-210ENST00000453744 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
UBE2D3-210ENST00000453744 MSH5O43196 834 aa19.02■□□□□ 0.64
UBE2D3-210ENST00000453744 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
UBE2D3-210ENST00000453744 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
UBE2D3-210ENST00000453744 DEKP35659 375 aaKnown RBP18.99■□□□□ 0.63
UBE2D3-210ENST00000453744 PPP4R2Q9NY27 417 aa18.99■□□□□ 0.63
UBE2D3-210ENST00000453744 ANP32AP39687 249 aaKnown RBP18.97■□□□□ 0.63
UBE2D3-210ENST00000453744 CCDC136Q96JN2 1154 aa18.96■□□□□ 0.63
UBE2D3-210ENST00000453744 RRBP1Q9P2E9 1410 aaKnown RBP18.94■□□□□ 0.62
UBE2D3-210ENST00000453744 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
UBE2D3-210ENST00000453744 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
UBE2D3-210ENST00000453744 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
UBE2D3-210ENST00000453744 HSPA5P11021 654 aaKnown RBP18.91■□□□□ 0.62
UBE2D3-210ENST00000453744 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
UBE2D3-210ENST00000453744 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
UBE2D3-210ENST00000453744 PHLDB1Q86UU1 1377 aa18.88■□□□□ 0.61
UBE2D3-210ENST00000453744 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
UBE2D3-210ENST00000453744 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
UBE2D3-210ENST00000453744 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
UBE2D3-210ENST00000453744 RTN4Q9NQC3 1192 aaKnown RBP18.86■□□□□ 0.61
UBE2D3-210ENST00000453744 CUX2O14529 1486 aa18.86■□□□□ 0.61
UBE2D3-210ENST00000453744 FOXD1Q16676 465 aa18.85■□□□□ 0.61
UBE2D3-210ENST00000453744 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
UBE2D3-210ENST00000453744 FANCIQ9NVI1 1328 aa18.84■□□□□ 0.61
UBE2D3-210ENST00000453744 MYT1LQ9UL68 1186 aa18.83■□□□□ 0.61
UBE2D3-210ENST00000453744 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
UBE2D3-210ENST00000453744 CCDC184Q52MB2 194 aa18.8■□□□□ 0.6
UBE2D3-210ENST00000453744 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
UBE2D3-210ENST00000453744 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
UBE2D3-210ENST00000453744 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
UBE2D3-210ENST00000453744 FHOD3Q2V2M9 1422 aa18.75■□□□□ 0.59
UBE2D3-210ENST00000453744 TMC1Q8TDI8 760 aa18.74■□□□□ 0.59
UBE2D3-210ENST00000453744 FHAD1B1AJZ9 1412 aa18.73■□□□□ 0.59
UBE2D3-210ENST00000453744 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
UBE2D3-210ENST00000453744 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
UBE2D3-210ENST00000453744 WASHC2AQ641Q2 1341 aa18.7■□□□□ 0.58
UBE2D3-210ENST00000453744 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
UBE2D3-210ENST00000453744 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
UBE2D3-210ENST00000453744 PRKRIP1Q9H875 184 aaPredicted RBP18.68■□□□□ 0.58
UBE2D3-210ENST00000453744 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
UBE2D3-210ENST00000453744 IGF1RP08069 1367 aa18.68■□□□□ 0.58
UBE2D3-210ENST00000453744 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
UBE2D3-210ENST00000453744 ZNF777Q9ULD5 760 aaPredicted RBP18.66■□□□□ 0.58
UBE2D3-210ENST00000453744 ERICH6BQ5W0A0 696 aa18.66■□□□□ 0.58
UBE2D3-210ENST00000453744 TOP2BQ02880 1626 aa18.64■□□□□ 0.57
UBE2D3-210ENST00000453744 EIF5BO60841 1220 aaKnown RBP18.62■□□□□ 0.57
UBE2D3-210ENST00000453744 KDM2AQ9Y2K7 1162 aa18.62■□□□□ 0.57
UBE2D3-210ENST00000453744 CCDC18Q5T9S5 1454 aa18.62■□□□□ 0.57
UBE2D3-210ENST00000453744 NEFMP07197 916 aa18.61■□□□□ 0.57
UBE2D3-210ENST00000453744 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
UBE2D3-210ENST00000453744 IPO9Q96P70 1041 aaKnown RBP18.59■□□□□ 0.57
UBE2D3-210ENST00000453744 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
UBE2D3-210ENST00000453744 CUX1P39880 1505 aa18.56■□□□□ 0.56
UBE2D3-210ENST00000453744 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
UBE2D3-210ENST00000453744 C11orf95C9JLR9 678 aaPredicted RBP18.55■□□□□ 0.56
UBE2D3-210ENST00000453744 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
UBE2D3-210ENST00000453744 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
UBE2D3-210ENST00000453744 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
UBE2D3-210ENST00000453744 ANO8Q9HCE9 1232 aaPredicted RBP18.52■□□□□ 0.56
UBE2D3-210ENST00000453744 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
UBE2D3-210ENST00000453744 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
UBE2D3-210ENST00000453744 UACAQ9BZF9 1416 aa18.5■□□□□ 0.55
UBE2D3-210ENST00000453744 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
UBE2D3-210ENST00000453744 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
UBE2D3-210ENST00000453744 CCDC7Q96M83 1385 aa18.47■□□□□ 0.55
UBE2D3-210ENST00000453744 KIF7Q2M1P5 1343 aa18.46■□□□□ 0.55
UBE2D3-210ENST00000453744 CNTLNQ9NXG0 1405 aa18.45■□□□□ 0.54
UBE2D3-210ENST00000453744 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
UBE2D3-210ENST00000453744 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
UBE2D3-210ENST00000453744 NBPF8Q3BBV2 869 aa18.44■□□□□ 0.54
UBE2D3-210ENST00000453744 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
UBE2D3-210ENST00000453744 ARXQ96QS3 562 aa18.41■□□□□ 0.54
UBE2D3-210ENST00000453744 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
UBE2D3-210ENST00000453744 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
UBE2D3-210ENST00000453744 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
UBE2D3-210ENST00000453744 PLIN1O60240 522 aa18.38■□□□□ 0.53
UBE2D3-210ENST00000453744 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
UBE2D3-210ENST00000453744 PDE4AP27815 886 aa18.37■□□□□ 0.53
UBE2D3-210ENST00000453744 PPM1GO15355 546 aaPredicted RBP18.36■□□□□ 0.53
UBE2D3-210ENST00000453744 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
UBE2D3-210ENST00000453744 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
UBE2D3-210ENST00000453744 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
UBE2D3-210ENST00000453744 HFM1A2PYH4 1435 aa18.35■□□□□ 0.53
UBE2D3-210ENST00000453744 NAIPQ13075 1403 aa18.35■□□□□ 0.53
UBE2D3-210ENST00000453744 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
UBE2D3-210ENST00000453744 PRKCSHP14314 528 aaPredicted RBP18.35■□□□□ 0.53
UBE2D3-210ENST00000453744 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
UBE2D3-210ENST00000453744 FBLN2P98095 1184 aa18.34■□□□□ 0.53
UBE2D3-210ENST00000453744 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
UBE2D3-210ENST00000453744 RGS3P49796 1198 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms